Gene annotation
| Transcriptome id | Sobic.004G133500.1 |
|---|---|
| Synonym | SbSWEET4-1;Sugars Will Eventually Be Exported Transporters, Sb04g012910, SbSWEET4-1 |
| Functional annotation | Sugar transporter (PubMedID : 27330561) Sugar transporter (PubMedID : 27330561) nodulin MtN3 family protein, putative, expressed |
| UniProt | C5Y0L1 |
| Pfam | PF03083 |
| Panther DB | PTHR10791 PTHR10791:SF41 |
| NCBI CDD | KOG1623; Multitransmembrane protein |
| KEGG Orthology | K15382; SLC50A, solute carrier family 50 (sugar transporter) |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT4G10850 : Nodulin MtN3 family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os02g19820.1 : nodulin MtN3 family protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a038465 , Zm00025a019713 , Zm00025a028643 , Zm00025a019719 , Zm00025a019717 |
| Brachypodium | KQJ94393 , KQK17179 |
| Barley | HORVU6Hr1G055960.1 , HORVU6Hr1G055960.3 , HORVU6Hr1G055960.2 , HORVU6Hr1G055960.5 , HORVU6Hr1G055960.4 , HORVU6Hr1G055960.7 , HORVU6Hr1G055960.6 |
| Wheat | TraesCS6D02G201900 , TraesCS6B02G248300 , TraesCS6A02G218800 |
| Populus | - |
JBrowse
| Sobic.004G133500 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G064900 | gp176, putative, expressed | - |
| 2 | Sobic.004G247200 | erwinia induced protein 2, putative, expressed | - |
| 3 | Sobic.008G034300 | expressed protein | - |
| 4 | Sobic.001G371900 | copper/zinc superoxide dismutase(PubMedID : 23915383)@copper/zinc superoxide dismutase, putative, expressed | K04565: superoxide dismutase, Cu-Zn family |
| 5 | Sobic.007G195800 | uncharacterized protein family UPF0016 domain containing protein, expressed | - |
| 6 | Sobic.002G421800 | Up-reguralion under drought(PubMedID : 24916767)@homeobox domain containing protein, expressed | - |
| 7 | Sobic.003G072300 | triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed | K01803: TPI, triosephosphate isomerase (TIM) |
| 8 | Sobic.004G117600 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@WRKY39, expressed | - |
| 9 | Sobic.002G199650 | - | - |
| 10 | Sobic.009G183300 | glycerol-3-phosphate dehydrogenase, putative, expressed | K00006: glycerol-3-phosphate dehydrogenase (NAD+) |
| 11 | Sobic.001G066700 | GLTP domain containing protein, putative, expressed | - |
| 12 | Sobic.009G191600 | tesmin/TSO1-like CXC domain containing protein, expressed | - |
| 13 | Sobic.002G239200 | zinc finger, C3HC4 type domain containing protein, expressed | K16285: RING/U-box domain-containing protein |
| 14 | Sobic.006G239300 | thiamine-repressible mitochondrial transport protein THI74, putative, expressed | K15289: solute carrier family 35, member F5 |
| 15 | Sobic.004G301300 | zinc finger, C3HC4 type domain containing protein, expressed | - |
| 16 | Sobic.003G289601 | - | - |
| 17 | Sobic.003G063200 | uncharacterized Cys-rich domain containing protein, putative, expressed | - |
| 18 | Sobic.001G070800 | expressed protein | - |
| 19 | Sobic.006G245500 | down-regulated TF in developmental senescence(PubMedID : 27586543)@AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed | K09285: OVM, AP2-like factor, ANT lineage |
| 20 | Sobic.009G204601 | - | K00850: pfkA, 6-phosphofructokinase 1 |
Gene co-expression network
Octagon: transcription factors
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