Gene annotation
Transcriptome id Sobic.005G214400.1
Synonym ATGPAT2, GPAT2, Sb05g026580
Functional annotation glycerol-3-phosphate acyltransferase, putative, expressed
UniProt C5Y7X7
Pfam PF01553
Panther DB PTHR15486 PTHR15486:SF21
NCBI CDD -
KEGG Orthology K13508; glycerol-3-phosphate acyltransferase
Gene Ontology GO:0016746; transferase activity, transferring acyl groups GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT4G01950 : glycerol-3-phosphate acyltransferase 3
RAP-DB (Rice) LOC_Os11g45400.1 : glycerol-3-phosphate acyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a008905 , Zm00025a015955 , Zm00025a025460
Brachypodium KQK08403 , KQJ98500 , KQJ98439
Barley HORVU3Hr1G056830.3 , HORVU3Hr1G056830.2 , HORVU3Hr1G056830.1 , HORVU3Hr1G056830.4 , HORVU3Hr1G084990.2 , HORVU3Hr1G084990.1 , HORVU3Hr1G080190.3 , HORVU3Hr1G080190.2 , HORVU3Hr1G080190.1 , HORVU5Hr1G022500.1 , HORVU3Hr1G080190.4 , HORVU5Hr1G022500.2 , HORVU4Hr1G089610.1 , HORVU4Hr1G089610.2
Wheat TraesCS3B02G400000 , TraesCS5B02G092200 , TraesCS3B02G371300 , TraesCS4A02G171600 , TraesCS3A02G339700 , TraesCS3D02G225300 , TraesCS3A02G368400 , TraesCS4B02G066500 , TraesCS3A02G227400 , TraesCS4D02G143600 , TraesCSU02G069100 , TraesCS3D02G361300 , TraesCS3D02G333200 , TraesCSU02G033700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G018100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pollen ankyrin, putative, expressed K19044: E3 ubiquitin-protein ligase XBAT32/33
2 Sobic.008G190900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thioesterase family protein, putative, expressed -
3 Sobic.006G115300 amino acid transporter, putative, expressed -
4 Sobic.010G162900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
5 Sobic.002G116800 expressed protein -
6 Sobic.003G252300 universal stress protein domain containing protein, putative, expressed -
7 Sobic.002G409900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@spo0B-associated GTP-binding protein, putative, expressed -
8 Sobic.002G274800 "senescence-inducible chloroplast stay-green protein, GenBank annotation:AY850140"(PubMedID : 17513504)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@senescence-inducible chloroplast stay-green protein 1, putative, expressed -
9 Sobic.001G034300 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
10 Sobic.001G235500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
11 Sobic.008G189200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
12 Sobic.010G043400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.010G080100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@integral membrane protein DUF6 containing protein, expressed -
14 Sobic.003G276000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@WRKY26, expressed -
15 Sobic.004G182600 expressed protein -
16 Sobic.006G185500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized membrane protein, putative, expressed -
17 Sobic.010G255500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@exostosin, putative, expressed -
18 Sobic.001G521500 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
19 Sobic.001G312900 transporter family protein, putative, expressed -
20 Sobic.004G004200 expressed protein -


Gene co-expression network
sample Sobic005G214400 Sobic005G214400 Sobic010G018100 Sobic010G018100 Sobic005G214400--Sobic010G018100 Sobic008G190900 Sobic008G190900 Sobic005G214400--Sobic008G190900 Sobic006G115300 Sobic006G115300 Sobic005G214400--Sobic006G115300 Sobic010G162900 Sobic010G162900 Sobic005G214400--Sobic010G162900 Sobic002G116800 Sobic002G116800 Sobic005G214400--Sobic002G116800 Sobic003G252300 Sobic003G252300 Sobic005G214400--Sobic003G252300 Sobic002G409900 Sobic002G409900 Sobic005G214400--Sobic002G409900 Sobic002G274800 Sobic002G274800 Sobic005G214400--Sobic002G274800 Sobic001G034300 Sobic001G034300 Sobic005G214400--Sobic001G034300 Sobic010G043400 Sobic010G043400 Sobic010G018100--Sobic010G043400 Sobic001G222200 Sobic001G222200 Sobic010G018100--Sobic001G222200 Sobic010G018100--Sobic002G274800 Sobic004G124200 Sobic004G124200 Sobic010G018100--Sobic004G124200 Sobic001G320200 Sobic001G320200 Sobic010G018100--Sobic001G320200 Sobic003G363100 Sobic003G363100 Sobic010G018100--Sobic003G363100 Sobic008G189200 Sobic008G189200 Sobic010G018100--Sobic008G189200 Sobic003G388251 Sobic003G388251 Sobic010G018100--Sobic003G388251 Sobic002G215800 Sobic002G215800 Sobic010G018100--Sobic002G215800 Sobic008G190900--Sobic008G189200 Sobic003G105800 Sobic003G105800 Sobic008G190900--Sobic003G105800 Sobic008G190900--Sobic003G252300 Sobic008G190900--Sobic002G274800 Sobic006G086100 Sobic006G086100 Sobic008G190900--Sobic006G086100 Sobic004G162400 Sobic004G162400 Sobic008G190900--Sobic004G162400 Sobic002G172900 Sobic002G172900 Sobic008G190900--Sobic002G172900 Sobic009G126900 Sobic009G126900 Sobic008G190900--Sobic009G126900 Sobic007G225900 Sobic007G225900 Sobic008G190900--Sobic007G225900 Sobic009G118600 Sobic009G118600 Sobic006G115300--Sobic009G118600 Sobic007G131700 Sobic007G131700 Sobic006G115300--Sobic007G131700 Sobic003G252400 Sobic003G252400 Sobic006G115300--Sobic003G252400 Sobic001G235500 Sobic001G235500 Sobic006G115300--Sobic001G235500 Sobic006G115300--Sobic003G252300 Sobic004G236550 Sobic004G236550 Sobic006G115300--Sobic004G236550 Sobic003G272400 Sobic003G272400 Sobic006G115300--Sobic003G272400 Sobic001G521500 Sobic001G521500 Sobic006G115300--Sobic001G521500 Sobic003G126300 Sobic003G126300 Sobic006G115300--Sobic003G126300 Sobic003G276000 Sobic003G276000 Sobic010G162900--Sobic003G276000 Sobic007G035000 Sobic007G035000 Sobic010G162900--Sobic007G035000 Sobic010G162900--Sobic008G189200 Sobic010G162900--Sobic008G190900 Sobic005G217200 Sobic005G217200 Sobic010G162900--Sobic005G217200 Sobic001G454200 Sobic001G454200 Sobic010G162900--Sobic001G454200 Sobic010G162900--Sobic010G018100 Sobic010G162900--Sobic007G225900 Sobic010G162900--Sobic002G274800 Sobic007G189500 Sobic007G189500 Sobic002G116800--Sobic007G189500 Sobic006G213500 Sobic006G213500 Sobic002G116800--Sobic006G213500 Sobic002G140700 Sobic002G140700 Sobic002G116800--Sobic002G140700 Sobic008G003900 Sobic008G003900 Sobic002G116800--Sobic008G003900 Sobic004G238900 Sobic004G238900 Sobic002G116800--Sobic004G238900 Sobic007G161800 Sobic007G161800 Sobic002G116800--Sobic007G161800 Sobic001G261200 Sobic001G261200 Sobic002G116800--Sobic001G261200 Sobic010G168301 Sobic010G168301 Sobic002G116800--Sobic010G168301 Sobic009G094900 Sobic009G094900 Sobic002G116800--Sobic009G094900 Sobic003G252300--Sobic002G274800 Sobic005G216000 Sobic005G216000 Sobic003G252300--Sobic005G216000 Sobic003G252300--Sobic003G105800 Sobic003G252300--Sobic006G115300 Sobic003G252300--Sobic008G190900 Sobic003G252300--Sobic004G162400 Sobic003G252300--Sobic008G189200 Sobic003G252300--Sobic007G225900 Sobic001G092000 Sobic001G092000 Sobic003G252300--Sobic001G092000 Sobic001G445200 Sobic001G445200 Sobic002G409900--Sobic001G445200 Sobic005G009300 Sobic005G009300 Sobic002G409900--Sobic005G009300 Sobic007G027000 Sobic007G027000 Sobic002G409900--Sobic007G027000 Sobic002G156100 Sobic002G156100 Sobic002G409900--Sobic002G156100 Sobic003G345900 Sobic003G345900 Sobic002G409900--Sobic003G345900 Sobic001G293300 Sobic001G293300 Sobic002G409900--Sobic001G293300 Sobic003G162800 Sobic003G162800 Sobic002G409900--Sobic003G162800 Sobic003G158300 Sobic003G158300 Sobic002G409900--Sobic003G158300 Sobic002G404900 Sobic002G404900 Sobic002G409900--Sobic002G404900 Sobic002G274800--Sobic010G043400 Sobic002G274800--Sobic007G225900 Sobic002G274800--Sobic003G252300 Sobic002G274800--Sobic003G105800 Sobic002G249200 Sobic002G249200 Sobic002G274800--Sobic002G249200 Sobic002G274800--Sobic008G189200 Sobic009G161000 Sobic009G161000 Sobic002G274800--Sobic009G161000 Sobic002G274800--Sobic004G124200 Sobic001G282600 Sobic001G282600 Sobic002G274800--Sobic001G282600 Sobic001G251200 Sobic001G251200 Sobic001G034300--Sobic001G251200 Sobic004G004200 Sobic004G004200 Sobic001G034300--Sobic004G004200 Sobic002G119700 Sobic002G119700 Sobic001G034300--Sobic002G119700 Sobic009G138200 Sobic009G138200 Sobic001G034300--Sobic009G138200 Sobic001G034300--Sobic003G126300 Sobic001G312900 Sobic001G312900 Sobic001G034300--Sobic001G312900 Sobic004G004300 Sobic004G004300 Sobic001G034300--Sobic004G004300 Sobic003G036800 Sobic003G036800 Sobic001G034300--Sobic003G036800 Sobic002G134600 Sobic002G134600 Sobic001G034300--Sobic002G134600
Octagon: transcription factors


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