Gene annotation
Transcriptome id Sobic.004G311300.3,Sobic.004G311300.4,Sobic.004G311300.5
Synonym
Functional annotation expressed protein
UniProt A0A1Z5RQX6
Pfam PF04504
Panther DB PTHR31662 PTHR31662:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G01370 : DNA-binding storekeeper protein-related transcriptional regulator
RAP-DB (Rice) LOC_Os02g52950.1 : expressed protein
MaizeGDB (Corn) Zm00025a022243
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G536500 expressed protein -
2 Sobic.003G135700 - -
3 Sobic.004G352900 expressed protein -
4 Sobic.001G061101 - -
5 Sobic.010G194900 bZIP transcription factor domain containing protein, expressed -
6 Sobic.006G010600 peptidyl-prolyl cis-trans isomerase, putative, expressed K09578: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
7 Sobic.003G110200 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
8 Sobic.005G080200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed -
9 Sobic.003G268200 VIP1 protein, putative, expressed -
10 Sobic.004G325200 60S ribosome subunit biogenesis protein NIP7, putative, expressed K07565: 60S ribosome subunit biogenesis protein NIP7
11 Sobic.001G449700 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
12 Sobic.001G192600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
13 Sobic.001G019900 zinc finger, C3HC4 type domain containing protein, expressed K15707: RING finger protein 170
14 Sobic.003G244300 C2 domain containing protein, putative, expressed -
15 Sobic.002G092801 - -
16 Sobic.006G246100 one cut domain family member 3, putative, expressed -
17 Sobic.002G373001 - -
18 Sobic.010G171501 - -
19 Sobic.010G204600 SNF7 domain containing protein, putative, expressed K12197: CHMP1, VPS46, charged multivesicular body protein 1
20 Sobic.004G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed -


Gene co-expression network
sample Sobic004G311300 Sobic004G311300 Sobic001G536500 Sobic001G536500 Sobic004G311300--Sobic001G536500 Sobic003G135700 Sobic003G135700 Sobic004G311300--Sobic003G135700 Sobic004G352900 Sobic004G352900 Sobic004G311300--Sobic004G352900 Sobic001G061101 Sobic001G061101 Sobic004G311300--Sobic001G061101 Sobic010G194900 Sobic010G194900 Sobic004G311300--Sobic010G194900 Sobic006G010600 Sobic006G010600 Sobic004G311300--Sobic006G010600 Sobic003G110200 Sobic003G110200 Sobic004G311300--Sobic003G110200 Sobic005G080200 Sobic005G080200 Sobic004G311300--Sobic005G080200 Sobic003G268200 Sobic003G268200 Sobic004G311300--Sobic003G268200 Sobic010G204600 Sobic010G204600 Sobic001G536500--Sobic010G204600 Sobic003G063200 Sobic003G063200 Sobic001G536500--Sobic003G063200 Sobic004G186500 Sobic004G186500 Sobic001G536500--Sobic004G186500 Sobic001G445800 Sobic001G445800 Sobic001G536500--Sobic001G445800 Sobic001G019900 Sobic001G019900 Sobic001G536500--Sobic001G019900 Sobic009G131100 Sobic009G131100 Sobic001G536500--Sobic009G131100 Sobic001G390300 Sobic001G390300 Sobic001G536500--Sobic001G390300 Sobic001G037000 Sobic001G037000 Sobic001G536500--Sobic001G037000 Sobic010G054200 Sobic010G054200 Sobic001G536500--Sobic010G054200 Sobic010G268400 Sobic010G268400 Sobic003G135700--Sobic010G268400 Sobic003G192100 Sobic003G192100 Sobic003G135700--Sobic003G192100 Sobic007G025500 Sobic007G025500 Sobic003G135700--Sobic007G025500 Sobic010G136000 Sobic010G136000 Sobic003G135700--Sobic010G136000 Sobic002G082600 Sobic002G082600 Sobic003G135700--Sobic002G082600 Sobic001G107400 Sobic001G107400 Sobic003G135700--Sobic001G107400 Sobic002G373001 Sobic002G373001 Sobic003G135700--Sobic002G373001 Sobic008G032100 Sobic008G032100 Sobic003G135700--Sobic008G032100 Sobic002G312400 Sobic002G312400 Sobic003G135700--Sobic002G312400 Sobic002G427900 Sobic002G427900 Sobic004G352900--Sobic002G427900 Sobic009G156300 Sobic009G156300 Sobic004G352900--Sobic009G156300 Sobic004G014000 Sobic004G014000 Sobic004G352900--Sobic004G014000 Sobic010G066300 Sobic010G066300 Sobic004G352900--Sobic010G066300 Sobic002G254650 Sobic002G254650 Sobic004G352900--Sobic002G254650 Sobic004G352900--Sobic001G536500 Sobic002G117200 Sobic002G117200 Sobic004G352900--Sobic002G117200 Sobic010G029400 Sobic010G029400 Sobic004G352900--Sobic010G029400 Sobic004G352900--Sobic009G131100 Sobic001G061101--Sobic004G311300 Sobic006G246100 Sobic006G246100 Sobic001G061101--Sobic006G246100 Sobic009G065300 Sobic009G065300 Sobic001G061101--Sobic009G065300 Sobic009G121900 Sobic009G121900 Sobic001G061101--Sobic009G121900 Sobic001G061101--Sobic005G080200 Sobic001G117500 Sobic001G117500 Sobic001G061101--Sobic001G117500 Sobic001G432700 Sobic001G432700 Sobic001G061101--Sobic001G432700 Sobic004G010300 Sobic004G010300 Sobic001G061101--Sobic004G010300 Sobic001G061101--Sobic001G536500 Sobic010G194900--Sobic009G131100 Sobic005G228000 Sobic005G228000 Sobic010G194900--Sobic005G228000 Sobic010G194900--Sobic003G135700 Sobic009G094450 Sobic009G094450 Sobic010G194900--Sobic009G094450 Sobic010G194900--Sobic006G246100 Sobic010G194900--Sobic001G536500 Sobic010G194900--Sobic004G010300 Sobic010G194900--Sobic004G014000 Sobic010G194900--Sobic004G352900 Sobic004G103700 Sobic004G103700 Sobic006G010600--Sobic004G103700 Sobic006G010600--Sobic001G445800 Sobic004G145801 Sobic004G145801 Sobic006G010600--Sobic004G145801 Sobic001G172000 Sobic001G172000 Sobic006G010600--Sobic001G172000 Sobic006G010600--Sobic010G204600 Sobic003G368500 Sobic003G368500 Sobic006G010600--Sobic003G368500 Sobic003G181500 Sobic003G181500 Sobic006G010600--Sobic003G181500 Sobic002G078400 Sobic002G078400 Sobic006G010600--Sobic002G078400 Sobic004G310300 Sobic004G310300 Sobic006G010600--Sobic004G310300 Sobic001G449700 Sobic001G449700 Sobic003G110200--Sobic001G449700 Sobic003G202200 Sobic003G202200 Sobic003G110200--Sobic003G202200 Sobic007G149300 Sobic007G149300 Sobic003G110200--Sobic007G149300 Sobic002G092801 Sobic002G092801 Sobic003G110200--Sobic002G092801 Sobic003G102200 Sobic003G102200 Sobic003G110200--Sobic003G102200 Sobic001G383700 Sobic001G383700 Sobic003G110200--Sobic001G383700 Sobic001G481100 Sobic001G481100 Sobic003G110200--Sobic001G481100 Sobic003G021500 Sobic003G021500 Sobic003G110200--Sobic003G021500 Sobic005G186100 Sobic005G186100 Sobic003G110200--Sobic005G186100 Sobic005G080200--Sobic006G246100 Sobic005G080200--Sobic001G432700 Sobic001G192600 Sobic001G192600 Sobic005G080200--Sobic001G192600 Sobic001G195100 Sobic001G195100 Sobic005G080200--Sobic001G195100 Sobic010G194300 Sobic010G194300 Sobic005G080200--Sobic010G194300 Sobic003G037500 Sobic003G037500 Sobic005G080200--Sobic003G037500 Sobic003G417350 Sobic003G417350 Sobic005G080200--Sobic003G417350 Sobic010G075600 Sobic010G075600 Sobic005G080200--Sobic010G075600 Sobic001G319200 Sobic001G319200 Sobic005G080200--Sobic001G319200 Sobic003G268200--Sobic002G082600 Sobic004G325200 Sobic004G325200 Sobic003G268200--Sobic004G325200 Sobic003G268200--Sobic002G312400 Sobic003G268200--Sobic003G135700 Sobic004G332900 Sobic004G332900 Sobic003G268200--Sobic004G332900 Sobic003G268200--Sobic001G192600 Sobic001G234300 Sobic001G234300 Sobic003G268200--Sobic001G234300 Sobic009G183300 Sobic009G183300 Sobic003G268200--Sobic009G183300 Sobic004G065500 Sobic004G065500 Sobic003G268200--Sobic004G065500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.