Gene annotation
Transcriptome id Sobic.006G185500.2,Sobic.006G185500.3,Sobic.006G185500.1,Sobic.006G185500.4
Synonym Sb06g025950
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
uncharacterized membrane protein, putative, expressed
UniProt C5YE54
Pfam PF03105 PF07690 PF07690 PF03105
Panther DB PTHR23510 PTHR23510:SF23 PTHR23510:SF23 PTHR23510
NCBI CDD KOG2325; Predicted transporter/transmembrane protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0016021integral component of membrane


Orthologs (automatic annotation)
TAIR AT4G22990 : Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein
RAP-DB (Rice) LOC_Os04g48390.1 : uncharacterized membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a056749 , Zm00025a010146
Brachypodium KQJ84130 , KQJ84129 , KQJ84128
Barley HORVU2Hr1G094690.23 , HORVU2Hr1G094690.22 , HORVU2Hr1G094690.21 , HORVU2Hr1G094690.20 , HORVU2Hr1G094690.24 , HORVU6Hr1G065710.24 , HORVU6Hr1G065710.25 , HORVU6Hr1G065710.26 , HORVU6Hr1G065710.27 , HORVU6Hr1G065710.20 , HORVU6Hr1G065710.21 , HORVU6Hr1G065710.22 , HORVU6Hr1G065710.23 , HORVU6Hr1G065710.28 , HORVU6Hr1G065710.29 , HORVU6Hr1G065710.19 , HORVU6Hr1G065710.18 , HORVU6Hr1G065710.11 , HORVU6Hr1G065710.13 , HORVU6Hr1G065710.12 , HORVU6Hr1G065710.15 , HORVU6Hr1G065710.14 , HORVU6Hr1G065710.17 , HORVU6Hr1G065710.10 , HORVU2Hr1G094690.12 , HORVU2Hr1G094690.13 , HORVU2Hr1G094690.10 , HORVU2Hr1G094690.11 , HORVU2Hr1G094690.16 , HORVU2Hr1G094690.17 , HORVU2Hr1G094690.14 , HORVU2Hr1G094690.15 , HORVU2Hr1G094690.18 , HORVU2Hr1G094690.19 , HORVU2Hr1G094690.8 , HORVU2Hr1G094690.9 , HORVU2Hr1G094690.1 , HORVU2Hr1G094690.2 , HORVU2Hr1G094690.3 , HORVU2Hr1G094690.4 , HORVU2Hr1G094690.7 , HORVU6Hr1G065710.9 , HORVU6Hr1G065710.8 , HORVU6Hr1G065710.5 , HORVU6Hr1G065710.4 , HORVU6Hr1G065710.7 , HORVU6Hr1G065710.6 , HORVU6Hr1G065710.1 , HORVU6Hr1G065710.3 , HORVU6Hr1G065710.2 , HORVU6Hr1G065710.16 , HORVU6Hr1G065710.30
Wheat TraesCS2B02G417200 , TraesCS2A02G399200 , TraesCS2D02G396700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G051600 universal stress protein domain containing protein, putative, expressed -
2 Sobic.001G425100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@LIM domain-containing protein, putative, expressed -
3 Sobic.003G101850 - -
4 Sobic.001G462500 natural resistance-associated macrophage protein, putative, expressed K12347: SLC11A1, natural resistance-associated macrophage protein 1
5 Sobic.006G214200 aminotransferase, putative, expressed K16871: 4-aminobutyrate---pyruvate transaminase
6 Sobic.004G351300 protein binding protein, putative, expressed -
7 Sobic.001G116400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@-(PubMedID : 26976818)@glutamine synthetase, catalytic domain containing protein, expressed K01915: glnA, glutamine synthetase
8 Sobic.006G000100 aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
9 Sobic.007G186200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@solute carrier family 35 member F1, putative, expressed K15287: solute carrier family 35, member F1/2
10 Sobic.004G329300 leucine aminopeptidase, chloroplast precursor, putative, expressed K01255: CARP, leucyl aminopeptidase
11 Sobic.001G350700 Positive regulator of ABA(PubMedID : 30367619)@CAMK_CAMK_like.19 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
12 Sobic.007G095600 Cf2/Cf5 disease resistance protein, putative, expressed -
13 Sobic.009G211400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
14 Sobic.009G243800 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
15 Sobic.009G136100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@auxin-induced protein 5NG4, putative, expressed -
16 Sobic.010G107000 phosphatidylinositol-4-phosphate 5-Kinase family protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
17 Sobic.003G302800 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
18 Sobic.010G218400 ATP synthase, putative, expressed K02145: ATPeV1A, V-type H+-transporting ATPase subunit A
19 Sobic.006G028900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
20 Sobic.006G125400 steroid nuclear receptor, ligand-binding, putative, expressed -


Gene co-expression network
sample Sobic006G185500 Sobic006G185500 Sobic003G051600 Sobic003G051600 Sobic006G185500--Sobic003G051600 Sobic001G425100 Sobic001G425100 Sobic006G185500--Sobic001G425100 Sobic003G101850 Sobic003G101850 Sobic006G185500--Sobic003G101850 Sobic001G462500 Sobic001G462500 Sobic006G185500--Sobic001G462500 Sobic006G214200 Sobic006G214200 Sobic006G185500--Sobic006G214200 Sobic004G351300 Sobic004G351300 Sobic006G185500--Sobic004G351300 Sobic001G116400 Sobic001G116400 Sobic006G185500--Sobic001G116400 Sobic006G000100 Sobic006G000100 Sobic006G185500--Sobic006G000100 Sobic007G186200 Sobic007G186200 Sobic006G185500--Sobic007G186200 Sobic007G210500 Sobic007G210500 Sobic003G051600--Sobic007G210500 Sobic002G266000 Sobic002G266000 Sobic003G051600--Sobic002G266000 Sobic001G282600 Sobic001G282600 Sobic003G051600--Sobic001G282600 Sobic003G051600--Sobic006G214200 Sobic006G064600 Sobic006G064600 Sobic003G051600--Sobic006G064600 Sobic003G320700 Sobic003G320700 Sobic003G051600--Sobic003G320700 Sobic006G233500 Sobic006G233500 Sobic003G051600--Sobic006G233500 Sobic003G051600--Sobic001G462500 Sobic001G409300 Sobic001G409300 Sobic003G051600--Sobic001G409300 Sobic006G000300 Sobic006G000300 Sobic001G425100--Sobic006G000300 Sobic001G425100--Sobic006G185500 Sobic010G199200 Sobic010G199200 Sobic001G425100--Sobic010G199200 Sobic001G425100--Sobic006G000100 Sobic008G189100 Sobic008G189100 Sobic001G425100--Sobic008G189100 Sobic002G148700 Sobic002G148700 Sobic001G425100--Sobic002G148700 Sobic007G167200 Sobic007G167200 Sobic001G425100--Sobic007G167200 Sobic001G173500 Sobic001G173500 Sobic001G425100--Sobic001G173500 Sobic004G329300 Sobic004G329300 Sobic001G425100--Sobic004G329300 Sobic006G271200 Sobic006G271200 Sobic003G101850--Sobic006G271200 Sobic006G204900 Sobic006G204900 Sobic003G101850--Sobic006G204900 Sobic003G101850--Sobic004G351300 Sobic001G436900 Sobic001G436900 Sobic003G101850--Sobic001G436900 Sobic001G217400 Sobic001G217400 Sobic003G101850--Sobic001G217400 Sobic010G072800 Sobic010G072800 Sobic003G101850--Sobic010G072800 Sobic009G211400 Sobic009G211400 Sobic003G101850--Sobic009G211400 Sobic010G107000 Sobic010G107000 Sobic003G101850--Sobic010G107000 Sobic009G193700 Sobic009G193700 Sobic003G101850--Sobic009G193700 Sobic001G462500--Sobic002G266000 Sobic001G462500--Sobic006G204900 Sobic003G322700 Sobic003G322700 Sobic001G462500--Sobic003G322700 Sobic004G265800 Sobic004G265800 Sobic001G462500--Sobic004G265800 Sobic001G016700 Sobic001G016700 Sobic001G462500--Sobic001G016700 Sobic007G004500 Sobic007G004500 Sobic001G462500--Sobic007G004500 Sobic004G266400 Sobic004G266400 Sobic001G462500--Sobic004G266400 Sobic006G087700 Sobic006G087700 Sobic001G462500--Sobic006G087700 Sobic001G207400 Sobic001G207400 Sobic001G462500--Sobic001G207400 Sobic003G257100 Sobic003G257100 Sobic006G214200--Sobic003G257100 Sobic009G029600 Sobic009G029600 Sobic006G214200--Sobic009G029600 Sobic006G214200--Sobic010G107000 Sobic008G153400 Sobic008G153400 Sobic006G214200--Sobic008G153400 Sobic003G355600 Sobic003G355600 Sobic006G214200--Sobic003G355600 Sobic006G214200--Sobic009G211400 Sobic006G199000 Sobic006G199000 Sobic006G214200--Sobic006G199000 Sobic006G214200--Sobic006G204900 Sobic003G138200 Sobic003G138200 Sobic006G214200--Sobic003G138200 Sobic005G059600 Sobic005G059600 Sobic004G351300--Sobic005G059600 Sobic004G016000 Sobic004G016000 Sobic004G351300--Sobic004G016000 Sobic006G237900 Sobic006G237900 Sobic004G351300--Sobic006G237900 Sobic004G351300--Sobic006G271200 Sobic004G351300--Sobic003G101850 Sobic004G351300--Sobic010G072800 Sobic006G126500 Sobic006G126500 Sobic004G351300--Sobic006G126500 Sobic001G003000 Sobic001G003000 Sobic004G351300--Sobic001G003000 Sobic003G089000 Sobic003G089000 Sobic004G351300--Sobic003G089000 Sobic001G116400--Sobic008G189100 Sobic001G116400--Sobic006G185500 Sobic006G157600 Sobic006G157600 Sobic001G116400--Sobic006G157600 Sobic008G190100 Sobic008G190100 Sobic001G116400--Sobic008G190100 Sobic006G145500 Sobic006G145500 Sobic001G116400--Sobic006G145500 Sobic010G218400 Sobic010G218400 Sobic001G116400--Sobic010G218400 Sobic001G293300 Sobic001G293300 Sobic001G116400--Sobic001G293300 Sobic002G121300 Sobic002G121300 Sobic001G116400--Sobic002G121300 Sobic004G314500 Sobic004G314500 Sobic001G116400--Sobic004G314500 Sobic006G000100--Sobic006G000300 Sobic008G003700 Sobic008G003700 Sobic006G000100--Sobic008G003700 Sobic006G000100--Sobic004G329300 Sobic006G002000 Sobic006G002000 Sobic006G000100--Sobic006G002000 Sobic004G296400 Sobic004G296400 Sobic006G000100--Sobic004G296400 Sobic003G242000 Sobic003G242000 Sobic006G000100--Sobic003G242000 Sobic010G072400 Sobic010G072400 Sobic006G000100--Sobic010G072400 Sobic006G000100--Sobic007G004500 Sobic010G220000 Sobic010G220000 Sobic006G000100--Sobic010G220000 Sobic001G325200 Sobic001G325200 Sobic007G186200--Sobic001G325200 Sobic002G304000 Sobic002G304000 Sobic007G186200--Sobic002G304000 Sobic009G226300 Sobic009G226300 Sobic007G186200--Sobic009G226300 Sobic001G015500 Sobic001G015500 Sobic007G186200--Sobic001G015500 Sobic007G068100 Sobic007G068100 Sobic007G186200--Sobic007G068100 Sobic007G186200--Sobic003G355600 Sobic001G150600 Sobic001G150600 Sobic007G186200--Sobic001G150600 Sobic004G101900 Sobic004G101900 Sobic007G186200--Sobic004G101900 Sobic009G054500 Sobic009G054500 Sobic007G186200--Sobic009G054500
Octagon: transcription factors


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