Gene annotation
Transcriptome id Sobic.004G080200.1
Synonym Sb04g006630
Functional annotation 3-oxoacyl-synthase, putative, expressed
UniProt A0A194YNB6
Pfam PF02801 PF00109
Panther DB PTHR11712 PTHR11712:SF275
NCBI CDD -
KEGG Orthology K09458; fabF, OXSM, 3-oxoacyl-[acyl-carrier-protein] synthase II
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G04540 : Beta-ketoacyl synthase
RAP-DB (Rice) LOC_Os02g10320.1 : 3-oxoacyl-synthase, putative, expressed
MaizeGDB (Corn) Zm00025a019623
Brachypodium KQJ93865
Barley HORVU6Hr1G033320.19 , HORVU6Hr1G033320.31 , HORVU6Hr1G033320.30 , HORVU6Hr1G033320.9 , HORVU6Hr1G033320.8 , HORVU6Hr1G033320.7 , HORVU6Hr1G033320.6 , HORVU6Hr1G033320.5 , HORVU6Hr1G033320.4 , HORVU6Hr1G033320.3 , HORVU6Hr1G033320.2 , HORVU6Hr1G033320.1 , HORVU6Hr1G033320.28 , HORVU6Hr1G033320.29 , HORVU6Hr1G033320.26 , HORVU6Hr1G033320.27 , HORVU6Hr1G033320.24 , HORVU6Hr1G033320.25 , HORVU6Hr1G033320.22 , HORVU6Hr1G033320.23 , HORVU6Hr1G033320.20 , HORVU6Hr1G033320.21 , HORVU6Hr1G033320.17 , HORVU6Hr1G033320.16 , HORVU6Hr1G033320.14 , HORVU6Hr1G033320.13 , HORVU6Hr1G033320.12 , HORVU6Hr1G033320.11 , HORVU6Hr1G033320.10 , HORVU6Hr1G033320.18
Wheat TraesCS6B02G192100 , TraesCS6D02G153300 , TraesCS6A02G159200
Populus PNT51009 , PNT51010


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cDNA sequences
Sobic.004G080200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G064000 expressed protein -
2 Sobic.006G130800 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
3 Sobic.010G163100 ribosomal protein L5, putative, expressed K02868: RP-L11e, large subunit ribosomal protein L11e
4 Sobic.001G249700 expressed protein K11877: PSMG3, proteasome assembly chaperone 3
5 Sobic.010G219400 endonuclease V, putative, expressed -
6 Sobic.004G210800 iron-stress related protein, putative, expressed -
7 Sobic.004G296500 serine esterase family protein, putative, expressed -
8 Sobic.004G176400 ATP binding protein, putative, expressed K06883: uncharacterized protein
9 Sobic.004G156800 RNA pseudouridine synthase, putative, expressed -
10 Sobic.001G515000 protein-S-isoprenylcysteine O-methyltransferase. tax, putative, expressed K00587: ICMT, protein-S-isoprenylcysteine O-methyltransferase
11 Sobic.010G237900 RNA recognition motif containing protein, putative, expressed -
12 Sobic.008G035501 - -
13 Sobic.006G073200 OTU-like cysteine protease family protein, putative, expressed K12655: OTUD5, OTU domain-containing protein 5
14 Sobic.002G006401 - K11799: DDB1- and CUL4-associated factor 4
15 Sobic.009G195300 DUF803 domain containing, putative, expressed -
16 Sobic.004G311900 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K13414: mitogen-activated protein kinase kinase kinase 1
17 Sobic.007G165900 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
18 Sobic.001G362200 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
19 Sobic.004G286500 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
20 Sobic.010G239800 hydrolase, NUDIX family, domain containing protein, expressed K12613: mRNA-decapping enzyme subunit 2


Gene co-expression network
sample Sobic004G080200 Sobic004G080200 Sobic001G064000 Sobic001G064000 Sobic004G080200--Sobic001G064000 Sobic006G130800 Sobic006G130800 Sobic004G080200--Sobic006G130800 Sobic010G163100 Sobic010G163100 Sobic004G080200--Sobic010G163100 Sobic001G249700 Sobic001G249700 Sobic004G080200--Sobic001G249700 Sobic010G219400 Sobic010G219400 Sobic004G080200--Sobic010G219400 Sobic004G210800 Sobic004G210800 Sobic004G080200--Sobic004G210800 Sobic004G296500 Sobic004G296500 Sobic004G080200--Sobic004G296500 Sobic004G176400 Sobic004G176400 Sobic004G080200--Sobic004G176400 Sobic004G156800 Sobic004G156800 Sobic004G080200--Sobic004G156800 Sobic007G029700 Sobic007G029700 Sobic001G064000--Sobic007G029700 Sobic010G145800 Sobic010G145800 Sobic001G064000--Sobic010G145800 Sobic007G203200 Sobic007G203200 Sobic001G064000--Sobic007G203200 Sobic010G237900 Sobic010G237900 Sobic001G064000--Sobic010G237900 Sobic007G136800 Sobic007G136800 Sobic001G064000--Sobic007G136800 Sobic001G064000--Sobic006G130800 Sobic001G043800 Sobic001G043800 Sobic001G064000--Sobic001G043800 Sobic007G095500 Sobic007G095500 Sobic001G064000--Sobic007G095500 Sobic001G250700 Sobic001G250700 Sobic001G064000--Sobic001G250700 Sobic006G130800--Sobic001G043800 Sobic001G186800 Sobic001G186800 Sobic006G130800--Sobic001G186800 Sobic002G134600 Sobic002G134600 Sobic006G130800--Sobic002G134600 Sobic002G294800 Sobic002G294800 Sobic006G130800--Sobic002G294800 Sobic006G130800--Sobic001G064000 Sobic001G048100 Sobic001G048100 Sobic006G130800--Sobic001G048100 Sobic002G122600 Sobic002G122600 Sobic006G130800--Sobic002G122600 Sobic003G290100 Sobic003G290100 Sobic006G130800--Sobic003G290100 Sobic001G339500 Sobic001G339500 Sobic006G130800--Sobic001G339500 Sobic006G011000 Sobic006G011000 Sobic010G163100--Sobic006G011000 Sobic002G204000 Sobic002G204000 Sobic010G163100--Sobic002G204000 Sobic001G487100 Sobic001G487100 Sobic010G163100--Sobic001G487100 Sobic003G122000 Sobic003G122000 Sobic010G163100--Sobic003G122000 Sobic003G121300 Sobic003G121300 Sobic010G163100--Sobic003G121300 Sobic010G220900 Sobic010G220900 Sobic010G163100--Sobic010G220900 Sobic010G163100--Sobic001G249700 Sobic010G163100--Sobic004G156800 Sobic009G258400 Sobic009G258400 Sobic010G163100--Sobic009G258400 Sobic009G033900 Sobic009G033900 Sobic001G249700--Sobic009G033900 Sobic010G247400 Sobic010G247400 Sobic001G249700--Sobic010G247400 Sobic009G164000 Sobic009G164000 Sobic001G249700--Sobic009G164000 Sobic001G249700--Sobic004G156800 Sobic002G256200 Sobic002G256200 Sobic001G249700--Sobic002G256200 Sobic001G259000 Sobic001G259000 Sobic001G249700--Sobic001G259000 Sobic006G270600 Sobic006G270600 Sobic001G249700--Sobic006G270600 Sobic001G168900 Sobic001G168900 Sobic001G249700--Sobic001G168900 Sobic004G356900 Sobic004G356900 Sobic001G249700--Sobic004G356900 Sobic006G200600 Sobic006G200600 Sobic010G219400--Sobic006G200600 Sobic003G266001 Sobic003G266001 Sobic010G219400--Sobic003G266001 Sobic010G118000 Sobic010G118000 Sobic010G219400--Sobic010G118000 Sobic008G179700 Sobic008G179700 Sobic010G219400--Sobic008G179700 Sobic003G401100 Sobic003G401100 Sobic010G219400--Sobic003G401100 Sobic007G078600 Sobic007G078600 Sobic010G219400--Sobic007G078600 Sobic007G075900 Sobic007G075900 Sobic010G219400--Sobic007G075900 Sobic008G089100 Sobic008G089100 Sobic010G219400--Sobic008G089100 Sobic001G281600 Sobic001G281600 Sobic010G219400--Sobic001G281600 Sobic001G386300 Sobic001G386300 Sobic004G210800--Sobic001G386300 Sobic004G210800--Sobic004G156800 Sobic006G252100 Sobic006G252100 Sobic004G210800--Sobic006G252100 Sobic004G210800--Sobic010G219400 Sobic008G047300 Sobic008G047300 Sobic004G210800--Sobic008G047300 Sobic001G031100 Sobic001G031100 Sobic004G210800--Sobic001G031100 Sobic001G002600 Sobic001G002600 Sobic004G210800--Sobic001G002600 Sobic010G057900 Sobic010G057900 Sobic004G210800--Sobic010G057900 Sobic007G053500 Sobic007G053500 Sobic004G210800--Sobic007G053500 Sobic009G001800 Sobic009G001800 Sobic004G296500--Sobic009G001800 Sobic003G383300 Sobic003G383300 Sobic004G296500--Sobic003G383300 Sobic002G294500 Sobic002G294500 Sobic004G296500--Sobic002G294500 Sobic004G296500--Sobic006G200600 Sobic003G445100 Sobic003G445100 Sobic004G296500--Sobic003G445100 Sobic006G258500 Sobic006G258500 Sobic004G296500--Sobic006G258500 Sobic004G296500--Sobic004G080200 Sobic004G296500--Sobic007G095500 Sobic001G484700 Sobic001G484700 Sobic004G296500--Sobic001G484700 Sobic004G176400--Sobic009G164000 Sobic006G101700 Sobic006G101700 Sobic004G176400--Sobic006G101700 Sobic004G176400--Sobic004G156800 Sobic004G353000 Sobic004G353000 Sobic004G176400--Sobic004G353000 Sobic008G092300 Sobic008G092300 Sobic004G176400--Sobic008G092300 Sobic007G184500 Sobic007G184500 Sobic004G176400--Sobic007G184500 Sobic009G143800 Sobic009G143800 Sobic004G176400--Sobic009G143800 Sobic001G360200 Sobic001G360200 Sobic004G176400--Sobic001G360200 Sobic006G278700 Sobic006G278700 Sobic004G176400--Sobic006G278700 Sobic007G102700 Sobic007G102700 Sobic004G156800--Sobic007G102700 Sobic004G156800--Sobic010G237900 Sobic004G156800--Sobic001G259000 Sobic001G527300 Sobic001G527300 Sobic004G156800--Sobic001G527300 Sobic004G129300 Sobic004G129300 Sobic004G156800--Sobic004G129300 Sobic001G114500 Sobic001G114500 Sobic004G156800--Sobic001G114500 Sobic004G156800--Sobic009G164000 Sobic010G007100 Sobic010G007100 Sobic004G156800--Sobic010G007100 Sobic006G204800 Sobic006G204800 Sobic004G156800--Sobic006G204800
Octagon: transcription factors


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