Gene annotation
Transcriptome id Sobic.005G024800.1
Synonym ZIFL1, Sb05g002060
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
major facilitator superfamily antiporter, putative, expressed
UniProt A0A1B6PPU0
Pfam PF00083
Panther DB PTHR23504 PTHR23504:SF33
NCBI CDD KOG2615; Permease of the major facilitator superfamily
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G13750 : zinc induced facilitator-like 1
RAP-DB (Rice) LOC_Os12g03899.1 : major facilitator superfamily antiporter, putative, expressed
MaizeGDB (Corn) Zm00025a033398 , Zm00025a013127
Brachypodium KQJ89552 , KQK03822 , KQK03823
Barley HORVU4Hr1G026390.4 , HORVU4Hr1G026390.3 , HORVU4Hr1G026390.8 , HORVU4Hr1G026390.18 , HORVU4Hr1G026390.19 , HORVU4Hr1G026390.16 , HORVU4Hr1G026390.17 , HORVU4Hr1G026390.10 , HORVU4Hr1G026390.11 , HORVU4Hr1G026390.21 , HORVU4Hr1G026390.23 , HORVU4Hr1G026390.20 , HORVU4Hr1G026390.24 , HORVU4Hr1G026390.22 , HORVU3Hr1G115710.1 , HORVU3Hr1G115710.3 , HORVU3Hr1G115710.4 , HORVU3Hr1G115710.6 , HORVU3Hr1G115710.7 , HORVU3Hr1G115710.8 , HORVU3Hr1G115710.9 , HORVU3Hr1G115710.2 , HORVU3Hr1G115710.5 , HORVU4Hr1G026340.20 , HORVU4Hr1G026340.21 , HORVU4Hr1G026340.22 , HORVU4Hr1G026340.23 , HORVU4Hr1G026340.25 , HORVU4Hr1G026340.26 , HORVU4Hr1G026340.27 , HORVU4Hr1G026340.9 , HORVU4Hr1G026340.8 , HORVU4Hr1G026340.1 , HORVU4Hr1G026340.3 , HORVU4Hr1G026340.2 , HORVU4Hr1G026340.5 , HORVU4Hr1G026340.6 , HORVU4Hr1G026340.19 , HORVU4Hr1G026340.18 , HORVU4Hr1G026340.15 , HORVU4Hr1G026340.14 , HORVU4Hr1G026340.17 , HORVU4Hr1G026340.16 , HORVU4Hr1G026340.11 , HORVU4Hr1G026340.10 , HORVU4Hr1G026340.13 , HORVU4Hr1G026340.12
Wheat TraesCS4D02G125800 , TraesCS4B02G096700 , TraesCS3D02G188700 , TraesCS3D02G188100 , TraesCS3D02G188100 , TraesCS4A02G187700 , TraesCS4A02G187700 , TraesCS3A02G184700 , TraesCS4B02G131700 , TraesCS4B02G131700 , TraesCS4B02G131700 , TraesCS3B02G213700 , TraesCS4A02G218000 , TraesCS4A02G218000 , TraesCS4A02G218000 , TraesCS4A02G218000 , TraesCS4D02G125700 , TraesCS3B02G214500 , TraesCS3B02G214500 , TraesCS4B02G131500 , TraesCS4B02G131500 , TraesCS4B02G131500 , TraesCS3A02G183900 , TraesCS4A02G187600 , TraesCS4A02G187600 , TraesCS4A02G187600 , TraesCS4D02G093100
Populus -


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cDNA sequences
Sobic.005G024800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G217300 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12448: UXE, UDP-arabinose 4-epimerase
2 Sobic.003G377000 powdery mildew resistant protein 5, putative, expressed -
3 Sobic.007G026800 actin, putative, expressed K18584: ACTR3, actin-related protein 3
4 Sobic.005G177700 transmembrane protein 49, putative, expressed -
5 Sobic.009G072700 O-acyltransferase, putative, expressed K11155: diacylglycerol O-acyltransferase 1
6 Sobic.003G442601 - K03123: TFIIA2, GTF2A2, transcription initiation factor TFIIA small subunit
7 Sobic.007G124200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
8 Sobic.001G310100 WD domain, G-beta repeat domain containing protein, expressed K11804: DDB1- and CUL4-associated factor 8
9 Sobic.007G137600 NADP-dependent malate dehydrogenase(PubMedID : 26976818)@lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
10 Sobic.002G268800 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
11 Sobic.002G196200 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM motif family protein, expressed K13464: jasmonate ZIM domain-containing protein
12 Sobic.003G316200 transmembrane protein 49, putative, expressed -
13 Sobic.001G391200 ABC transporter, ATP-binding protein, putative, expressed K12608: CCR4-NOT complex subunit CAF16
14 Sobic.003G107500 expressed protein K10841: ERCC6, CSB, DNA excision repair protein ERCC-6
15 Sobic.009G069300 actin binding protein family(PubMedID : 26465154)@AR791, putative, expressed -
16 Sobic.002G383600 zinc finger, C3HC4 type domain containing protein, expressed K12169: KPC1, Kip1 ubiquitination-promoting complex protein 1
17 Sobic.001G188400 tobamovirus multiplication protein, putative, expressed -
18 Sobic.003G373500 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
19 Sobic.003G365100 hydrolase, alpha/beta fold family, putative, expressed -
20 Sobic.004G211866 - -


Gene co-expression network
sample Sobic005G024800 Sobic005G024800 Sobic006G217300 Sobic006G217300 Sobic005G024800--Sobic006G217300 Sobic003G377000 Sobic003G377000 Sobic005G024800--Sobic003G377000 Sobic007G026800 Sobic007G026800 Sobic005G024800--Sobic007G026800 Sobic005G177700 Sobic005G177700 Sobic005G024800--Sobic005G177700 Sobic009G072700 Sobic009G072700 Sobic005G024800--Sobic009G072700 Sobic003G442601 Sobic003G442601 Sobic005G024800--Sobic003G442601 Sobic007G124200 Sobic007G124200 Sobic005G024800--Sobic007G124200 Sobic001G310100 Sobic001G310100 Sobic005G024800--Sobic001G310100 Sobic007G137600 Sobic007G137600 Sobic005G024800--Sobic007G137600 Sobic001G122500 Sobic001G122500 Sobic006G217300--Sobic001G122500 Sobic006G207900 Sobic006G207900 Sobic006G217300--Sobic006G207900 Sobic006G217300--Sobic007G026800 Sobic003G043800 Sobic003G043800 Sobic006G217300--Sobic003G043800 Sobic010G064600 Sobic010G064600 Sobic006G217300--Sobic010G064600 Sobic001G312500 Sobic001G312500 Sobic006G217300--Sobic001G312500 Sobic002G431000 Sobic002G431000 Sobic006G217300--Sobic002G431000 Sobic010G184300 Sobic010G184300 Sobic006G217300--Sobic010G184300 Sobic004G228800 Sobic004G228800 Sobic006G217300--Sobic004G228800 Sobic002G265300 Sobic002G265300 Sobic003G377000--Sobic002G265300 Sobic003G377000--Sobic002G431000 Sobic002G139600 Sobic002G139600 Sobic003G377000--Sobic002G139600 Sobic003G377000--Sobic005G177700 Sobic003G377000--Sobic007G026800 Sobic003G377000--Sobic010G184300 Sobic004G093600 Sobic004G093600 Sobic003G377000--Sobic004G093600 Sobic004G096700 Sobic004G096700 Sobic003G377000--Sobic004G096700 SobicK043400 SobicK043400 Sobic003G377000--SobicK043400 Sobic007G026800--Sobic006G217300 Sobic007G026800--Sobic003G377000 Sobic007G026800--Sobic005G177700 Sobic007G026800--Sobic010G064600 Sobic007G056100 Sobic007G056100 Sobic007G026800--Sobic007G056100 Sobic007G026800--Sobic001G312500 Sobic007G026800--Sobic004G228800 Sobic007G026800--Sobic009G072700 Sobic007G026800--Sobic002G431000 Sobic003G316200 Sobic003G316200 Sobic005G177700--Sobic003G316200 Sobic005G177700--Sobic007G056100 Sobic002G355800 Sobic002G355800 Sobic005G177700--Sobic002G355800 Sobic006G077300 Sobic006G077300 Sobic005G177700--Sobic006G077300 Sobic009G041700 Sobic009G041700 Sobic005G177700--Sobic009G041700 Sobic001G253300 Sobic001G253300 Sobic005G177700--Sobic001G253300 Sobic005G177700--Sobic004G228800 Sobic003G365100 Sobic003G365100 Sobic005G177700--Sobic003G365100 Sobic002G268800 Sobic002G268800 Sobic005G177700--Sobic002G268800 Sobic009G072700--Sobic010G064600 Sobic006G260500 Sobic006G260500 Sobic009G072700--Sobic006G260500 Sobic009G072700--Sobic005G177700 Sobic008G093000 Sobic008G093000 Sobic009G072700--Sobic008G093000 Sobic007G075500 Sobic007G075500 Sobic009G072700--Sobic007G075500 Sobic001G301700 Sobic001G301700 Sobic009G072700--Sobic001G301700 Sobic010G261600 Sobic010G261600 Sobic009G072700--Sobic010G261600 Sobic003G365300 Sobic003G365300 Sobic009G072700--Sobic003G365300 Sobic009G072700--Sobic004G228800 Sobic009G080400 Sobic009G080400 Sobic003G442601--Sobic009G080400 Sobic010G272800 Sobic010G272800 Sobic003G442601--Sobic010G272800 Sobic010G020800 Sobic010G020800 Sobic003G442601--Sobic010G020800 Sobic006G104600 Sobic006G104600 Sobic003G442601--Sobic006G104600 Sobic005G149700 Sobic005G149700 Sobic003G442601--Sobic005G149700 Sobic003G227501 Sobic003G227501 Sobic003G442601--Sobic003G227501 Sobic007G210500 Sobic007G210500 Sobic003G442601--Sobic007G210500 Sobic001G282600 Sobic001G282600 Sobic003G442601--Sobic001G282600 Sobic003G348000 Sobic003G348000 Sobic003G442601--Sobic003G348000 Sobic001G103200 Sobic001G103200 Sobic007G124200--Sobic001G103200 Sobic001G516100 Sobic001G516100 Sobic007G124200--Sobic001G516100 Sobic008G059100 Sobic008G059100 Sobic007G124200--Sobic008G059100 Sobic010G026500 Sobic010G026500 Sobic007G124200--Sobic010G026500 Sobic001G350900 Sobic001G350900 Sobic007G124200--Sobic001G350900 Sobic008G047400 Sobic008G047400 Sobic007G124200--Sobic008G047400 Sobic003G367300 Sobic003G367300 Sobic007G124200--Sobic003G367300 Sobic003G036600 Sobic003G036600 Sobic007G124200--Sobic003G036600 Sobic001G409300 Sobic001G409300 Sobic007G124200--Sobic001G409300 Sobic003G107500 Sobic003G107500 Sobic001G310100--Sobic003G107500 Sobic010G014100 Sobic010G014100 Sobic001G310100--Sobic010G014100 Sobic010G226000 Sobic010G226000 Sobic001G310100--Sobic010G226000 Sobic002G196200 Sobic002G196200 Sobic001G310100--Sobic002G196200 Sobic007G099200 Sobic007G099200 Sobic001G310100--Sobic007G099200 Sobic003G298200 Sobic003G298200 Sobic001G310100--Sobic003G298200 Sobic002G043800 Sobic002G043800 Sobic001G310100--Sobic002G043800 Sobic003G119700 Sobic003G119700 Sobic001G310100--Sobic003G119700 Sobic003G150500 Sobic003G150500 Sobic001G310100--Sobic003G150500 Sobic004G057200 Sobic004G057200 Sobic007G137600--Sobic004G057200 Sobic006G175900 Sobic006G175900 Sobic007G137600--Sobic006G175900 Sobic003G373500 Sobic003G373500 Sobic007G137600--Sobic003G373500 Sobic002G358400 Sobic002G358400 Sobic007G137600--Sobic002G358400 Sobic001G357300 Sobic001G357300 Sobic007G137600--Sobic001G357300 Sobic010G027000 Sobic010G027000 Sobic007G137600--Sobic010G027000 Sobic006G178000 Sobic006G178000 Sobic007G137600--Sobic006G178000 Sobic004G121300 Sobic004G121300 Sobic007G137600--Sobic004G121300 Sobic001G082000 Sobic001G082000 Sobic007G137600--Sobic001G082000
Octagon: transcription factors


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