Gene annotation
Transcriptome id Sobic.004G355300.6,Sobic.004G355300.5,Sobic.004G355300.4,Sobic.004G355300.1,Sobic.004G355300.2,Sobic.004G355300.3
Synonym AtPPT1, Sb04g038180, PPT1
Functional annotation para-hydroxybenzoate--polyprenyltransferase, mitochondrial precursor, putative, expressed
UniProt A0A1Z5RQI7 , A0A194YTA3
Pfam PF01040
Panther DB PTHR11048 PTHR11048:SF28
NCBI CDD KOG1381; Para-hydroxybenzoate-polyprenyl transferase
KEGG Orthology K06125; 4-hydroxybenzoate polyprenyltransferase
Gene Ontology GO:0016021; integral component of membrane GO:0004659prenyltransferase activity


Orthologs (automatic annotation)
TAIR AT4G23660 : polyprenyltransferase 1
RAP-DB (Rice) LOC_Os08g23320.1 : para-hydroxybenzoate--polyprenyltransferase, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a032719
Brachypodium PNT69723 , PNT69722 , KQK02108 , KQK02107 , PNT69719 , PNT69718 , PNT69720 , PNT69717 , PNT69724 , KQK02105 , KQK02106 , PNT69716 , KQK02104 , PNT69721
Barley HORVU0Hr1G018050.1 , HORVU0Hr1G017970.4 , HORVU0Hr1G017970.2 , HORVU0Hr1G017970.3 , HORVU0Hr1G017970.1 , HORVU6Hr1G094110.1 , HORVU5Hr1G117600.29 , HORVU5Hr1G117600.28 , HORVU5Hr1G117600.21 , HORVU5Hr1G117600.20 , HORVU5Hr1G117600.23 , HORVU5Hr1G117600.22 , HORVU5Hr1G117600.25 , HORVU5Hr1G117600.24 , HORVU5Hr1G117600.27 , HORVU5Hr1G117600.26 , HORVU6Hr1G094110.7 , HORVU6Hr1G094110.6 , HORVU6Hr1G094110.5 , HORVU6Hr1G094110.4 , HORVU6Hr1G094110.3 , HORVU6Hr1G094110.2 , HORVU5Hr1G117600.8 , HORVU5Hr1G117600.9 , HORVU5Hr1G117600.6 , HORVU5Hr1G117600.7 , HORVU5Hr1G117600.4 , HORVU5Hr1G117600.5 , HORVU5Hr1G117600.2 , HORVU5Hr1G117600.3 , HORVU6Hr1G094110.9 , HORVU5Hr1G117600.1 , HORVU6Hr1G094110.8 , HORVU6Hr1G094110.10 , HORVU5Hr1G117600.18 , HORVU5Hr1G117600.14 , HORVU5Hr1G117600.15 , HORVU5Hr1G117600.16 , HORVU5Hr1G117600.17 , HORVU5Hr1G117600.10 , HORVU5Hr1G117600.11 , HORVU5Hr1G117600.12 , HORVU5Hr1G117600.13 , HORVU5Hr1G117600.36 , HORVU5Hr1G117600.37 , HORVU5Hr1G117600.34 , HORVU5Hr1G117600.35 , HORVU5Hr1G117600.19 , HORVU5Hr1G117600.30 , HORVU5Hr1G117600.31
Wheat TraesCS6D02G397900 , TraesCS5D02G514400 , TraesCS6B02G462500 , TraesCS6A02G413300
Populus -


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cDNA sequences
Sobic.004G355300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G064300 expressed protein -
2 Sobic.006G265300 endonuclease, putative, expressed -
3 Sobic.009G184800 ribosomal protein L11 methyltransferase-related, putative, expressed -
4 Sobic.010G125800 - -
5 Sobic.006G138600 DIE2/ALG10 family, putative, expressed K03850: alpha-1,2-glucosyltransferase
6 Sobic.006G243100 exonuclease, putative, expressed K14570: REX1, REXO1, RNA exonuclease 1
7 Sobic.007G118400 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
8 Sobic.010G279100 expressed protein -
9 Sobic.001G167800 single-stranded DNA-binding protein, putative, expressed -
10 Sobic.003G077600 WD domain, G-beta repeat domain containing protein, expressed K10140: DNA damage-binding protein 2
11 Sobic.004G157600 expressed protein -
12 Sobic.004G123600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed K18213: proteinaceous RNase P
13 Sobic.010G125700 HEAT repeat family protein, putative, expressed K06699: proteasome activator subunit 4
14 Sobic.009G141900 - -
15 Sobic.009G007800 TruB family pseudouridylate synthase, putative, expressed K03177: truB, PUS4, tRNA pseudouridine55 synthase
16 Sobic.002G045700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polynucleotide phosphorylase, putative, expressed K00962: pnp, polyribonucleotide nucleotidyltransferase
17 Sobic.007G090448 - -
18 Sobic.001G098100 cyclin, putative, expressed K06634: cyclin H
19 Sobic.003G325200 disease resistance protein, putative, expressed -
20 Sobic.005G142900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic004G355300 Sobic004G355300 Sobic001G064300 Sobic001G064300 Sobic004G355300--Sobic001G064300 Sobic006G265300 Sobic006G265300 Sobic004G355300--Sobic006G265300 Sobic009G184800 Sobic009G184800 Sobic004G355300--Sobic009G184800 Sobic010G125800 Sobic010G125800 Sobic004G355300--Sobic010G125800 Sobic006G138600 Sobic006G138600 Sobic004G355300--Sobic006G138600 Sobic006G243100 Sobic006G243100 Sobic004G355300--Sobic006G243100 Sobic007G118400 Sobic007G118400 Sobic004G355300--Sobic007G118400 Sobic010G279100 Sobic010G279100 Sobic004G355300--Sobic010G279100 Sobic001G167800 Sobic001G167800 Sobic004G355300--Sobic001G167800 Sobic003G325200 Sobic003G325200 Sobic001G064300--Sobic003G325200 Sobic009G079500 Sobic009G079500 Sobic001G064300--Sobic009G079500 Sobic003G259901 Sobic003G259901 Sobic001G064300--Sobic003G259901 Sobic006G248700 Sobic006G248700 Sobic001G064300--Sobic006G248700 Sobic002G106100 Sobic002G106100 Sobic001G064300--Sobic002G106100 Sobic007G090448 Sobic007G090448 Sobic001G064300--Sobic007G090448 Sobic005G003900 Sobic005G003900 Sobic001G064300--Sobic005G003900 Sobic006G210100 Sobic006G210100 Sobic001G064300--Sobic006G210100 Sobic002G166500 Sobic002G166500 Sobic001G064300--Sobic002G166500 Sobic001G016100 Sobic001G016100 Sobic006G265300--Sobic001G016100 Sobic010G002000 Sobic010G002000 Sobic006G265300--Sobic010G002000 Sobic006G204600 Sobic006G204600 Sobic006G265300--Sobic006G204600 Sobic006G265300--Sobic010G279100 Sobic004G157600 Sobic004G157600 Sobic006G265300--Sobic004G157600 Sobic006G270200 Sobic006G270200 Sobic006G265300--Sobic006G270200 Sobic004G190900 Sobic004G190900 Sobic006G265300--Sobic004G190900 Sobic001G028100 Sobic001G028100 Sobic006G265300--Sobic001G028100 Sobic001G054100 Sobic001G054100 Sobic006G265300--Sobic001G054100 Sobic009G184800--Sobic006G265300 Sobic006G128300 Sobic006G128300 Sobic009G184800--Sobic006G128300 Sobic003G434800 Sobic003G434800 Sobic009G184800--Sobic003G434800 Sobic009G184800--Sobic004G157600 Sobic009G184800--Sobic006G138600 Sobic003G290800 Sobic003G290800 Sobic009G184800--Sobic003G290800 Sobic002G221600 Sobic002G221600 Sobic009G184800--Sobic002G221600 Sobic001G001300 Sobic001G001300 Sobic009G184800--Sobic001G001300 Sobic001G176700 Sobic001G176700 Sobic009G184800--Sobic001G176700 Sobic010G006300 Sobic010G006300 Sobic010G125800--Sobic010G006300 Sobic004G095800 Sobic004G095800 Sobic010G125800--Sobic004G095800 Sobic001G252401 Sobic001G252401 Sobic010G125800--Sobic001G252401 Sobic010G125800--Sobic001G176700 Sobic001G455500 Sobic001G455500 Sobic010G125800--Sobic001G455500 Sobic001G186200 Sobic001G186200 Sobic010G125800--Sobic001G186200 Sobic003G403800 Sobic003G403800 Sobic010G125800--Sobic003G403800 Sobic010G125800--Sobic004G355300 Sobic003G439000 Sobic003G439000 Sobic010G125800--Sobic003G439000 Sobic001G098100 Sobic001G098100 Sobic006G138600--Sobic001G098100 Sobic010G125700 Sobic010G125700 Sobic006G138600--Sobic010G125700 Sobic005G008500 Sobic005G008500 Sobic006G138600--Sobic005G008500 Sobic006G027200 Sobic006G027200 Sobic006G138600--Sobic006G027200 Sobic009G038600 Sobic009G038600 Sobic006G138600--Sobic009G038600 Sobic001G408500 Sobic001G408500 Sobic006G138600--Sobic001G408500 Sobic010G051200 Sobic010G051200 Sobic006G138600--Sobic010G051200 Sobic006G223200 Sobic006G223200 Sobic006G138600--Sobic006G223200 Sobic006G138600--Sobic007G118400 Sobic007G056200 Sobic007G056200 Sobic006G243100--Sobic007G056200 Sobic002G409700 Sobic002G409700 Sobic006G243100--Sobic002G409700 Sobic006G243100--Sobic003G434800 Sobic006G211100 Sobic006G211100 Sobic006G243100--Sobic006G211100 Sobic006G243100--Sobic004G355300 Sobic004G356000 Sobic004G356000 Sobic006G243100--Sobic004G356000 Sobic003G059400 Sobic003G059400 Sobic006G243100--Sobic003G059400 Sobic001G535100 Sobic001G535100 Sobic006G243100--Sobic001G535100 Sobic002G413600 Sobic002G413600 Sobic006G243100--Sobic002G413600 Sobic004G208301 Sobic004G208301 Sobic007G118400--Sobic004G208301 Sobic007G123700 Sobic007G123700 Sobic007G118400--Sobic007G123700 Sobic003G337200 Sobic003G337200 Sobic007G118400--Sobic003G337200 Sobic003G172450 Sobic003G172450 Sobic007G118400--Sobic003G172450 Sobic006G139200 Sobic006G139200 Sobic007G118400--Sobic006G139200 Sobic005G068300 Sobic005G068300 Sobic007G118400--Sobic005G068300 Sobic010G107901 Sobic010G107901 Sobic007G118400--Sobic010G107901 Sobic002G397700 Sobic002G397700 Sobic007G118400--Sobic002G397700 Sobic004G268600 Sobic004G268600 Sobic007G118400--Sobic004G268600 Sobic003G214800 Sobic003G214800 Sobic010G279100--Sobic003G214800 Sobic002G199000 Sobic002G199000 Sobic010G279100--Sobic002G199000 Sobic010G279100--Sobic001G455500 Sobic010G279100--Sobic006G204600 Sobic001G058600 Sobic001G058600 Sobic010G279100--Sobic001G058600 Sobic003G310800 Sobic003G310800 Sobic010G279100--Sobic003G310800 Sobic010G279100--Sobic003G439000 Sobic004G342500 Sobic004G342500 Sobic010G279100--Sobic004G342500 Sobic004G357300 Sobic004G357300 Sobic010G279100--Sobic004G357300 Sobic004G183300 Sobic004G183300 Sobic001G167800--Sobic004G183300 Sobic006G122500 Sobic006G122500 Sobic001G167800--Sobic006G122500 Sobic001G489900 Sobic001G489900 Sobic001G167800--Sobic001G489900 Sobic002G104400 Sobic002G104400 Sobic001G167800--Sobic002G104400 Sobic003G089600 Sobic003G089600 Sobic001G167800--Sobic003G089600 Sobic003G077600 Sobic003G077600 Sobic001G167800--Sobic003G077600 Sobic003G336200 Sobic003G336200 Sobic001G167800--Sobic003G336200 Sobic006G168500 Sobic006G168500 Sobic001G167800--Sobic006G168500 Sobic001G316100 Sobic001G316100 Sobic001G167800--Sobic001G316100
Octagon: transcription factors


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