Gene annotation
Transcriptome id Sobic.005G115900.2,Sobic.005G115900.1
Synonym Sb05g016760
Functional annotation OsFBO4 - F-box and other domain containing protein, expressed
UniProt A0A1B6PRT1 , C5Y2F3
Pfam PF01753
Panther DB PTHR12298:SF25 PTHR12298
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G67340 : HCP-like superfamily protein with MYND-type zinc finger
RAP-DB (Rice) LOC_Os11g29710.1 : OsFBO4 - F-box and other domain containing protein, expressed
MaizeGDB (Corn) Zm00025a029732
Brachypodium KQJ82256
Barley HORVU2Hr1G069440.1 , HORVU2Hr1G069440.2
Wheat TraesCS2A02G282300 , TraesCS2A02G282300 , TraesCS2B02G299700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G267300 bg55, putative, expressed -
2 Sobic.005G105000 STE_MEKK_ste11_MAP3K.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
3 Sobic.001G180900 secretory carrier-associated membrane protein 4, putative, expressed -
4 Sobic.009G137800 expressed protein -
5 Sobic.003G379700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Increased expression in phyB-1 mutant(PubMedID : 26893475)@No apical meristem protein, putative, expressed -
6 Sobic.006G106700 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
7 Sobic.003G377800 DNA repair metallo-beta-lactamase, putative, expressed K15340: DCLRE1A, SNM1A, DNA cross-link repair 1A protein
8 Sobic.001G496800 sulfate transporter, putative, expressed K17471: sulfate transporter 3
9 Sobic.003G044200 C2 domain containing protein, putative, expressed -
10 Sobic.002G270200 OsFBX339 - F-box domain containing protein, expressed -
11 Sobic.001G035500 expressed protein -
12 Sobic.009G172400 VHS and GAT domain containing protein, expressed -
13 Sobic.003G413500 expressed protein -
14 Sobic.007G134600 agenet domain containing protein, expressed -
15 Sobic.004G142900 - -
16 Sobic.001G034300 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
17 Sobic.001G372500 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
18 Sobic.008G094400 Nodulin MtN3 family protein(PubMedID : 26465154)@Nodulin MtN3 family protein(PubMedID : 26465154)@Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
19 Sobic.002G405900 zinc finger, RING-type, putative, expressed -
20 Sobic.001G125200 HEAT repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic005G115900 Sobic005G115900 Sobic004G267300 Sobic004G267300 Sobic005G115900--Sobic004G267300 Sobic005G105000 Sobic005G105000 Sobic005G115900--Sobic005G105000 Sobic001G180900 Sobic001G180900 Sobic005G115900--Sobic001G180900 Sobic009G137800 Sobic009G137800 Sobic005G115900--Sobic009G137800 Sobic003G379700 Sobic003G379700 Sobic005G115900--Sobic003G379700 Sobic006G106700 Sobic006G106700 Sobic005G115900--Sobic006G106700 Sobic003G377800 Sobic003G377800 Sobic005G115900--Sobic003G377800 Sobic001G496800 Sobic001G496800 Sobic005G115900--Sobic001G496800 Sobic003G044200 Sobic003G044200 Sobic005G115900--Sobic003G044200 Sobic004G267300--Sobic009G137800 Sobic007G134600 Sobic007G134600 Sobic004G267300--Sobic007G134600 Sobic008G025900 Sobic008G025900 Sobic004G267300--Sobic008G025900 Sobic003G056100 Sobic003G056100 Sobic004G267300--Sobic003G056100 Sobic001G351700 Sobic001G351700 Sobic004G267300--Sobic001G351700 Sobic009G172400 Sobic009G172400 Sobic004G267300--Sobic009G172400 Sobic002G324200 Sobic002G324200 Sobic004G267300--Sobic002G324200 Sobic010G056000 Sobic010G056000 Sobic004G267300--Sobic010G056000 Sobic004G132150 Sobic004G132150 Sobic004G267300--Sobic004G132150 Sobic009G138100 Sobic009G138100 Sobic005G105000--Sobic009G138100 Sobic005G105000--Sobic009G172400 Sobic010G174500 Sobic010G174500 Sobic005G105000--Sobic010G174500 Sobic005G105000--Sobic003G044200 Sobic001G472600 Sobic001G472600 Sobic005G105000--Sobic001G472600 Sobic005G105000--Sobic003G379700 Sobic006G209400 Sobic006G209400 Sobic005G105000--Sobic006G209400 Sobic003G248200 Sobic003G248200 Sobic005G105000--Sobic003G248200 Sobic005G105000--Sobic004G267300 Sobic006G034000 Sobic006G034000 Sobic001G180900--Sobic006G034000 Sobic004G234900 Sobic004G234900 Sobic001G180900--Sobic004G234900 Sobic002G378800 Sobic002G378800 Sobic001G180900--Sobic002G378800 Sobic009G079300 Sobic009G079300 Sobic001G180900--Sobic009G079300 Sobic009G126900 Sobic009G126900 Sobic001G180900--Sobic009G126900 Sobic004G274400 Sobic004G274400 Sobic001G180900--Sobic004G274400 Sobic006G225600 Sobic006G225600 Sobic001G180900--Sobic006G225600 Sobic008G110600 Sobic008G110600 Sobic001G180900--Sobic008G110600 Sobic003G126300 Sobic003G126300 Sobic001G180900--Sobic003G126300 Sobic004G153600 Sobic004G153600 Sobic009G137800--Sobic004G153600 Sobic008G189400 Sobic008G189400 Sobic009G137800--Sobic008G189400 Sobic009G137800--Sobic004G267300 Sobic003G185200 Sobic003G185200 Sobic009G137800--Sobic003G185200 Sobic009G137800--Sobic008G025900 Sobic001G424700 Sobic001G424700 Sobic009G137800--Sobic001G424700 Sobic009G087800 Sobic009G087800 Sobic009G137800--Sobic009G087800 Sobic001G022100 Sobic001G022100 Sobic009G137800--Sobic001G022100 Sobic010G260500 Sobic010G260500 Sobic009G137800--Sobic010G260500 Sobic001G076000 Sobic001G076000 Sobic003G379700--Sobic001G076000 Sobic003G396000 Sobic003G396000 Sobic003G379700--Sobic003G396000 Sobic008G094700 Sobic008G094700 Sobic003G379700--Sobic008G094700 Sobic003G379700--Sobic005G105000 Sobic006G218700 Sobic006G218700 Sobic003G379700--Sobic006G218700 Sobic001G478300 Sobic001G478300 Sobic003G379700--Sobic001G478300 Sobic004G320000 Sobic004G320000 Sobic003G379700--Sobic004G320000 Sobic003G379700--Sobic003G044200 Sobic009G011700 Sobic009G011700 Sobic003G379700--Sobic009G011700 Sobic010G197700 Sobic010G197700 Sobic006G106700--Sobic010G197700 Sobic006G106700--Sobic004G267300 Sobic003G121900 Sobic003G121900 Sobic006G106700--Sobic003G121900 Sobic001G278600 Sobic001G278600 Sobic006G106700--Sobic001G278600 Sobic006G167900 Sobic006G167900 Sobic006G106700--Sobic006G167900 Sobic006G181400 Sobic006G181400 Sobic006G106700--Sobic006G181400 Sobic005G051300 Sobic005G051300 Sobic006G106700--Sobic005G051300 Sobic007G080900 Sobic007G080900 Sobic006G106700--Sobic007G080900 Sobic002G281700 Sobic002G281700 Sobic006G106700--Sobic002G281700 Sobic001G125200 Sobic001G125200 Sobic003G377800--Sobic001G125200 Sobic007G217000 Sobic007G217000 Sobic003G377800--Sobic007G217000 Sobic010G145900 Sobic010G145900 Sobic003G377800--Sobic010G145900 Sobic002G405900 Sobic002G405900 Sobic003G377800--Sobic002G405900 Sobic003G377800--Sobic003G056100 Sobic004G002400 Sobic004G002400 Sobic003G377800--Sobic004G002400 Sobic009G249200 Sobic009G249200 Sobic003G377800--Sobic009G249200 Sobic009G121100 Sobic009G121100 Sobic003G377800--Sobic009G121100 Sobic002G310200 Sobic002G310200 Sobic003G377800--Sobic002G310200 Sobic001G496800--Sobic003G377800 Sobic001G496800--Sobic009G172400 Sobic001G496800--Sobic005G105000 Sobic001G496800--Sobic003G379700 Sobic005G203800 Sobic005G203800 Sobic001G496800--Sobic005G203800 Sobic001G443900 Sobic001G443900 Sobic001G496800--Sobic001G443900 Sobic001G148300 Sobic001G148300 Sobic001G496800--Sobic001G148300 Sobic001G372000 Sobic001G372000 Sobic001G496800--Sobic001G372000 Sobic001G137300 Sobic001G137300 Sobic001G496800--Sobic001G137300 Sobic001G065700 Sobic001G065700 Sobic003G044200--Sobic001G065700 Sobic001G098200 Sobic001G098200 Sobic003G044200--Sobic001G098200 Sobic003G044200--Sobic006G225600 Sobic003G044200--Sobic005G105000 Sobic003G044200--Sobic006G218700 Sobic009G167600 Sobic009G167600 Sobic003G044200--Sobic009G167600 Sobic001G503300 Sobic001G503300 Sobic003G044200--Sobic001G503300 Sobic003G044200--Sobic009G137800 Sobic009G193400 Sobic009G193400 Sobic003G044200--Sobic009G193400
Octagon: transcription factors


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