Gene annotation
Transcriptome id Sobic.005G061500.4,Sobic.005G061500.1
Synonym
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1B6PQG2 , A0A1B6PQG1
Pfam PF11961 PF05003 PF00069
Panther DB PTHR31730 PTHR27002 PTHR27002:SF111
NCBI CDD KOG1187; Serine/threonine protein kinase KOG0198MEKK and related serine/threonine protein kinases
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G34320 : Protein of unknown function (DUF668)
RAP-DB (Rice) LOC_Os11g11890.1,LOC_Os01g65330.1 : protein kinase domain containing protein, expressed,expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU5Hr1G077450.18 , HORVU5Hr1G077450.19 , HORVU5Hr1G077450.10 , HORVU5Hr1G077450.11 , HORVU5Hr1G077450.12 , HORVU5Hr1G077450.13 , HORVU5Hr1G077450.14 , HORVU5Hr1G077450.15 , HORVU5Hr1G077450.16 , HORVU5Hr1G077450.17 , HORVU5Hr1G077450.20 , HORVU5Hr1G077450.8 , HORVU5Hr1G077450.9 , HORVU5Hr1G077450.2 , HORVU5Hr1G077450.3 , HORVU5Hr1G077450.1 , HORVU5Hr1G077450.6 , HORVU5Hr1G077450.7 , HORVU5Hr1G077450.4 , HORVU5Hr1G077450.5
Wheat -
Populus -


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cDNA sequences
Sobic.005G061500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G301200 pattern formation protein EMB30, putative, expressed K18443: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
2 Sobic.001G015400 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
3 Sobic.004G337800 UDP-glucose glycoprotein glucosyltransferase 1 precursor, putative, expressed K11718: UDP-glucose:glycoprotein glucosyltransferase
4 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B
5 Sobic.006G021700 expressed protein K17600: vacuolar protein sorting-associated protein 54
6 Sobic.008G185800 translation initiation factor IF-3, putative, expressed K02520: infC, translation initiation factor IF-3
7 Sobic.006G093300 expressed protein K02519: infB, translation initiation factor IF-2
8 Sobic.006G260500 expressed protein -
9 Sobic.008G176000 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
10 Sobic.010G223300 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
11 Sobic.008G157200 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
12 Sobic.001G276200 ACI13, putative, expressed -
13 Sobic.006G207200 glycosyl hydrolase family 47 domain contain protein, expressed K01230: MAN1A_C, mannosyl-oligosaccharide alpha-1,2-mannosidase
14 Sobic.004G241900 OsDegp3 - Putative Deg protease homologue, expressed -
15 Sobic.003G405500 mannosyl-oligosaccharide glucosidase, putative, expressed K01228: mannosyl-oligosaccharide glucosidase
16 Sobic.009G256900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.001G449900 conserved oligomeric complex COG6 family protein, expressed -
18 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
19 Sobic.003G114400 expressed protein K05288: GPI ethanolamine phosphate transferase 3 subunit O
20 Sobic.007G005500 ECT protein, putative, expressed -


Gene co-expression network
sample Sobic005G061500 Sobic005G061500 Sobic001G301200 Sobic001G301200 Sobic005G061500--Sobic001G301200 Sobic001G015400 Sobic001G015400 Sobic005G061500--Sobic001G015400 Sobic004G337800 Sobic004G337800 Sobic005G061500--Sobic004G337800 Sobic001G333100 Sobic001G333100 Sobic005G061500--Sobic001G333100 Sobic006G021700 Sobic006G021700 Sobic005G061500--Sobic006G021700 Sobic008G185800 Sobic008G185800 Sobic005G061500--Sobic008G185800 Sobic006G093300 Sobic006G093300 Sobic005G061500--Sobic006G093300 Sobic006G260500 Sobic006G260500 Sobic005G061500--Sobic006G260500 Sobic008G176000 Sobic008G176000 Sobic005G061500--Sobic008G176000 Sobic001G301200--Sobic004G337800 Sobic001G449900 Sobic001G449900 Sobic001G301200--Sobic001G449900 Sobic001G301200--Sobic006G021700 Sobic003G029600 Sobic003G029600 Sobic001G301200--Sobic003G029600 Sobic008G124800 Sobic008G124800 Sobic001G301200--Sobic008G124800 Sobic001G404600 Sobic001G404600 Sobic001G301200--Sobic001G404600 Sobic002G340900 Sobic002G340900 Sobic001G301200--Sobic002G340900 Sobic002G308500 Sobic002G308500 Sobic001G301200--Sobic002G308500 Sobic003G171400 Sobic003G171400 Sobic001G301200--Sobic003G171400 Sobic001G099900 Sobic001G099900 Sobic001G015400--Sobic001G099900 Sobic004G208500 Sobic004G208500 Sobic001G015400--Sobic004G208500 Sobic007G005500 Sobic007G005500 Sobic001G015400--Sobic007G005500 Sobic001G015400--Sobic006G021700 Sobic003G143800 Sobic003G143800 Sobic001G015400--Sobic003G143800 Sobic001G015400--Sobic006G260500 Sobic003G182300 Sobic003G182300 Sobic001G015400--Sobic003G182300 Sobic002G398700 Sobic002G398700 Sobic001G015400--Sobic002G398700 Sobic006G106300 Sobic006G106300 Sobic001G015400--Sobic006G106300 Sobic004G337800--Sobic001G301200 Sobic010G059500 Sobic010G059500 Sobic004G337800--Sobic010G059500 Sobic009G084900 Sobic009G084900 Sobic004G337800--Sobic009G084900 Sobic003G405500 Sobic003G405500 Sobic004G337800--Sobic003G405500 Sobic009G131300 Sobic009G131300 Sobic004G337800--Sobic009G131300 Sobic001G214600 Sobic001G214600 Sobic004G337800--Sobic001G214600 Sobic002G227500 Sobic002G227500 Sobic004G337800--Sobic002G227500 Sobic004G337800--Sobic006G021700 Sobic004G337800--Sobic008G124800 Sobic003G264100 Sobic003G264100 Sobic001G333100--Sobic003G264100 Sobic002G020700 Sobic002G020700 Sobic001G333100--Sobic002G020700 Sobic003G221400 Sobic003G221400 Sobic001G333100--Sobic003G221400 Sobic001G192000 Sobic001G192000 Sobic001G333100--Sobic001G192000 Sobic010G020400 Sobic010G020400 Sobic001G333100--Sobic010G020400 Sobic002G142900 Sobic002G142900 Sobic001G333100--Sobic002G142900 Sobic010G223300 Sobic010G223300 Sobic001G333100--Sobic010G223300 Sobic001G251100 Sobic001G251100 Sobic001G333100--Sobic001G251100 Sobic008G033500 Sobic008G033500 Sobic001G333100--Sobic008G033500 Sobic006G021700--Sobic008G124800 Sobic006G077300 Sobic006G077300 Sobic006G021700--Sobic006G077300 Sobic006G021700--Sobic002G340900 Sobic005G059500 Sobic005G059500 Sobic006G021700--Sobic005G059500 Sobic003G209200 Sobic003G209200 Sobic006G021700--Sobic003G209200 Sobic003G346400 Sobic003G346400 Sobic006G021700--Sobic003G346400 Sobic010G000800 Sobic010G000800 Sobic006G021700--Sobic010G000800 Sobic006G021700--Sobic007G005500 Sobic005G110499 Sobic005G110499 Sobic006G021700--Sobic005G110499 Sobic008G185800--Sobic006G093300 Sobic009G192300 Sobic009G192300 Sobic008G185800--Sobic009G192300 Sobic003G241700 Sobic003G241700 Sobic008G185800--Sobic003G241700 Sobic006G184900 Sobic006G184900 Sobic008G185800--Sobic006G184900 Sobic001G030000 Sobic001G030000 Sobic008G185800--Sobic001G030000 Sobic010G226000 Sobic010G226000 Sobic008G185800--Sobic010G226000 Sobic010G275400 Sobic010G275400 Sobic008G185800--Sobic010G275400 Sobic001G503900 Sobic001G503900 Sobic008G185800--Sobic001G503900 Sobic010G169900 Sobic010G169900 Sobic008G185800--Sobic010G169900 Sobic006G039400 Sobic006G039400 Sobic006G093300--Sobic006G039400 Sobic001G434200 Sobic001G434200 Sobic006G093300--Sobic001G434200 Sobic006G093300--Sobic008G185800 Sobic006G093300--Sobic003G241700 Sobic001G283600 Sobic001G283600 Sobic006G093300--Sobic001G283600 Sobic006G093300--Sobic001G333100 Sobic003G308500 Sobic003G308500 Sobic006G093300--Sobic003G308500 Sobic003G296900 Sobic003G296900 Sobic006G093300--Sobic003G296900 Sobic006G093300--Sobic006G184900 Sobic003G114400 Sobic003G114400 Sobic006G260500--Sobic003G114400 Sobic006G260500--Sobic006G077300 Sobic004G241900 Sobic004G241900 Sobic006G260500--Sobic004G241900 Sobic006G260500--Sobic003G209200 Sobic006G260500--Sobic010G223300 Sobic005G062200 Sobic005G062200 Sobic006G260500--Sobic005G062200 Sobic006G260500--Sobic007G005500 Sobic007G075500 Sobic007G075500 Sobic006G260500--Sobic007G075500 Sobic006G260500--Sobic006G021700 Sobic008G037700 Sobic008G037700 Sobic008G176000--Sobic008G037700 Sobic001G118000 Sobic001G118000 Sobic008G176000--Sobic001G118000 Sobic008G176000--Sobic003G346400 Sobic008G176000--Sobic006G021700 Sobic008G176000--Sobic010G169900 Sobic006G128100 Sobic006G128100 Sobic008G176000--Sobic006G128100 Sobic001G156900 Sobic001G156900 Sobic008G176000--Sobic001G156900 Sobic010G192600 Sobic010G192600 Sobic008G176000--Sobic010G192600 Sobic008G176000--Sobic001G030000
Octagon: transcription factors


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