Gene annotation
Transcriptome id Sobic.010G152600.1,Sobic.010G152600.4,Sobic.010G152600.2,Sobic.010G152600.3
Synonym
Functional annotation -
UniProt A0A194YJC9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G220200 formate--tetrahydrofolate ligase, putative, expressed K01938: formate--tetrahydrofolate ligase
2 Sobic.003G304800 OsRhmbd4 - Putative Rhomboid homologue, expressed -
3 Sobic.003G246000 exosome complex exonuclease RRP40, putative, expressed K03681: RRP40, exosome complex component RRP40
4 Sobic.007G031100 RNA polymerase II complex component SRB7, putative, expressed K15152: MED21, mediator of RNA polymerase II transcription subunit 21
5 Sobic.006G282200 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit precursor, putative, expressed K12666: OST1, oligosaccharyltransferase complex subunit alpha (ribophorin I)
6 Sobic.010G278600 FG-GAP repeat-containing protein, putative, expressed -
7 Sobic.009G122900 alpha 1,3-xylosyltransferase, putative, expressed K11714: rhamnogalacturonan II specific xylosyltransferase
8 Sobic.002G263700 bromodomain protein 103, putative, expressed -
9 Sobic.003G058900 TATA-binding protein-associated factor 2N, putative, expressed K13098: TLS, RNA-binding protein FUS
10 Sobic.002G386600 heat shock protein DnaJ, putative, expressed -
11 Sobic.001G051400 aminoacyl-tRNA synthetase, putative, expressed -
12 Sobic.006G265600 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
13 Sobic.009G131500 aquaporin protein, putative, expressed K09875: aquaporin SIP
14 Sobic.006G103700 tRNA synthetase, putative, expressed K01866: YARS, tyrosyl-tRNA synthetase
15 Sobic.002G386900 pseudouridylate synthase, putative, expressed K06176: truD, tRNA pseudouridine13 synthase
16 Sobic.001G085800 WD domain, G-beta repeat domain containing protein, expressed K14406: cleavage stimulation factor subunit 1
17 Sobic.009G059400 expressed protein -
18 Sobic.004G194100 expressed protein -
19 Sobic.005G025300 dehydrogenase-phosphopantetheinyltransferase, putative, expressed K06133: LYS5, 4'-phosphopantetheinyl transferase
20 Sobic.001G335500 RNA-binding protein-like, putative, expressed -


Gene co-expression network
sample Sobic010G152600 Sobic010G152600 Sobic002G220200 Sobic002G220200 Sobic010G152600--Sobic002G220200 Sobic003G304800 Sobic003G304800 Sobic010G152600--Sobic003G304800 Sobic003G246000 Sobic003G246000 Sobic010G152600--Sobic003G246000 Sobic007G031100 Sobic007G031100 Sobic010G152600--Sobic007G031100 Sobic006G282200 Sobic006G282200 Sobic010G152600--Sobic006G282200 Sobic010G278600 Sobic010G278600 Sobic010G152600--Sobic010G278600 Sobic009G122900 Sobic009G122900 Sobic010G152600--Sobic009G122900 Sobic002G263700 Sobic002G263700 Sobic010G152600--Sobic002G263700 Sobic003G058900 Sobic003G058900 Sobic010G152600--Sobic003G058900 Sobic002G343200 Sobic002G343200 Sobic002G220200--Sobic002G343200 Sobic003G393200 Sobic003G393200 Sobic002G220200--Sobic003G393200 Sobic007G153500 Sobic007G153500 Sobic002G220200--Sobic007G153500 Sobic009G112300 Sobic009G112300 Sobic002G220200--Sobic009G112300 Sobic002G220200--Sobic006G282200 Sobic002G220200--Sobic010G152600 Sobic009G059400 Sobic009G059400 Sobic002G220200--Sobic009G059400 Sobic010G192600 Sobic010G192600 Sobic002G220200--Sobic010G192600 Sobic005G198200 Sobic005G198200 Sobic002G220200--Sobic005G198200 Sobic003G304800--Sobic009G122900 Sobic007G010200 Sobic007G010200 Sobic003G304800--Sobic007G010200 Sobic001G472100 Sobic001G472100 Sobic003G304800--Sobic001G472100 Sobic008G112100 Sobic008G112100 Sobic003G304800--Sobic008G112100 Sobic003G331000 Sobic003G331000 Sobic003G304800--Sobic003G331000 Sobic007G036800 Sobic007G036800 Sobic003G304800--Sobic007G036800 Sobic009G060400 Sobic009G060400 Sobic003G304800--Sobic009G060400 Sobic005G160200 Sobic005G160200 Sobic003G304800--Sobic005G160200 Sobic001G425200 Sobic001G425200 Sobic003G304800--Sobic001G425200 Sobic001G085800 Sobic001G085800 Sobic003G246000--Sobic001G085800 Sobic001G408600 Sobic001G408600 Sobic003G246000--Sobic001G408600 Sobic004G141800 Sobic004G141800 Sobic003G246000--Sobic004G141800 Sobic002G430300 Sobic002G430300 Sobic003G246000--Sobic002G430300 Sobic001G145400 Sobic001G145400 Sobic003G246000--Sobic001G145400 Sobic002G386600 Sobic002G386600 Sobic003G246000--Sobic002G386600 Sobic006G125900 Sobic006G125900 Sobic003G246000--Sobic006G125900 Sobic002G160700 Sobic002G160700 Sobic003G246000--Sobic002G160700 Sobic005G199200 Sobic005G199200 Sobic003G246000--Sobic005G199200 Sobic007G031100--Sobic007G010200 Sobic001G432100 Sobic001G432100 Sobic007G031100--Sobic001G432100 Sobic002G280900 Sobic002G280900 Sobic007G031100--Sobic002G280900 Sobic003G410200 Sobic003G410200 Sobic007G031100--Sobic003G410200 Sobic003G085500 Sobic003G085500 Sobic007G031100--Sobic003G085500 Sobic001G188700 Sobic001G188700 Sobic007G031100--Sobic001G188700 Sobic002G422400 Sobic002G422400 Sobic007G031100--Sobic002G422400 Sobic006G245700 Sobic006G245700 Sobic007G031100--Sobic006G245700 Sobic009G232500 Sobic009G232500 Sobic007G031100--Sobic009G232500 Sobic006G265600 Sobic006G265600 Sobic006G282200--Sobic006G265600 Sobic003G397900 Sobic003G397900 Sobic006G282200--Sobic003G397900 Sobic006G282200--Sobic010G192600 Sobic001G474400 Sobic001G474400 Sobic006G282200--Sobic001G474400 Sobic003G304400 Sobic003G304400 Sobic006G282200--Sobic003G304400 Sobic006G282200--Sobic002G343200 Sobic002G199400 Sobic002G199400 Sobic006G282200--Sobic002G199400 Sobic003G150900 Sobic003G150900 Sobic006G282200--Sobic003G150900 Sobic004G151200 Sobic004G151200 Sobic006G282200--Sobic004G151200 Sobic009G040800 Sobic009G040800 Sobic010G278600--Sobic009G040800 Sobic009G074700 Sobic009G074700 Sobic010G278600--Sobic009G074700 Sobic002G408600 Sobic002G408600 Sobic010G278600--Sobic002G408600 Sobic004G285000 Sobic004G285000 Sobic010G278600--Sobic004G285000 Sobic004G236800 Sobic004G236800 Sobic010G278600--Sobic004G236800 Sobic004G246100 Sobic004G246100 Sobic010G278600--Sobic004G246100 Sobic001G042200 Sobic001G042200 Sobic010G278600--Sobic001G042200 Sobic006G131200 Sobic006G131200 Sobic010G278600--Sobic006G131200 Sobic001G393700 Sobic001G393700 Sobic010G278600--Sobic001G393700 Sobic009G122900--Sobic003G304800 Sobic009G122900--Sobic003G331000 Sobic008G125100 Sobic008G125100 Sobic009G122900--Sobic008G125100 Sobic001G242300 Sobic001G242300 Sobic009G122900--Sobic001G242300 Sobic003G028400 Sobic003G028400 Sobic009G122900--Sobic003G028400 Sobic001G296800 Sobic001G296800 Sobic009G122900--Sobic001G296800 Sobic003G298900 Sobic003G298900 Sobic009G122900--Sobic003G298900 Sobic005G064100 Sobic005G064100 Sobic009G122900--Sobic005G064100 Sobic009G122900--Sobic005G160200 Sobic010G269300 Sobic010G269300 Sobic002G263700--Sobic010G269300 Sobic002G263700--Sobic004G141800 Sobic002G263700--Sobic004G285000 Sobic004G111000 Sobic004G111000 Sobic002G263700--Sobic004G111000 Sobic002G063900 Sobic002G063900 Sobic002G263700--Sobic002G063900 Sobic006G280100 Sobic006G280100 Sobic002G263700--Sobic006G280100 Sobic006G245900 Sobic006G245900 Sobic002G263700--Sobic006G245900 Sobic003G016500 Sobic003G016500 Sobic002G263700--Sobic003G016500 Sobic004G309900 Sobic004G309900 Sobic002G263700--Sobic004G309900 Sobic001G099800 Sobic001G099800 Sobic003G058900--Sobic001G099800 Sobic004G095300 Sobic004G095300 Sobic003G058900--Sobic004G095300 Sobic010G171100 Sobic010G171100 Sobic003G058900--Sobic010G171100 Sobic007G180000 Sobic007G180000 Sobic003G058900--Sobic007G180000 Sobic008G125000 Sobic008G125000 Sobic003G058900--Sobic008G125000 Sobic002G058700 Sobic002G058700 Sobic003G058900--Sobic002G058700 Sobic004G117800 Sobic004G117800 Sobic003G058900--Sobic004G117800 Sobic001G144600 Sobic001G144600 Sobic003G058900--Sobic001G144600 Sobic001G335500 Sobic001G335500 Sobic003G058900--Sobic001G335500
Octagon: transcription factors


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