Gene annotation
Transcriptome id Sobic.004G104700.2,Sobic.004G104700.1
Synonym ASP1, Sb04g008560
Functional annotation aminotransferase, classes I and II, domain containing protein, expressed
UniProt A0A194YNT6 , A0A194YNT9
Pfam PF00155
Panther DB PTHR11879 PTHR11879:SF18
NCBI CDD KOG1411; Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2
KEGG Orthology K14455; aspartate aminotransferase, mitochondrial
Gene Ontology GO:0009058; biosynthetic process GO:0008483transaminase activity GO:0006520cellular amino acid metabolic process


Orthologs (automatic annotation)
TAIR AT2G30970 : aspartate aminotransferase 1
RAP-DB (Rice) LOC_Os02g14110.1 : aminotransferase, classes I and II, domain containing protein, expressed
MaizeGDB (Corn) Zm00025a020031
Brachypodium KQJ94182 , PNT66254
Barley HORVU2Hr1G033320.3 , HORVU2Hr1G033320.2 , HORVU2Hr1G033320.1 , HORVU2Hr1G033320.4 , HORVU6Hr1G003470.4 , HORVU6Hr1G003470.5 , HORVU6Hr1G003470.1 , HORVU6Hr1G003470.2 , HORVU6Hr1G003470.3 , HORVU7Hr1G010790.1 , HORVU7Hr1G010790.3
Wheat TraesCS6A02G018600 , TraesCS6B02G026900 , TraesCS7A02G353500 , TraesCS7D02G369300 , TraesCS7B02G274100 , TraesCS6D02G022800 , TraesCS3B02G331100 , TraesCS3B02G331100
Populus -


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cDNA sequences
Sobic.004G104700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G282200 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit precursor, putative, expressed K12666: OST1, oligosaccharyltransferase complex subunit alpha (ribophorin I)
2 Sobic.005G112100 ER lumen protein retaining receptor, putative, expressed K10949: ER lumen protein retaining receptor
3 Sobic.004G282100 peptidase, putative, expressed K06013: STE24 endopeptidase
4 Sobic.004G154300 ThiF family domain containing protein, putative, expressed K12164: UBA5, ubiquitin-like modifier-activating enzyme 5
5 Sobic.003G150900 protein transport protein-related, putative, expressed -
6 Sobic.003G008600 eukaryotic translation initiation factor 3 subunit E-interacting protein, putative, expressed K15029: translation initiation factor 3 subunit L
7 Sobic.002G199400 growth regulator related protein, putative, expressed -
8 Sobic.002G125800 phosphoglucomutase, putative, expressed -
9 Sobic.008G019532 - -
10 Sobic.002G208400 regulator protein, putative, expressed -
11 Sobic.006G095200 signal peptidase complex subunit 2, putative, expressed K12947: SPCS2, signal peptidase complex subunit 2
12 Sobic.007G208000 geranylgeranyl transferase type-2 subunit beta, putative, expressed K05956: geranylgeranyl transferase type-2 subunit beta
13 Sobic.009G112300 kinase, pfkB family, putative, expressed -
14 Sobic.005G114800 protein transport protein, putative, expressed K14007: protein transport protein SEC24
15 Sobic.005G178300 peptidyl-prolyl cis-trans isomerase, putative, expressed -
16 Sobic.006G259900 reticulon domain containing protein, putative, expressed -
17 Sobic.002G343200 homeodomain-like, putative, expressed -
18 Sobic.006G203100 expressed protein -
19 Sobic.003G304400 NLI interacting factor-like phosphatase, putative, expressed K17496: mitochondrial import inner membrane translocase subunit TIM50
20 Sobic.010G192600 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1


Gene co-expression network
sample Sobic004G104700 Sobic004G104700 Sobic006G282200 Sobic006G282200 Sobic004G104700--Sobic006G282200 Sobic005G112100 Sobic005G112100 Sobic004G104700--Sobic005G112100 Sobic004G282100 Sobic004G282100 Sobic004G104700--Sobic004G282100 Sobic004G154300 Sobic004G154300 Sobic004G104700--Sobic004G154300 Sobic003G150900 Sobic003G150900 Sobic004G104700--Sobic003G150900 Sobic003G008600 Sobic003G008600 Sobic004G104700--Sobic003G008600 Sobic002G199400 Sobic002G199400 Sobic004G104700--Sobic002G199400 Sobic002G125800 Sobic002G125800 Sobic004G104700--Sobic002G125800 Sobic008G019532 Sobic008G019532 Sobic004G104700--Sobic008G019532 Sobic006G265600 Sobic006G265600 Sobic006G282200--Sobic006G265600 Sobic003G397900 Sobic003G397900 Sobic006G282200--Sobic003G397900 Sobic010G192600 Sobic010G192600 Sobic006G282200--Sobic010G192600 Sobic001G474400 Sobic001G474400 Sobic006G282200--Sobic001G474400 Sobic003G304400 Sobic003G304400 Sobic006G282200--Sobic003G304400 Sobic002G343200 Sobic002G343200 Sobic006G282200--Sobic002G343200 Sobic006G282200--Sobic002G199400 Sobic006G282200--Sobic003G150900 Sobic004G151200 Sobic004G151200 Sobic006G282200--Sobic004G151200 Sobic002G222200 Sobic002G222200 Sobic005G112100--Sobic002G222200 Sobic010G258000 Sobic010G258000 Sobic005G112100--Sobic010G258000 Sobic007G119600 Sobic007G119600 Sobic005G112100--Sobic007G119600 Sobic001G473400 Sobic001G473400 Sobic005G112100--Sobic001G473400 Sobic005G178300 Sobic005G178300 Sobic005G112100--Sobic005G178300 Sobic003G388700 Sobic003G388700 Sobic005G112100--Sobic003G388700 Sobic002G186300 Sobic002G186300 Sobic005G112100--Sobic002G186300 Sobic001G073600 Sobic001G073600 Sobic005G112100--Sobic001G073600 Sobic008G150300 Sobic008G150300 Sobic005G112100--Sobic008G150300 Sobic006G139100 Sobic006G139100 Sobic004G282100--Sobic006G139100 Sobic003G121600 Sobic003G121600 Sobic004G282100--Sobic003G121600 Sobic007G117800 Sobic007G117800 Sobic004G282100--Sobic007G117800 Sobic004G282100--Sobic004G154300 Sobic003G148900 Sobic003G148900 Sobic004G282100--Sobic003G148900 Sobic008G162000 Sobic008G162000 Sobic004G282100--Sobic008G162000 Sobic001G458200 Sobic001G458200 Sobic004G282100--Sobic001G458200 Sobic006G095200 Sobic006G095200 Sobic004G282100--Sobic006G095200 Sobic004G282100--Sobic003G150900 Sobic006G061100 Sobic006G061100 Sobic004G154300--Sobic006G061100 Sobic004G154300--Sobic004G282100 Sobic004G154300--Sobic003G150900 Sobic006G141600 Sobic006G141600 Sobic004G154300--Sobic006G141600 Sobic001G168900 Sobic001G168900 Sobic004G154300--Sobic001G168900 Sobic002G292900 Sobic002G292900 Sobic004G154300--Sobic002G292900 Sobic004G154300--Sobic001G458200 Sobic002G029100 Sobic002G029100 Sobic004G154300--Sobic002G029100 Sobic006G245100 Sobic006G245100 Sobic004G154300--Sobic006G245100 Sobic005G114800 Sobic005G114800 Sobic003G150900--Sobic005G114800 Sobic009G166600 Sobic009G166600 Sobic003G150900--Sobic009G166600 Sobic001G005600 Sobic001G005600 Sobic003G150900--Sobic001G005600 Sobic003G150900--Sobic006G139100 Sobic001G042200 Sobic001G042200 Sobic003G150900--Sobic001G042200 Sobic007G146600 Sobic007G146600 Sobic003G150900--Sobic007G146600 Sobic008G021000 Sobic008G021000 Sobic003G150900--Sobic008G021000 Sobic010G077500 Sobic010G077500 Sobic003G150900--Sobic010G077500 Sobic009G160600 Sobic009G160600 Sobic003G150900--Sobic009G160600 Sobic001G008500 Sobic001G008500 Sobic003G008600--Sobic001G008500 Sobic001G115500 Sobic001G115500 Sobic003G008600--Sobic001G115500 Sobic002G423500 Sobic002G423500 Sobic003G008600--Sobic002G423500 Sobic002G365900 Sobic002G365900 Sobic003G008600--Sobic002G365900 Sobic002G208400 Sobic002G208400 Sobic003G008600--Sobic002G208400 Sobic004G215700 Sobic004G215700 Sobic003G008600--Sobic004G215700 Sobic001G460500 Sobic001G460500 Sobic003G008600--Sobic001G460500 Sobic004G075200 Sobic004G075200 Sobic003G008600--Sobic004G075200 Sobic003G130000 Sobic003G130000 Sobic003G008600--Sobic003G130000 Sobic002G160700 Sobic002G160700 Sobic002G199400--Sobic002G160700 Sobic001G151600 Sobic001G151600 Sobic002G199400--Sobic001G151600 Sobic001G469200 Sobic001G469200 Sobic002G199400--Sobic001G469200 Sobic001G358500 Sobic001G358500 Sobic002G199400--Sobic001G358500 Sobic006G259900 Sobic006G259900 Sobic002G199400--Sobic006G259900 Sobic002G199400--Sobic006G282200 Sobic005G175000 Sobic005G175000 Sobic002G199400--Sobic005G175000 Sobic004G030400 Sobic004G030400 Sobic002G199400--Sobic004G030400 Sobic005G144201 Sobic005G144201 Sobic002G199400--Sobic005G144201 Sobic005G031000 Sobic005G031000 Sobic002G125800--Sobic005G031000 Sobic006G237000 Sobic006G237000 Sobic002G125800--Sobic006G237000 Sobic001G533100 Sobic001G533100 Sobic002G125800--Sobic001G533100 Sobic001G200200 Sobic001G200200 Sobic002G125800--Sobic001G200200 Sobic001G004200 Sobic001G004200 Sobic002G125800--Sobic001G004200 Sobic004G356200 Sobic004G356200 Sobic002G125800--Sobic004G356200 Sobic002G125800--Sobic010G192600 Sobic003G166500 Sobic003G166500 Sobic002G125800--Sobic003G166500 Sobic002G125800--Sobic004G030400 Sobic001G455000 Sobic001G455000 Sobic008G019532--Sobic001G455000 Sobic002G322400 Sobic002G322400 Sobic008G019532--Sobic002G322400 Sobic008G019532--Sobic010G192600 Sobic010G171000 Sobic010G171000 Sobic008G019532--Sobic010G171000 Sobic001G114200 Sobic001G114200 Sobic008G019532--Sobic001G114200 Sobic001G097900 Sobic001G097900 Sobic008G019532--Sobic001G097900 Sobic002G076500 Sobic002G076500 Sobic008G019532--Sobic002G076500 Sobic001G356100 Sobic001G356100 Sobic008G019532--Sobic001G356100 Sobic008G019532--Sobic005G114800
Octagon: transcription factors


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