Gene annotation
Transcriptome id Sobic.004G358500.1
Synonym Sb04g038520
Functional annotation PRLI-interacting factor A, putative, expressed
UniProt C5XWT2
Pfam -
Panther DB PTHR34484 PTHR34484:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G19900 : PRLI-interacting factor, putative
RAP-DB (Rice) LOC_Os02g58570.1 : PRLI-interacting factor A, putative, expressed
MaizeGDB (Corn) Zm00025a032698
Brachypodium KQK02179
Barley HORVU5Hr1G087980.3 , HORVU5Hr1G087980.2 , HORVU5Hr1G087980.1 , HORVU5Hr1G087980.6 , HORVU5Hr1G087980.5 , HORVU5Hr1G087980.4 , HORVU6Hr1G095100.3 , HORVU6Hr1G095100.2 , HORVU6Hr1G095100.1 , HORVU6Hr1G095100.7 , HORVU6Hr1G095100.6 , HORVU6Hr1G095100.5 , HORVU6Hr1G095100.4
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G116200 PPR repeat domain containing protein, putative, expressed -
2 Sobic.002G290300 zinc finger Ran-binding domain-containing protein 2, putative, expressed -
3 Sobic.003G252000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide containing protein, putative, expressed -
4 Sobic.002G384150 - -
5 Sobic.001G453800 copper/zinc superoxide dismutase, putative, expressed K04565: superoxide dismutase, Cu-Zn family
6 Sobic.004G271200 OsWAK17 - OsWAK short gene, expressed K14649: transcription initiation factor TFIID subunit 8
7 Sobic.004G146150 - -
8 Sobic.001G362701 - -
9 Sobic.003G102300 helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.009G075201 - -
11 Sobic.008G137800 expressed protein -
12 Sobic.007G129900 expressed protein -
13 Sobic.007G145100 SGT1 protein, putative, expressed -
14 Sobic.010G042700 expressed protein -
15 Sobic.007G222900 RNA recognition motif family protein, expressed K14398: cleavage and polyadenylation specificity factor subunit 6/7
16 Sobic.003G320400 - -
17 Sobic.002G310000 PPR repeat containing protein, expressed -
18 Sobic.010G228700 ATCPSF30/CPSF30, putative, expressed K14404: CPSF4, cleavage and polyadenylation specificity factor subunit 4
19 Sobic.009G152400 glutamine cyclotransferase precursor, putative, expressed -
20 Sobic.001G409800 OsFBX234 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic004G358500 Sobic004G358500 Sobic001G116200 Sobic001G116200 Sobic004G358500--Sobic001G116200 Sobic002G290300 Sobic002G290300 Sobic004G358500--Sobic002G290300 Sobic003G252000 Sobic003G252000 Sobic004G358500--Sobic003G252000 Sobic002G384150 Sobic002G384150 Sobic004G358500--Sobic002G384150 Sobic001G453800 Sobic001G453800 Sobic004G358500--Sobic001G453800 Sobic004G271200 Sobic004G271200 Sobic004G358500--Sobic004G271200 Sobic004G146150 Sobic004G146150 Sobic004G358500--Sobic004G146150 Sobic001G362701 Sobic001G362701 Sobic004G358500--Sobic001G362701 Sobic003G102300 Sobic003G102300 Sobic004G358500--Sobic003G102300 Sobic004G193200 Sobic004G193200 Sobic001G116200--Sobic004G193200 Sobic007G088500 Sobic007G088500 Sobic001G116200--Sobic007G088500 Sobic002G128750 Sobic002G128750 Sobic001G116200--Sobic002G128750 Sobic003G073700 Sobic003G073700 Sobic001G116200--Sobic003G073700 Sobic001G248600 Sobic001G248600 Sobic001G116200--Sobic001G248600 Sobic001G535300 Sobic001G535300 Sobic001G116200--Sobic001G535300 Sobic006G045200 Sobic006G045200 Sobic001G116200--Sobic006G045200 Sobic002G335700 Sobic002G335700 Sobic001G116200--Sobic002G335700 Sobic001G116200--Sobic004G358500 Sobic007G222900 Sobic007G222900 Sobic002G290300--Sobic007G222900 Sobic002G040800 Sobic002G040800 Sobic002G290300--Sobic002G040800 Sobic010G171100 Sobic010G171100 Sobic002G290300--Sobic010G171100 Sobic001G107900 Sobic001G107900 Sobic002G290300--Sobic001G107900 Sobic010G228700 Sobic010G228700 Sobic002G290300--Sobic010G228700 Sobic004G237100 Sobic004G237100 Sobic002G290300--Sobic004G237100 Sobic009G094800 Sobic009G094800 Sobic002G290300--Sobic009G094800 Sobic004G010101 Sobic004G010101 Sobic002G290300--Sobic004G010101 Sobic005G084400 Sobic005G084400 Sobic002G290300--Sobic005G084400 Sobic001G327400 Sobic001G327400 Sobic003G252000--Sobic001G327400 Sobic003G252000--Sobic004G271200 Sobic008G022701 Sobic008G022701 Sobic003G252000--Sobic008G022701 Sobic004G143100 Sobic004G143100 Sobic003G252000--Sobic004G143100 Sobic003G252000--Sobic002G384150 Sobic006G062200 Sobic006G062200 Sobic003G252000--Sobic006G062200 Sobic004G290400 Sobic004G290400 Sobic003G252000--Sobic004G290400 Sobic008G082800 Sobic008G082800 Sobic003G252000--Sobic008G082800 Sobic003G252000--Sobic004G358500 Sobic002G312100 Sobic002G312100 Sobic002G384150--Sobic002G312100 Sobic003G326100 Sobic003G326100 Sobic002G384150--Sobic003G326100 Sobic002G223100 Sobic002G223100 Sobic002G384150--Sobic002G223100 Sobic002G012350 Sobic002G012350 Sobic002G384150--Sobic002G012350 Sobic002G267300 Sobic002G267300 Sobic002G384150--Sobic002G267300 Sobic007G129900 Sobic007G129900 Sobic002G384150--Sobic007G129900 Sobic002G384150--Sobic004G290400 Sobic007G069450 Sobic007G069450 Sobic002G384150--Sobic007G069450 Sobic002G401301 Sobic002G401301 Sobic002G384150--Sobic002G401301 Sobic001G524300 Sobic001G524300 Sobic001G453800--Sobic001G524300 Sobic001G346600 Sobic001G346600 Sobic001G453800--Sobic001G346600 Sobic001G465300 Sobic001G465300 Sobic001G453800--Sobic001G465300 Sobic001G370500 Sobic001G370500 Sobic001G453800--Sobic001G370500 Sobic010G047000 Sobic010G047000 Sobic001G453800--Sobic010G047000 Sobic002G279800 Sobic002G279800 Sobic001G453800--Sobic002G279800 Sobic002G088100 Sobic002G088100 Sobic001G453800--Sobic002G088100 Sobic001G503900 Sobic001G503900 Sobic001G453800--Sobic001G503900 Sobic004G064300 Sobic004G064300 Sobic001G453800--Sobic004G064300 Sobic003G332900 Sobic003G332900 Sobic004G271200--Sobic003G332900 Sobic004G271200--Sobic006G062200 Sobic004G271200--Sobic003G252000 Sobic002G146400 Sobic002G146400 Sobic004G271200--Sobic002G146400 Sobic008G165900 Sobic008G165900 Sobic004G271200--Sobic008G165900 Sobic010G211500 Sobic010G211500 Sobic004G271200--Sobic010G211500 Sobic004G271200--Sobic006G045200 Sobic003G324100 Sobic003G324100 Sobic004G271200--Sobic003G324100 Sobic005G012700 Sobic005G012700 Sobic004G271200--Sobic005G012700 Sobic003G212800 Sobic003G212800 Sobic004G146150--Sobic003G212800 Sobic006G069400 Sobic006G069400 Sobic004G146150--Sobic006G069400 Sobic005G164966 Sobic005G164966 Sobic004G146150--Sobic005G164966 Sobic007G196201 Sobic007G196201 Sobic004G146150--Sobic007G196201 Sobic001G058000 Sobic001G058000 Sobic004G146150--Sobic001G058000 Sobic002G241700 Sobic002G241700 Sobic004G146150--Sobic002G241700 Sobic001G022000 Sobic001G022000 Sobic004G146150--Sobic001G022000 Sobic003G342800 Sobic003G342800 Sobic004G146150--Sobic003G342800 Sobic009G190900 Sobic009G190900 Sobic004G146150--Sobic009G190900 Sobic003G320400 Sobic003G320400 Sobic001G362701--Sobic003G320400 Sobic005G013800 Sobic005G013800 Sobic001G362701--Sobic005G013800 Sobic001G241500 Sobic001G241500 Sobic001G362701--Sobic001G241500 Sobic001G362701--Sobic002G223100 Sobic001G539760 Sobic001G539760 Sobic001G362701--Sobic001G539760 Sobic010G025100 Sobic010G025100 Sobic001G362701--Sobic010G025100 Sobic001G362701--Sobic002G267300 Sobic004G139400 Sobic004G139400 Sobic001G362701--Sobic004G139400 Sobic006G172400 Sobic006G172400 Sobic001G362701--Sobic006G172400 Sobic005G129100 Sobic005G129100 Sobic003G102300--Sobic005G129100 Sobic009G075201 Sobic009G075201 Sobic003G102300--Sobic009G075201 Sobic008G039300 Sobic008G039300 Sobic003G102300--Sobic008G039300 Sobic005G193600 Sobic005G193600 Sobic003G102300--Sobic005G193600 Sobic007G202700 Sobic007G202700 Sobic003G102300--Sobic007G202700 Sobic001G012000 Sobic001G012000 Sobic003G102300--Sobic001G012000 Sobic003G076800 Sobic003G076800 Sobic003G102300--Sobic003G076800 Sobic003G037100 Sobic003G037100 Sobic003G102300--Sobic003G037100 Sobic008G181801 Sobic008G181801 Sobic003G102300--Sobic008G181801
Octagon: transcription factors


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