Gene annotation
Transcriptome id Sobic.005G207300.1
Synonym Sb05g026165, scpl50
Functional annotation OsSCP29 - Putative Serine Carboxypeptidase homologue, expressed
UniProt A0A1Z5RK48
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF58
NCBI CDD KOG1282; Serine carboxypeptidases (lysosomal cathepsin A)
KEGG Orthology K09645; vitellogenic carboxypeptidase-like protein
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT1G15000 : serine carboxypeptidase-like 50
RAP-DB (Rice) LOC_Os05g50580.1 : OsSCP30 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a029180
Brachypodium KQK04697
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G271400 expressed protein -
2 Sobic.010G009900 - -
3 Sobic.008G140900 expressed protein -
4 Sobic.001G428600 nodulation-signaling pathway 2 protein, putative, expressed -
5 Sobic.007G077600 MBTB20 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
6 Sobic.009G116600 C2 domain containing protein, putative, expressed -
7 Sobic.003G060000 Cupin domain containing protein, expressed -
8 Sobic.005G163800 laccase precursor protein, putative, expressed K05909: laccase
9 Sobic.001G506750 - -
10 Sobic.004G165100 Up-regulation in phyB-1 mutant(PubMedID : 26893475)@RCN2 Centroradialis-like1 homologous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
11 Sobic.002G012400 DUF538 domain containing protein, putative, expressed -
12 Sobic.001G114900 - -
13 Sobic.003G414900 DUF567 domain containing protein, putative, expressed -
14 Sobic.006G202600 Up-reguralion under heat(PubMedID : 24916767)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
15 Sobic.005G192200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@key enzymes in the phenylptropanoid pathway(PubMedID : 28119720)@cytokinin-O-glucosyltransferase 3, putative, expressed -
16 Sobic.008G158332 - -
17 Sobic.008G137300 RALFL43 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
18 Sobic.008G172500 ATCHX, putative, expressed -
19 Sobic.002G090900 cytochrome P450, putative, expressed -
20 Sobic.005G088400 cytochrome P450, putative, expressed K09755: CYP84A, ferulate-5-hydroxylase


Gene co-expression network
sample Sobic005G207300 Sobic005G207300 Sobic010G271400 Sobic010G271400 Sobic005G207300--Sobic010G271400 Sobic010G009900 Sobic010G009900 Sobic005G207300--Sobic010G009900 Sobic008G140900 Sobic008G140900 Sobic005G207300--Sobic008G140900 Sobic001G428600 Sobic001G428600 Sobic005G207300--Sobic001G428600 Sobic007G077600 Sobic007G077600 Sobic005G207300--Sobic007G077600 Sobic009G116600 Sobic009G116600 Sobic005G207300--Sobic009G116600 Sobic003G060000 Sobic003G060000 Sobic005G207300--Sobic003G060000 Sobic005G163800 Sobic005G163800 Sobic005G207300--Sobic005G163800 Sobic001G506750 Sobic001G506750 Sobic005G207300--Sobic001G506750 Sobic004G292600 Sobic004G292600 Sobic010G271400--Sobic004G292600 Sobic005G011900 Sobic005G011900 Sobic010G271400--Sobic005G011900 Sobic001G539300 Sobic001G539300 Sobic010G271400--Sobic001G539300 Sobic007G054900 Sobic007G054900 Sobic010G271400--Sobic007G054900 Sobic010G009900--Sobic007G054900 Sobic006G050800 Sobic006G050800 Sobic010G009900--Sobic006G050800 Sobic010G009900--Sobic009G116600 Sobic001G242000 Sobic001G242000 Sobic010G009900--Sobic001G242000 SobicK026900 SobicK026900 Sobic010G009900--SobicK026900 Sobic010G045500 Sobic010G045500 Sobic010G009900--Sobic010G045500 Sobic002G369400 Sobic002G369400 Sobic010G009900--Sobic002G369400 Sobic003G136200 Sobic003G136200 Sobic010G009900--Sobic003G136200 Sobic002G012300 Sobic002G012300 Sobic010G009900--Sobic002G012300 Sobic006G268500 Sobic006G268500 Sobic008G140900--Sobic006G268500 Sobic009G157450 Sobic009G157450 Sobic008G140900--Sobic009G157450 Sobic009G071000 Sobic009G071000 Sobic008G140900--Sobic009G071000 Sobic008G158332 Sobic008G158332 Sobic008G140900--Sobic008G158332 Sobic006G227750 Sobic006G227750 Sobic008G140900--Sobic006G227750 Sobic002G422300 Sobic002G422300 Sobic008G140900--Sobic002G422300 Sobic001G162233 Sobic001G162233 Sobic008G140900--Sobic001G162233 Sobic006G026500 Sobic006G026500 Sobic008G140900--Sobic006G026500 Sobic002G010900 Sobic002G010900 Sobic008G140900--Sobic002G010900 Sobic006G202600 Sobic006G202600 Sobic001G428600--Sobic006G202600 Sobic001G508532 Sobic001G508532 Sobic001G428600--Sobic001G508532 Sobic001G237900 Sobic001G237900 Sobic001G428600--Sobic001G237900 Sobic010G196000 Sobic010G196000 Sobic001G428600--Sobic010G196000 Sobic008G127933 Sobic008G127933 Sobic001G428600--Sobic008G127933 Sobic005G213600 Sobic005G213600 Sobic001G428600--Sobic005G213600 Sobic003G053300 Sobic003G053300 Sobic001G428600--Sobic003G053300 Sobic006G158400 Sobic006G158400 Sobic001G428600--Sobic006G158400 Sobic010G158500 Sobic010G158500 Sobic001G428600--Sobic010G158500 Sobic006G056300 Sobic006G056300 Sobic007G077600--Sobic006G056300 Sobic001G309666 Sobic001G309666 Sobic007G077600--Sobic001G309666 Sobic010G083300 Sobic010G083300 Sobic007G077600--Sobic010G083300 Sobic005G186200 Sobic005G186200 Sobic007G077600--Sobic005G186200 Sobic007G077600--Sobic005G207300 Sobic008G161900 Sobic008G161900 Sobic007G077600--Sobic008G161900 Sobic009G149000 Sobic009G149000 Sobic007G077600--Sobic009G149000 Sobic005G183700 Sobic005G183700 Sobic007G077600--Sobic005G183700 Sobic002G172300 Sobic002G172300 Sobic007G077600--Sobic002G172300 Sobic009G116600--Sobic010G009900 Sobic008G177400 Sobic008G177400 Sobic009G116600--Sobic008G177400 Sobic009G116600--Sobic006G050800 Sobic002G301900 Sobic002G301900 Sobic009G116600--Sobic002G301900 Sobic006G234466 Sobic006G234466 Sobic009G116600--Sobic006G234466 Sobic009G116600--Sobic007G054900 Sobic009G116600--SobicK026900 Sobic004G299600 Sobic004G299600 Sobic009G116600--Sobic004G299600 Sobic004G301600 Sobic004G301600 Sobic009G116600--Sobic004G301600 Sobic003G060000--SobicK026900 Sobic001G114900 Sobic001G114900 Sobic003G060000--Sobic001G114900 Sobic008G027600 Sobic008G027600 Sobic003G060000--Sobic008G027600 Sobic003G060000--Sobic010G009900 Sobic003G060000--Sobic010G158500 Sobic003G073460 Sobic003G073460 Sobic003G060000--Sobic003G073460 Sobic005G066100 Sobic005G066100 Sobic003G060000--Sobic005G066100 Sobic003G060000--Sobic006G158400 Sobic004G202400 Sobic004G202400 Sobic003G060000--Sobic004G202400 Sobic002G412600 Sobic002G412600 Sobic005G163800--Sobic002G412600 Sobic004G180700 Sobic004G180700 Sobic005G163800--Sobic004G180700 Sobic001G293000 Sobic001G293000 Sobic005G163800--Sobic001G293000 Sobic002G090900 Sobic002G090900 Sobic005G163800--Sobic002G090900 Sobic005G163800--Sobic006G202600 Sobic005G163800--Sobic004G301600 Sobic006G170600 Sobic006G170600 Sobic005G163800--Sobic006G170600 Sobic010G146300 Sobic010G146300 Sobic005G163800--Sobic010G146300 Sobic002G122400 Sobic002G122400 Sobic005G163800--Sobic002G122400 Sobic005G192200 Sobic005G192200 Sobic001G506750--Sobic005G192200 Sobic002G093700 Sobic002G093700 Sobic001G506750--Sobic002G093700 Sobic002G124500 Sobic002G124500 Sobic001G506750--Sobic002G124500 Sobic001G348300 Sobic001G348300 Sobic001G506750--Sobic001G348300 Sobic001G506750--Sobic009G157450 Sobic007G118800 Sobic007G118800 Sobic001G506750--Sobic007G118800 Sobic001G506750--Sobic005G066100 Sobic001G506750--Sobic006G268500 Sobic002G425000 Sobic002G425000 Sobic001G506750--Sobic002G425000
Octagon: transcription factors


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