Gene annotation
Transcriptome id Sobic.004G117200.2
Synonym Sb04g009760, PDV1
Functional annotation expressed protein
UniProt A0A1Z5RLZ7
Pfam -
Panther DB PTHR33600 PTHR33600:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G53280 : plastid division1
RAP-DB (Rice) LOC_Os02g16450.1 : expressed protein
MaizeGDB (Corn) Zm00025a019881 , Zm00025a034391
Brachypodium KQJ94309 , KQJ94310 , PNT66301 , PNT66302
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G282800 AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
2 Sobic.001G116500 phosphoglucomutase, putative, expressed K01835: phosphoglucomutase
3 Sobic.003G150500 uncharacterized aarF domain-containing protein kinase 4, putative, expressed K08869: ADCK, aarF domain-containing kinase
4 Sobic.002G004600 Ser/Thr protein phosphatase family protein, putative, expressed -
5 Sobic.002G047500 galactose-1-phosphate uridyl transferase, putative, expressed K00965: galT, UDPglucose--hexose-1-phosphate uridylyltransferase
6 Sobic.010G134000 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
7 Sobic.001G261545 - K01669: deoxyribodipyrimidine photo-lyase
8 Sobic.004G021000 cyclin-dependent kinase A-2, putative, expressed K02206: cyclin-dependent kinase 2
9 Sobic.002G407000 4-alpha-glucanotransferase, putative, expressed K00705: 4-alpha-glucanotransferase
10 Sobic.003G048500 acyl-protein thioesterase, putative, expressed K06130: lysophospholipase II
11 Sobic.003G370500 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
12 Sobic.002G252300 expressed protein -
13 Sobic.004G097200 Mpv17 / PMP22 family domain containing protein, expressed K13347: PXMP2, peroxisomal membrane protein 2
14 Sobic.001G076400 H-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
15 Sobic.001G072300 expressed protein -
16 Sobic.010G007300 hydrolase activity(PubMedID : 24655390)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase activity(PubMedID : 24655390)@haloacid dehalogenase-like hydrolase family protein, putative, expressed -
17 Sobic.008G163300 AGC_AGC_other_NDRh_TRCd.4 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
18 Sobic.003G391600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AMP-binding domain containing protein, expressed -
19 Sobic.004G303100 expressed protein -
20 Sobic.003G298200 dehydrogenase, putative, expressed -


Gene co-expression network
sample Sobic004G117200 Sobic004G117200 Sobic001G282800 Sobic001G282800 Sobic004G117200--Sobic001G282800 Sobic001G116500 Sobic001G116500 Sobic004G117200--Sobic001G116500 Sobic003G150500 Sobic003G150500 Sobic004G117200--Sobic003G150500 Sobic002G004600 Sobic002G004600 Sobic004G117200--Sobic002G004600 Sobic002G047500 Sobic002G047500 Sobic004G117200--Sobic002G047500 Sobic010G134000 Sobic010G134000 Sobic004G117200--Sobic010G134000 Sobic001G261545 Sobic001G261545 Sobic004G117200--Sobic001G261545 Sobic004G021000 Sobic004G021000 Sobic004G117200--Sobic004G021000 Sobic002G407000 Sobic002G407000 Sobic004G117200--Sobic002G407000 Sobic001G282800--Sobic003G150500 Sobic001G411200 Sobic001G411200 Sobic001G282800--Sobic001G411200 Sobic004G154700 Sobic004G154700 Sobic001G282800--Sobic004G154700 Sobic001G282800--Sobic002G004600 Sobic009G231800 Sobic009G231800 Sobic001G282800--Sobic009G231800 Sobic002G043800 Sobic002G043800 Sobic001G282800--Sobic002G043800 Sobic004G151800 Sobic004G151800 Sobic001G282800--Sobic004G151800 Sobic004G143300 Sobic004G143300 Sobic001G282800--Sobic004G143300 Sobic001G282800--Sobic002G407000 Sobic004G094700 Sobic004G094700 Sobic001G116500--Sobic004G094700 Sobic001G537100 Sobic001G537100 Sobic001G116500--Sobic001G537100 Sobic005G111700 Sobic005G111700 Sobic001G116500--Sobic005G111700 Sobic006G039400 Sobic006G039400 Sobic001G116500--Sobic006G039400 Sobic001G178100 Sobic001G178100 Sobic001G116500--Sobic001G178100 Sobic003G279200 Sobic003G279200 Sobic001G116500--Sobic003G279200 Sobic004G018000 Sobic004G018000 Sobic001G116500--Sobic004G018000 Sobic001G435400 Sobic001G435400 Sobic001G116500--Sobic001G435400 Sobic001G462200 Sobic001G462200 Sobic001G116500--Sobic001G462200 Sobic003G150500--Sobic002G043800 Sobic003G298200 Sobic003G298200 Sobic003G150500--Sobic003G298200 Sobic003G107500 Sobic003G107500 Sobic003G150500--Sobic003G107500 Sobic010G150100 Sobic010G150100 Sobic003G150500--Sobic010G150100 Sobic003G150500--Sobic001G282800 Sobic003G150500--Sobic001G411200 Sobic005G176100 Sobic005G176100 Sobic003G150500--Sobic005G176100 Sobic004G151300 Sobic004G151300 Sobic003G150500--Sobic004G151300 Sobic004G086300 Sobic004G086300 Sobic003G150500--Sobic004G086300 Sobic002G004600--Sobic001G282800 Sobic003G310300 Sobic003G310300 Sobic002G004600--Sobic003G310300 Sobic002G004600--Sobic003G150500 Sobic002G004600--Sobic002G407000 Sobic002G004600--Sobic010G134000 Sobic002G004600--Sobic002G043800 Sobic002G004600--Sobic003G107500 Sobic002G004600--Sobic001G116500 Sobic009G200200 Sobic009G200200 Sobic002G004600--Sobic009G200200 Sobic007G028500 Sobic007G028500 Sobic002G047500--Sobic007G028500 Sobic008G087900 Sobic008G087900 Sobic002G047500--Sobic008G087900 Sobic001G014200 Sobic001G014200 Sobic002G047500--Sobic001G014200 Sobic003G370500 Sobic003G370500 Sobic002G047500--Sobic003G370500 Sobic002G047500--Sobic006G039400 Sobic008G048300 Sobic008G048300 Sobic002G047500--Sobic008G048300 Sobic007G076400 Sobic007G076400 Sobic002G047500--Sobic007G076400 Sobic007G087000 Sobic007G087000 Sobic002G047500--Sobic007G087000 Sobic004G054100 Sobic004G054100 Sobic002G047500--Sobic004G054100 Sobic003G010800 Sobic003G010800 Sobic010G134000--Sobic003G010800 Sobic003G433400 Sobic003G433400 Sobic010G134000--Sobic003G433400 Sobic003G403300 Sobic003G403300 Sobic010G134000--Sobic003G403300 Sobic002G310900 Sobic002G310900 Sobic010G134000--Sobic002G310900 Sobic010G134000--Sobic002G407000 Sobic010G134000--Sobic001G411200 Sobic003G291800 Sobic003G291800 Sobic010G134000--Sobic003G291800 Sobic010G134000--Sobic001G178100 Sobic006G270000 Sobic006G270000 Sobic010G134000--Sobic006G270000 Sobic007G136200 Sobic007G136200 Sobic001G261545--Sobic007G136200 Sobic010G171600 Sobic010G171600 Sobic001G261545--Sobic010G171600 Sobic005G100600 Sobic005G100600 Sobic001G261545--Sobic005G100600 Sobic009G103000 Sobic009G103000 Sobic001G261545--Sobic009G103000 Sobic003G264800 Sobic003G264800 Sobic001G261545--Sobic003G264800 Sobic007G058001 Sobic007G058001 Sobic001G261545--Sobic007G058001 Sobic001G085600 Sobic001G085600 Sobic001G261545--Sobic001G085600 Sobic006G232600 Sobic006G232600 Sobic001G261545--Sobic006G232600 Sobic001G436400 Sobic001G436400 Sobic001G261545--Sobic001G436400 Sobic001G485300 Sobic001G485300 Sobic004G021000--Sobic001G485300 Sobic002G276800 Sobic002G276800 Sobic004G021000--Sobic002G276800 Sobic004G017900 Sobic004G017900 Sobic004G021000--Sobic004G017900 Sobic003G085500 Sobic003G085500 Sobic004G021000--Sobic003G085500 Sobic004G054700 Sobic004G054700 Sobic004G021000--Sobic004G054700 Sobic003G260600 Sobic003G260600 Sobic004G021000--Sobic003G260600 Sobic003G235100 Sobic003G235100 Sobic004G021000--Sobic003G235100 Sobic006G119900 Sobic006G119900 Sobic004G021000--Sobic006G119900 Sobic007G118500 Sobic007G118500 Sobic004G021000--Sobic007G118500 Sobic001G201900 Sobic001G201900 Sobic002G407000--Sobic001G201900 Sobic007G113600 Sobic007G113600 Sobic002G407000--Sobic007G113600 Sobic002G407000--Sobic001G178100 Sobic002G407000--Sobic001G411200 Sobic002G407000--Sobic003G403300 Sobic002G098900 Sobic002G098900 Sobic002G407000--Sobic002G098900 Sobic002G407000--Sobic010G134000 Sobic001G067700 Sobic001G067700 Sobic002G407000--Sobic001G067700 Sobic002G407000--Sobic003G010800
Octagon: transcription factors


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