Gene annotation
Transcriptome id Sobic.002G221600.1
Synonym Sb02g026250
Functional annotation expressed protein
UniProt C5X271
Pfam -
Panther DB PTHR37247 PTHR37247:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G38490 : -
RAP-DB (Rice) LOC_Os09g27690.3 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G015300 calreticulin family protein, expressed -
2 Sobic.003G045300 cobalt ion transporter, putative, expressed -
3 Sobic.009G251000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SET domain containing protein, expressed -
4 Sobic.001G448600 GTP-binding protein, putative, expressed K03978: GTP-binding protein
5 Sobic.001G099000 expressed protein -
6 Sobic.005G184300 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase
7 Sobic.006G237100 amidase, putative, expressed K02433: gatA, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A
8 Sobic.002G181132 - -
9 Sobic.004G255500 SET domain-containing protein, putative, expressed -
10 Sobic.005G110481 - -
11 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
12 Sobic.002G158800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide repeat containing protein, putative, expressed -
13 Sobic.002G013700 PPR2, putative, expressed -
14 Sobic.001G025800 pentatricopeptide, putative, expressed -
15 Sobic.003G085000 sufB/sufD domain containing protein, putative, expressed K09015: Fe-S cluster assembly protein SufD
16 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -
17 Sobic.003G225100 uroporphyrinogen decarboxylase, putative, expressed K01599: hemE, uroporphyrinogen decarboxylase
18 Sobic.010G027200 OsClp9 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
19 Sobic.003G128400 OsClp1 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
20 Sobic.001G003900 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic002G221600 Sobic002G221600 Sobic007G015300 Sobic007G015300 Sobic002G221600--Sobic007G015300 Sobic003G045300 Sobic003G045300 Sobic002G221600--Sobic003G045300 Sobic009G251000 Sobic009G251000 Sobic002G221600--Sobic009G251000 Sobic001G448600 Sobic001G448600 Sobic002G221600--Sobic001G448600 Sobic001G099000 Sobic001G099000 Sobic002G221600--Sobic001G099000 Sobic005G184300 Sobic005G184300 Sobic002G221600--Sobic005G184300 Sobic006G237100 Sobic006G237100 Sobic002G221600--Sobic006G237100 Sobic002G181132 Sobic002G181132 Sobic002G221600--Sobic002G181132 Sobic004G255500 Sobic004G255500 Sobic002G221600--Sobic004G255500 Sobic007G015300--Sobic001G099000 Sobic002G158800 Sobic002G158800 Sobic007G015300--Sobic002G158800 Sobic004G338300 Sobic004G338300 Sobic007G015300--Sobic004G338300 Sobic010G027200 Sobic010G027200 Sobic007G015300--Sobic010G027200 Sobic002G140000 Sobic002G140000 Sobic007G015300--Sobic002G140000 Sobic007G015300--Sobic005G184300 Sobic001G375000 Sobic001G375000 Sobic007G015300--Sobic001G375000 Sobic007G116100 Sobic007G116100 Sobic007G015300--Sobic007G116100 Sobic003G128400 Sobic003G128400 Sobic007G015300--Sobic003G128400 Sobic003G045300--Sobic003G128400 Sobic003G045300--Sobic001G375000 Sobic001G003900 Sobic001G003900 Sobic003G045300--Sobic001G003900 Sobic003G045300--Sobic002G181132 Sobic009G092900 Sobic009G092900 Sobic003G045300--Sobic009G092900 Sobic004G003900 Sobic004G003900 Sobic003G045300--Sobic004G003900 Sobic003G045300--Sobic005G184300 Sobic003G162800 Sobic003G162800 Sobic003G045300--Sobic003G162800 Sobic008G090900 Sobic008G090900 Sobic003G045300--Sobic008G090900 Sobic009G104700 Sobic009G104700 Sobic009G251000--Sobic009G104700 Sobic009G251000--Sobic002G140000 Sobic005G110481 Sobic005G110481 Sobic009G251000--Sobic005G110481 Sobic010G011200 Sobic010G011200 Sobic009G251000--Sobic010G011200 Sobic009G251000--Sobic007G015300 Sobic009G251000--Sobic010G027200 Sobic009G251000--Sobic006G237100 Sobic007G090537 Sobic007G090537 Sobic009G251000--Sobic007G090537 Sobic002G045700 Sobic002G045700 Sobic009G251000--Sobic002G045700 Sobic001G448600--Sobic001G375000 Sobic001G448600--Sobic004G255500 Sobic001G448600--Sobic002G140000 Sobic001G281500 Sobic001G281500 Sobic001G448600--Sobic001G281500 Sobic002G013700 Sobic002G013700 Sobic001G448600--Sobic002G013700 Sobic001G448600--Sobic009G104700 Sobic001G448600--Sobic007G015300 Sobic001G448600--Sobic003G128400 Sobic001G448600--Sobic010G027200 Sobic001G099000--Sobic002G158800 Sobic001G099000--Sobic005G184300 Sobic001G099000--Sobic007G015300 Sobic002G081500 Sobic002G081500 Sobic001G099000--Sobic002G081500 Sobic001G099000--Sobic004G255500 Sobic001G099000--Sobic010G027200 Sobic002G109000 Sobic002G109000 Sobic001G099000--Sobic002G109000 Sobic003G373300 Sobic003G373300 Sobic001G099000--Sobic003G373300 Sobic006G166000 Sobic006G166000 Sobic001G099000--Sobic006G166000 Sobic005G184300--Sobic001G099000 Sobic007G101300 Sobic007G101300 Sobic005G184300--Sobic007G101300 Sobic005G184300--Sobic003G128400 Sobic005G184300--Sobic002G158800 Sobic005G184300--Sobic001G003900 Sobic002G297400 Sobic002G297400 Sobic005G184300--Sobic002G297400 Sobic005G184300--Sobic002G081500 Sobic006G055800 Sobic006G055800 Sobic005G184300--Sobic006G055800 Sobic005G184300--Sobic005G110481 Sobic006G237100--Sobic001G281500 Sobic006G237100--Sobic010G027200 Sobic006G237100--Sobic001G375000 Sobic002G404900 Sobic002G404900 Sobic006G237100--Sobic002G404900 Sobic006G237100--Sobic002G140000 Sobic001G161400 Sobic001G161400 Sobic006G237100--Sobic001G161400 Sobic001G437200 Sobic001G437200 Sobic006G237100--Sobic001G437200 Sobic006G237100--Sobic007G116100 Sobic003G310100 Sobic003G310100 Sobic006G237100--Sobic003G310100 Sobic006G166500 Sobic006G166500 Sobic002G181132--Sobic006G166500 Sobic002G181132--Sobic003G045300 Sobic002G181132--Sobic004G003900 Sobic002G181132--Sobic001G375000 Sobic002G181132--Sobic003G162800 Sobic002G181132--Sobic008G090900 Sobic002G181132--Sobic009G092900 Sobic003G345900 Sobic003G345900 Sobic002G181132--Sobic003G345900 Sobic002G156100 Sobic002G156100 Sobic002G181132--Sobic002G156100 Sobic004G255500--Sobic001G099000 Sobic004G255500--Sobic001G448600 Sobic005G022800 Sobic005G022800 Sobic004G255500--Sobic005G022800 Sobic004G255500--Sobic001G281500 Sobic004G255500--Sobic002G013700 Sobic004G255500--Sobic010G027200 Sobic004G255500--Sobic005G184300 Sobic004G255500--Sobic002G140000 Sobic004G255500--Sobic007G015300
Octagon: transcription factors


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