Gene annotation
Transcriptome id Sobic.005G166000.2
Synonym
Functional annotation OsFBX248 - F-box domain containing protein, expressed
UniProt A0A1Z5RJV8
Pfam -
Panther DB PTHR32212 PTHR32212:SF91
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G04230 : FBD, F-box and Leucine Rich Repeat domains containing protein
RAP-DB (Rice) LOC_Os07g36520.1 : OsFBX248 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a028820
Brachypodium PNT77178
Barley -
Wheat TraesCS3A02G024000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G331000 exostosin family domain containing protein, expressed -
2 Sobic.003G304800 OsRhmbd4 - Putative Rhomboid homologue, expressed -
3 Sobic.005G067400 - -
4 Sobic.003G259600 ORC4 - Putative origin recognition complex subunit 4, expressed K02606: origin recognition complex subunit 4
5 Sobic.006G282200 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit precursor, putative, expressed K12666: OST1, oligosaccharyltransferase complex subunit alpha (ribophorin I)
6 Sobic.002G115500 PHD finger protein, putative, expressed -
7 Sobic.007G010200 - -
8 Sobic.007G017200 OsFBX142 - F-box domain containing protein, expressed -
9 Sobic.010G051400 zinc finger protein, putative, expressed K04706: E3 SUMO-protein ligase PIAS1
10 Sobic.004G151200 RNA-binding protein-like, putative, expressed -
11 Sobic.001G242300 expressed protein -
12 Sobic.009G101000 - -
13 Sobic.001G051400 aminoacyl-tRNA synthetase, putative, expressed -
14 Sobic.002G223800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
15 Sobic.002G123600 expressed protein -
16 Sobic.004G277400 glucosyltransferase, putative, expressed K03849: alpha-1,3-glucosyltransferase
17 Sobic.007G051400 transmembrane 9 superfamily member, putative, expressed -
18 Sobic.010G152600 - -
19 Sobic.003G361400 nsp1-like C-terminal region family protein, expressed K14306: NUP62, nuclear pore complex protein Nup62
20 Sobic.008G112100 Phospholipid synthesis protein 1 PLS1 (Zm)(PubMedID : 27208977)@acyltransferase, putative, expressed K13523: lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase


Gene co-expression network
sample Sobic005G166000 Sobic005G166000 Sobic003G331000 Sobic003G331000 Sobic005G166000--Sobic003G331000 Sobic003G304800 Sobic003G304800 Sobic005G166000--Sobic003G304800 Sobic005G067400 Sobic005G067400 Sobic005G166000--Sobic005G067400 Sobic003G259600 Sobic003G259600 Sobic005G166000--Sobic003G259600 Sobic006G282200 Sobic006G282200 Sobic005G166000--Sobic006G282200 Sobic002G115500 Sobic002G115500 Sobic005G166000--Sobic002G115500 Sobic007G010200 Sobic007G010200 Sobic005G166000--Sobic007G010200 Sobic007G017200 Sobic007G017200 Sobic005G166000--Sobic007G017200 Sobic010G051400 Sobic010G051400 Sobic005G166000--Sobic010G051400 Sobic003G331000--Sobic003G259600 Sobic009G122900 Sobic009G122900 Sobic003G331000--Sobic009G122900 Sobic003G028400 Sobic003G028400 Sobic003G331000--Sobic003G028400 Sobic002G123600 Sobic002G123600 Sobic003G331000--Sobic002G123600 Sobic001G123600 Sobic001G123600 Sobic003G331000--Sobic001G123600 Sobic001G242300 Sobic001G242300 Sobic003G331000--Sobic001G242300 Sobic005G160200 Sobic005G160200 Sobic003G331000--Sobic005G160200 Sobic003G298900 Sobic003G298900 Sobic003G331000--Sobic003G298900 Sobic003G360300 Sobic003G360300 Sobic003G331000--Sobic003G360300 Sobic003G304800--Sobic009G122900 Sobic003G304800--Sobic007G010200 Sobic001G472100 Sobic001G472100 Sobic003G304800--Sobic001G472100 Sobic008G112100 Sobic008G112100 Sobic003G304800--Sobic008G112100 Sobic003G304800--Sobic003G331000 Sobic007G036800 Sobic007G036800 Sobic003G304800--Sobic007G036800 Sobic009G060400 Sobic009G060400 Sobic003G304800--Sobic009G060400 Sobic003G304800--Sobic005G160200 Sobic001G425200 Sobic001G425200 Sobic003G304800--Sobic001G425200 Sobic008G168700 Sobic008G168700 Sobic005G067400--Sobic008G168700 Sobic005G067400--Sobic007G010200 Sobic001G538100 Sobic001G538100 Sobic005G067400--Sobic001G538100 Sobic005G127900 Sobic005G127900 Sobic005G067400--Sobic005G127900 Sobic005G115400 Sobic005G115400 Sobic005G067400--Sobic005G115400 Sobic005G067400--Sobic005G166000 Sobic002G175400 Sobic002G175400 Sobic005G067400--Sobic002G175400 Sobic002G220200 Sobic002G220200 Sobic005G067400--Sobic002G220200 Sobic009G085300 Sobic009G085300 Sobic005G067400--Sobic009G085300 Sobic003G361400 Sobic003G361400 Sobic003G259600--Sobic003G361400 Sobic003G259600--Sobic003G360300 Sobic001G373000 Sobic001G373000 Sobic003G259600--Sobic001G373000 Sobic003G259600--Sobic003G331000 Sobic004G038100 Sobic004G038100 Sobic003G259600--Sobic004G038100 Sobic010G269300 Sobic010G269300 Sobic003G259600--Sobic010G269300 Sobic003G259600--Sobic003G028400 Sobic002G142700 Sobic002G142700 Sobic003G259600--Sobic002G142700 Sobic001G334100 Sobic001G334100 Sobic003G259600--Sobic001G334100 Sobic006G265600 Sobic006G265600 Sobic006G282200--Sobic006G265600 Sobic003G397900 Sobic003G397900 Sobic006G282200--Sobic003G397900 Sobic010G192600 Sobic010G192600 Sobic006G282200--Sobic010G192600 Sobic001G474400 Sobic001G474400 Sobic006G282200--Sobic001G474400 Sobic003G304400 Sobic003G304400 Sobic006G282200--Sobic003G304400 Sobic002G343200 Sobic002G343200 Sobic006G282200--Sobic002G343200 Sobic002G199400 Sobic002G199400 Sobic006G282200--Sobic002G199400 Sobic003G150900 Sobic003G150900 Sobic006G282200--Sobic003G150900 Sobic004G151200 Sobic004G151200 Sobic006G282200--Sobic004G151200 Sobic009G040800 Sobic009G040800 Sobic002G115500--Sobic009G040800 Sobic009G000400 Sobic009G000400 Sobic002G115500--Sobic009G000400 Sobic009G260650 Sobic009G260650 Sobic002G115500--Sobic009G260650 Sobic006G281700 Sobic006G281700 Sobic002G115500--Sobic006G281700 Sobic005G040900 Sobic005G040900 Sobic002G115500--Sobic005G040900 Sobic009G122500 Sobic009G122500 Sobic002G115500--Sobic009G122500 Sobic003G240700 Sobic003G240700 Sobic002G115500--Sobic003G240700 Sobic006G224300 Sobic006G224300 Sobic002G115500--Sobic006G224300 Sobic004G345400 Sobic004G345400 Sobic002G115500--Sobic004G345400 Sobic004G229000 Sobic004G229000 Sobic007G010200--Sobic004G229000 Sobic007G010200--Sobic008G112100 Sobic007G031100 Sobic007G031100 Sobic007G010200--Sobic007G031100 Sobic007G010200--Sobic007G036800 Sobic007G140100 Sobic007G140100 Sobic007G010200--Sobic007G140100 Sobic009G054400 Sobic009G054400 Sobic007G010200--Sobic009G054400 Sobic007G010200--Sobic003G304800 Sobic001G309200 Sobic001G309200 Sobic007G010200--Sobic001G309200 Sobic010G018900 Sobic010G018900 Sobic007G010200--Sobic010G018900 Sobic001G033900 Sobic001G033900 Sobic007G017200--Sobic001G033900 Sobic006G140400 Sobic006G140400 Sobic007G017200--Sobic006G140400 Sobic001G004100 Sobic001G004100 Sobic007G017200--Sobic001G004100 Sobic004G031300 Sobic004G031300 Sobic007G017200--Sobic004G031300 Sobic001G013300 Sobic001G013300 Sobic007G017200--Sobic001G013300 Sobic006G245900 Sobic006G245900 Sobic007G017200--Sobic006G245900 Sobic007G017200--Sobic003G259600 Sobic007G016900 Sobic007G016900 Sobic007G017200--Sobic007G016900 Sobic004G020100 Sobic004G020100 Sobic007G017200--Sobic004G020100 Sobic010G051400--Sobic010G269300 Sobic007G159200 Sobic007G159200 Sobic010G051400--Sobic007G159200 Sobic008G080500 Sobic008G080500 Sobic010G051400--Sobic008G080500 Sobic001G051700 Sobic001G051700 Sobic010G051400--Sobic001G051700 Sobic009G129600 Sobic009G129600 Sobic010G051400--Sobic009G129600 Sobic009G003700 Sobic009G003700 Sobic010G051400--Sobic009G003700 Sobic007G183300 Sobic007G183300 Sobic010G051400--Sobic007G183300 Sobic002G145800 Sobic002G145800 Sobic010G051400--Sobic002G145800 Sobic010G077500 Sobic010G077500 Sobic010G051400--Sobic010G077500
Octagon: transcription factors


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