Gene annotation
Transcriptome id Sobic.006G011500.2,Sobic.006G011500.1
Synonym Sb06g001145
Functional annotation expressed protein
UniProt A0A1B6PJH5 , A0A1B6PJF8
Pfam -
Panther DB PTHR33137 PTHR33137:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G15780 : -
RAP-DB (Rice) LOC_Os04g03860.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G088824 - -
2 Sobic.006G147450 - -
3 Sobic.004G256700 ZAC, putative, expressed K12486: stromal membrane-associated protein
4 Sobic.003G129900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
5 Sobic.004G198800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@expressed protein K01113: alkaline phosphatase D
6 Sobic.001G387200 expressed protein -
7 Sobic.001G118300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@GLTP domain containing protein, putative, expressed -
8 Sobic.010G040900 trafficking protein particle complex subunit 4, putative, expressed -
9 Sobic.005G039900 expressed protein -
10 Sobic.005G019100 TRAF-type zinc finger family protein, expressed -
11 Sobic.003G276100 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
12 Sobic.003G377000 powdery mildew resistant protein 5, putative, expressed -
13 Sobic.003G308800 transmembrane protein 56, putative, expressed -
14 Sobic.004G093600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
15 Sobic.006G120900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
16 Sobic.003G139200 - -
17 Sobic.006G126000 26S proteasome non-ATPase regulatory subunit 6, putative, expressed K03037: PSMD6, 26S proteasome regulatory subunit N7
18 Sobic.003G355400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
19 Sobic.001G178500 chloroplast 30S ribosomal protein S19, putative, expressed K02965: RP-S19, small subunit ribosomal protein S19
20 Sobic.001G008100 expressed protein K17966: transmembrane protein 70, mitochondrial


Gene co-expression network
sample Sobic006G011500 Sobic006G011500 Sobic008G088824 Sobic008G088824 Sobic006G011500--Sobic008G088824 Sobic006G147450 Sobic006G147450 Sobic006G011500--Sobic006G147450 Sobic004G256700 Sobic004G256700 Sobic006G011500--Sobic004G256700 Sobic003G129900 Sobic003G129900 Sobic006G011500--Sobic003G129900 Sobic004G198800 Sobic004G198800 Sobic006G011500--Sobic004G198800 Sobic001G387200 Sobic001G387200 Sobic006G011500--Sobic001G387200 Sobic001G118300 Sobic001G118300 Sobic006G011500--Sobic001G118300 Sobic010G040900 Sobic010G040900 Sobic006G011500--Sobic010G040900 Sobic005G039900 Sobic005G039900 Sobic006G011500--Sobic005G039900 Sobic003G276100 Sobic003G276100 Sobic008G088824--Sobic003G276100 Sobic001G008100 Sobic001G008100 Sobic008G088824--Sobic001G008100 Sobic003G365100 Sobic003G365100 Sobic008G088824--Sobic003G365100 Sobic003G156400 Sobic003G156400 Sobic008G088824--Sobic003G156400 Sobic001G253300 Sobic001G253300 Sobic008G088824--Sobic001G253300 Sobic007G056100 Sobic007G056100 Sobic008G088824--Sobic007G056100 Sobic003G316200 Sobic003G316200 Sobic008G088824--Sobic003G316200 Sobic001G188400 Sobic001G188400 Sobic008G088824--Sobic001G188400 Sobic003G058500 Sobic003G058500 Sobic008G088824--Sobic003G058500 Sobic008G146000 Sobic008G146000 Sobic006G147450--Sobic008G146000 Sobic007G065800 Sobic007G065800 Sobic006G147450--Sobic007G065800 Sobic002G150100 Sobic002G150100 Sobic006G147450--Sobic002G150100 Sobic003G344050 Sobic003G344050 Sobic006G147450--Sobic003G344050 Sobic004G061701 Sobic004G061701 Sobic006G147450--Sobic004G061701 Sobic007G108200 Sobic007G108200 Sobic006G147450--Sobic007G108200 Sobic002G220800 Sobic002G220800 Sobic006G147450--Sobic002G220800 Sobic004G256700--Sobic003G129900 Sobic005G019100 Sobic005G019100 Sobic004G256700--Sobic005G019100 Sobic004G256700--Sobic001G387200 Sobic006G120900 Sobic006G120900 Sobic004G256700--Sobic006G120900 Sobic004G093600 Sobic004G093600 Sobic004G256700--Sobic004G093600 Sobic003G196600 Sobic003G196600 Sobic004G256700--Sobic003G196600 Sobic003G274200 Sobic003G274200 Sobic004G256700--Sobic003G274200 Sobic004G173700 Sobic004G173700 Sobic004G256700--Sobic004G173700 Sobic001G518500 Sobic001G518500 Sobic004G256700--Sobic001G518500 Sobic003G129900--Sobic001G387200 Sobic003G129900--Sobic004G093600 Sobic003G129900--Sobic006G120900 Sobic003G129900--Sobic005G019100 Sobic003G129900--Sobic004G173700 Sobic003G129900--Sobic004G256700 Sobic002G420600 Sobic002G420600 Sobic003G129900--Sobic002G420600 Sobic003G034900 Sobic003G034900 Sobic003G129900--Sobic003G034900 Sobic003G129900--Sobic001G518500 Sobic002G139600 Sobic002G139600 Sobic004G198800--Sobic002G139600 Sobic003G308800 Sobic003G308800 Sobic004G198800--Sobic003G308800 Sobic006G166400 Sobic006G166400 Sobic004G198800--Sobic006G166400 Sobic003G377000 Sobic003G377000 Sobic004G198800--Sobic003G377000 Sobic002G007800 Sobic002G007800 Sobic004G198800--Sobic002G007800 Sobic004G198800--Sobic004G256700 Sobic004G198800--Sobic001G387200 Sobic004G198800--Sobic006G120900 Sobic004G198800--Sobic003G129900 Sobic001G387200--Sobic003G129900 Sobic001G387200--Sobic004G093600 Sobic001G387200--Sobic006G120900 Sobic001G387200--Sobic004G173700 Sobic008G018300 Sobic008G018300 Sobic001G387200--Sobic008G018300 Sobic001G387200--Sobic004G256700 Sobic002G255400 Sobic002G255400 Sobic001G387200--Sobic002G255400 Sobic001G387200--Sobic002G420600 Sobic001G387200--Sobic005G019100 Sobic001G118300--Sobic005G019100 Sobic006G039600 Sobic006G039600 Sobic001G118300--Sobic006G039600 Sobic001G118300--Sobic004G256700 Sobic010G262300 Sobic010G262300 Sobic001G118300--Sobic010G262300 Sobic001G118300--Sobic003G196600 Sobic010G031000 Sobic010G031000 Sobic001G118300--Sobic010G031000 Sobic004G159400 Sobic004G159400 Sobic001G118300--Sobic004G159400 Sobic004G159000 Sobic004G159000 Sobic001G118300--Sobic004G159000 Sobic003G273000 Sobic003G273000 Sobic001G118300--Sobic003G273000 Sobic004G039400 Sobic004G039400 Sobic010G040900--Sobic004G039400 Sobic001G443200 Sobic001G443200 Sobic010G040900--Sobic001G443200 Sobic009G191400 Sobic009G191400 Sobic010G040900--Sobic009G191400 Sobic010G040900--Sobic001G008100 Sobic001G178500 Sobic001G178500 Sobic010G040900--Sobic001G178500 Sobic006G126000 Sobic006G126000 Sobic010G040900--Sobic006G126000 Sobic003G261800 Sobic003G261800 Sobic010G040900--Sobic003G261800 Sobic003G135600 Sobic003G135600 Sobic010G040900--Sobic003G135600 Sobic004G344800 Sobic004G344800 Sobic010G040900--Sobic004G344800 Sobic003G133100 Sobic003G133100 Sobic005G039900--Sobic003G133100 Sobic010G043250 Sobic010G043250 Sobic005G039900--Sobic010G043250 Sobic003G137600 Sobic003G137600 Sobic005G039900--Sobic003G137600 Sobic002G399400 Sobic002G399400 Sobic005G039900--Sobic002G399400 Sobic003G212000 Sobic003G212000 Sobic005G039900--Sobic003G212000 Sobic008G071300 Sobic008G071300 Sobic005G039900--Sobic008G071300 Sobic009G189700 Sobic009G189700 Sobic005G039900--Sobic009G189700 Sobic005G074300 Sobic005G074300 Sobic005G039900--Sobic005G074300 Sobic003G234500 Sobic003G234500 Sobic005G039900--Sobic003G234500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.