Gene annotation
Transcriptome id Sobic.009G184800.1
Synonym Sb09g024440
Functional annotation ribosomal protein L11 methyltransferase-related, putative, expressed
UniProt C5Z0C7
Pfam PF13847
Panther DB PTHR18895 PTHR18895:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G53920 : ribosomal protein L11 methyltransferase-related
RAP-DB (Rice) LOC_Os05g41800.1 : ribosomal protein L11 methyltransferase-related, putative, expressed
MaizeGDB (Corn) Zm00025a037867
Brachypodium -
Barley HORVU1Hr1G067020.12 , HORVU1Hr1G067020.13 , HORVU1Hr1G067020.8 , HORVU1Hr1G067020.9 , HORVU1Hr1G067020.6 , HORVU1Hr1G067020.7 , HORVU1Hr1G067020.4 , HORVU1Hr1G067020.5 , HORVU1Hr1G067020.2 , HORVU1Hr1G067020.3 , HORVU1Hr1G067020.15 , HORVU1Hr1G067020.16 , HORVU1Hr1G067020.17 , HORVU1Hr1G067020.11 , HORVU1Hr1G067020.18 , HORVU1Hr1G067020.19 , HORVU1Hr1G067020.21 , HORVU1Hr1G067020.20 , HORVU1Hr1G067020.23 , HORVU1Hr1G067020.22 , HORVU1Hr1G067020.24 , HORVU1Hr1G067020.14
Wheat -
Populus -


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cDNA sequences
Sobic.009G184800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G265300 endonuclease, putative, expressed -
2 Sobic.006G128300 DUF565 domain containing protein, putative, expressed -
3 Sobic.003G434800 PPR repeat domain containing protein, putative, expressed -
4 Sobic.004G157600 expressed protein -
5 Sobic.006G138600 DIE2/ALG10 family, putative, expressed K03850: alpha-1,2-glucosyltransferase
6 Sobic.003G290800 starch binding domain containing protein, putative, expressed -
7 Sobic.002G221600 expressed protein -
8 Sobic.001G001300 rhodanese-like domain containing protein, putative, expressed -
9 Sobic.001G176700 CBS domain containing protein, expressed -
10 Sobic.002G413600 ulp1 protease family protein, putative, expressed K08592: sentrin-specific protease 1
11 Sobic.006G280800 expressed protein -
12 Sobic.001G098100 cyclin, putative, expressed K06634: cyclin H
13 Sobic.003G045300 cobalt ion transporter, putative, expressed -
14 Sobic.010G219900 expressed protein -
15 Sobic.003G161100 powdery mildew resistance protein PM3A, putative, expressed -
16 Sobic.009G038600 GA20663-PA, putative, expressed -
17 Sobic.001G186200 pentatricopeptide, putative, expressed -
18 Sobic.001G455500 pentatricopeptide repeat domain containing protein, putative, expressed -
19 Sobic.002G431300 uncharacterized ACR, YagE family COG1723 containing protein, expressed -
20 Sobic.008G153200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FAD dependent oxidoreductase, putative, expressed -


Gene co-expression network
sample Sobic009G184800 Sobic009G184800 Sobic006G265300 Sobic006G265300 Sobic009G184800--Sobic006G265300 Sobic006G128300 Sobic006G128300 Sobic009G184800--Sobic006G128300 Sobic003G434800 Sobic003G434800 Sobic009G184800--Sobic003G434800 Sobic004G157600 Sobic004G157600 Sobic009G184800--Sobic004G157600 Sobic006G138600 Sobic006G138600 Sobic009G184800--Sobic006G138600 Sobic003G290800 Sobic003G290800 Sobic009G184800--Sobic003G290800 Sobic002G221600 Sobic002G221600 Sobic009G184800--Sobic002G221600 Sobic001G001300 Sobic001G001300 Sobic009G184800--Sobic001G001300 Sobic001G176700 Sobic001G176700 Sobic009G184800--Sobic001G176700 Sobic001G016100 Sobic001G016100 Sobic006G265300--Sobic001G016100 Sobic010G002000 Sobic010G002000 Sobic006G265300--Sobic010G002000 Sobic006G204600 Sobic006G204600 Sobic006G265300--Sobic006G204600 Sobic010G279100 Sobic010G279100 Sobic006G265300--Sobic010G279100 Sobic006G265300--Sobic004G157600 Sobic006G270200 Sobic006G270200 Sobic006G265300--Sobic006G270200 Sobic004G190900 Sobic004G190900 Sobic006G265300--Sobic004G190900 Sobic001G028100 Sobic001G028100 Sobic006G265300--Sobic001G028100 Sobic001G054100 Sobic001G054100 Sobic006G265300--Sobic001G054100 Sobic002G218500 Sobic002G218500 Sobic006G128300--Sobic002G218500 Sobic004G079800 Sobic004G079800 Sobic006G128300--Sobic004G079800 Sobic006G038500 Sobic006G038500 Sobic006G128300--Sobic006G038500 Sobic002G431300 Sobic002G431300 Sobic006G128300--Sobic002G431300 Sobic002G347600 Sobic002G347600 Sobic006G128300--Sobic002G347600 Sobic002G042500 Sobic002G042500 Sobic006G128300--Sobic002G042500 Sobic008G001900 Sobic008G001900 Sobic006G128300--Sobic008G001900 Sobic001G126300 Sobic001G126300 Sobic006G128300--Sobic001G126300 Sobic006G031800 Sobic006G031800 Sobic006G128300--Sobic006G031800 Sobic003G434800--Sobic003G290800 Sobic002G413600 Sobic002G413600 Sobic003G434800--Sobic002G413600 Sobic010G110400 Sobic010G110400 Sobic003G434800--Sobic010G110400 Sobic002G118200 Sobic002G118200 Sobic003G434800--Sobic002G118200 Sobic003G203300 Sobic003G203300 Sobic003G434800--Sobic003G203300 Sobic007G192600 Sobic007G192600 Sobic003G434800--Sobic007G192600 Sobic005G118400 Sobic005G118400 Sobic003G434800--Sobic005G118400 Sobic001G219700 Sobic001G219700 Sobic003G434800--Sobic001G219700 Sobic003G379400 Sobic003G379400 Sobic003G434800--Sobic003G379400 Sobic004G225600 Sobic004G225600 Sobic004G157600--Sobic004G225600 Sobic002G296100 Sobic002G296100 Sobic004G157600--Sobic002G296100 Sobic004G157600--Sobic004G190900 Sobic003G434700 Sobic003G434700 Sobic004G157600--Sobic003G434700 Sobic004G157600--Sobic002G042500 Sobic003G045300 Sobic003G045300 Sobic004G157600--Sobic003G045300 Sobic009G170000 Sobic009G170000 Sobic004G157600--Sobic009G170000 Sobic001G261573 Sobic001G261573 Sobic004G157600--Sobic001G261573 Sobic009G129100 Sobic009G129100 Sobic004G157600--Sobic009G129100 Sobic001G098100 Sobic001G098100 Sobic006G138600--Sobic001G098100 Sobic010G125700 Sobic010G125700 Sobic006G138600--Sobic010G125700 Sobic005G008500 Sobic005G008500 Sobic006G138600--Sobic005G008500 Sobic006G027200 Sobic006G027200 Sobic006G138600--Sobic006G027200 Sobic009G038600 Sobic009G038600 Sobic006G138600--Sobic009G038600 Sobic001G408500 Sobic001G408500 Sobic006G138600--Sobic001G408500 Sobic010G051200 Sobic010G051200 Sobic006G138600--Sobic010G051200 Sobic006G223200 Sobic006G223200 Sobic006G138600--Sobic006G223200 Sobic007G118400 Sobic007G118400 Sobic006G138600--Sobic007G118400 Sobic007G185700 Sobic007G185700 Sobic003G290800--Sobic007G185700 Sobic003G290800--Sobic002G118200 Sobic003G290800--Sobic001G261573 Sobic003G290800--Sobic005G118400 Sobic001G530900 Sobic001G530900 Sobic003G290800--Sobic001G530900 Sobic010G153201 Sobic010G153201 Sobic003G290800--Sobic010G153201 Sobic002G231200 Sobic002G231200 Sobic003G290800--Sobic002G231200 Sobic003G290800--Sobic003G434800 Sobic003G146500 Sobic003G146500 Sobic003G290800--Sobic003G146500 Sobic007G015300 Sobic007G015300 Sobic002G221600--Sobic007G015300 Sobic002G221600--Sobic003G045300 Sobic009G251000 Sobic009G251000 Sobic002G221600--Sobic009G251000 Sobic001G448600 Sobic001G448600 Sobic002G221600--Sobic001G448600 Sobic001G099000 Sobic001G099000 Sobic002G221600--Sobic001G099000 Sobic005G184300 Sobic005G184300 Sobic002G221600--Sobic005G184300 Sobic006G237100 Sobic006G237100 Sobic002G221600--Sobic006G237100 Sobic002G181132 Sobic002G181132 Sobic002G221600--Sobic002G181132 Sobic004G255500 Sobic004G255500 Sobic002G221600--Sobic004G255500 Sobic006G280800 Sobic006G280800 Sobic001G001300--Sobic006G280800 Sobic003G085100 Sobic003G085100 Sobic001G001300--Sobic003G085100 Sobic003G160800 Sobic003G160800 Sobic001G001300--Sobic003G160800 Sobic002G133900 Sobic002G133900 Sobic001G001300--Sobic002G133900 Sobic009G148500 Sobic009G148500 Sobic001G001300--Sobic009G148500 Sobic005G111550 Sobic005G111550 Sobic001G001300--Sobic005G111550 Sobic003G287900 Sobic003G287900 Sobic001G001300--Sobic003G287900 Sobic001G500600 Sobic001G500600 Sobic001G001300--Sobic001G500600 Sobic001G134700 Sobic001G134700 Sobic001G001300--Sobic001G134700 Sobic010G162200 Sobic010G162200 Sobic001G176700--Sobic010G162200 Sobic003G285600 Sobic003G285600 Sobic001G176700--Sobic003G285600 Sobic007G028200 Sobic007G028200 Sobic001G176700--Sobic007G028200 Sobic010G162500 Sobic010G162500 Sobic001G176700--Sobic010G162500 Sobic004G197700 Sobic004G197700 Sobic001G176700--Sobic004G197700 Sobic010G006300 Sobic010G006300 Sobic001G176700--Sobic010G006300 Sobic009G133800 Sobic009G133800 Sobic001G176700--Sobic009G133800 Sobic003G097701 Sobic003G097701 Sobic001G176700--Sobic003G097701 Sobic004G208301 Sobic004G208301 Sobic001G176700--Sobic004G208301
Octagon: transcription factors


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