Gene annotation
Transcriptome id Sobic.003G355400.1
Synonym Sb03g039760
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
oxidoreductase, aldo/keto reductase family protein, putative, expressed
UniProt C5XPS3
Pfam PF00248
Panther DB PTHR11732 PTHR11732:SF222
NCBI CDD KOG1577; Aldo/keto reductase family proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37770 : NAD(P)-linked oxidoreductase superfamily protein
RAP-DB (Rice) LOC_Os01g62870.1 : oxidoreductase, aldo/keto reductase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a039656 , Zm00025a026863
Brachypodium KQK10565 , KQJ98515 , KQJ98514 , KQJ98513
Barley HORVU3Hr1G007410.9 , HORVU3Hr1G007410.8 , HORVU3Hr1G007410.3 , HORVU3Hr1G007410.2 , HORVU3Hr1G007410.7 , HORVU3Hr1G007410.6 , HORVU3Hr1G007410.5 , HORVU3Hr1G007410.4 , HORVU3Hr1G085780.10 , HORVU3Hr1G007410.18 , HORVU3Hr1G007410.13 , HORVU3Hr1G007410.11 , HORVU3Hr1G007410.10 , HORVU3Hr1G007410.17 , HORVU3Hr1G007410.16 , HORVU3Hr1G007410.15 , HORVU3Hr1G007410.14 , HORVU3Hr1G007410.20 , HORVU3Hr1G085780.5 , HORVU3Hr1G085780.4 , HORVU3Hr1G085780.7 , HORVU3Hr1G085780.6 , HORVU3Hr1G085780.1 , HORVU3Hr1G085780.3 , HORVU3Hr1G085780.2 , HORVU3Hr1G085780.9 , HORVU3Hr1G085780.8 , HORVU3Hr1G085780.32 , HORVU3Hr1G085780.26
Wheat TraesCS1A02G282400 , TraesCS3D02G356900 , TraesCS3B02G395600 , TraesCS3A02G038400 , TraesCS1D02G022400 , TraesCS3D02G041300 , TraesCS1B02G025100 , TraesCS1B02G025100 , TraesCS1B02G028300 , TraesCS3B02G045400 , TraesCS3A02G363400 , TraesCS1D02G281700 , TraesCS1D02G281700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G156500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytoplasmic membrane protein, putative, expressed -
2 Sobic.001G342900 ubiquinone biosynthesis protein COQ9, mitochondrial precursor, putative, expressed K18587: ubiquinone biosynthesis protein COQ9
3 Sobic.004G290100 glutathione peroxidase, putative, expressed -
4 Sobic.009G132800 methyl-binding domain protein MBD, putative, expressed -
5 Sobic.003G160500 thiamin pyrophosphokinase 1, putative, expressed K00949: thiN, TPK1, thiamine pyrophosphokinase
6 Sobic.006G212900 expressed protein K12606: RCD1, CNOT9, CCR4-NOT transcription complex subunit 9
7 Sobic.004G318200 expressed protein -
8 Sobic.006G011500 expressed protein -
9 Sobic.010G040900 trafficking protein particle complex subunit 4, putative, expressed -
10 Sobic.003G346500 similar to Nuclear transcription factor Y subunit B-3(PubMedID : 29862293)@tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed K08065: NFYB, nuclear transcription Y subunit beta
11 Sobic.005G102500 expressed protein -
12 Sobic.001G404900 ubiquitin-activating enzyme, putative, expressed K03178: UBE1, ubiquitin-activating enzyme E1
13 Sobic.001G038000 histidine acid phosphatase, putative, expressed K03103: multiple inositol-polyphosphate phosphatase / 2,3-bisphosphoglycerate 3-phosphatase
14 Sobic.003G200600 CBS domain containing membrane protein, putative, expressed -
15 Sobic.002G396700 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial precursor, putative, expressed K03942: NADH dehydrogenase (ubiquinone) flavoprotein 1
16 Sobic.001G399700 exonuclease, putative, expressed -
17 Sobic.001G313500 tobamovirus multiplication protein, putative, expressed -
18 Sobic.008G088824 - -
19 Sobic.008G118300 expressed protein -
20 Sobic.002G358400 eukaryotic peptide chain release factor subunit 1-1, putative, expressed K03265: ETF1, peptide chain release factor subunit 1


Gene co-expression network
sample Sobic003G355400 Sobic003G355400 Sobic009G156500 Sobic009G156500 Sobic003G355400--Sobic009G156500 Sobic001G342900 Sobic001G342900 Sobic003G355400--Sobic001G342900 Sobic004G290100 Sobic004G290100 Sobic003G355400--Sobic004G290100 Sobic009G132800 Sobic009G132800 Sobic003G355400--Sobic009G132800 Sobic003G160500 Sobic003G160500 Sobic003G355400--Sobic003G160500 Sobic006G212900 Sobic006G212900 Sobic003G355400--Sobic006G212900 Sobic004G318200 Sobic004G318200 Sobic003G355400--Sobic004G318200 Sobic006G011500 Sobic006G011500 Sobic003G355400--Sobic006G011500 Sobic010G040900 Sobic010G040900 Sobic003G355400--Sobic010G040900 Sobic003G261800 Sobic003G261800 Sobic009G156500--Sobic003G261800 Sobic009G191400 Sobic009G191400 Sobic009G156500--Sobic009G191400 Sobic007G023400 Sobic007G023400 Sobic009G156500--Sobic007G023400 Sobic002G396700 Sobic002G396700 Sobic009G156500--Sobic002G396700 Sobic010G032600 Sobic010G032600 Sobic009G156500--Sobic010G032600 Sobic009G156500--Sobic009G132800 Sobic001G073600 Sobic001G073600 Sobic009G156500--Sobic001G073600 Sobic006G276700 Sobic006G276700 Sobic009G156500--Sobic006G276700 Sobic004G347600 Sobic004G347600 Sobic009G156500--Sobic004G347600 Sobic006G250800 Sobic006G250800 Sobic001G342900--Sobic006G250800 Sobic009G116900 Sobic009G116900 Sobic001G342900--Sobic009G116900 Sobic001G404900 Sobic001G404900 Sobic001G342900--Sobic001G404900 Sobic001G342900--Sobic004G290100 Sobic002G306100 Sobic002G306100 Sobic001G342900--Sobic002G306100 Sobic003G193500 Sobic003G193500 Sobic001G342900--Sobic003G193500 Sobic009G128500 Sobic009G128500 Sobic001G342900--Sobic009G128500 Sobic007G087000 Sobic007G087000 Sobic001G342900--Sobic007G087000 Sobic003G235100 Sobic003G235100 Sobic001G342900--Sobic003G235100 Sobic004G290100--Sobic001G342900 Sobic002G054400 Sobic002G054400 Sobic004G290100--Sobic002G054400 Sobic004G290200 Sobic004G290200 Sobic004G290100--Sobic004G290200 Sobic001G125500 Sobic001G125500 Sobic004G290100--Sobic001G125500 Sobic005G045700 Sobic005G045700 Sobic004G290100--Sobic005G045700 Sobic007G122700 Sobic007G122700 Sobic004G290100--Sobic007G122700 Sobic003G427200 Sobic003G427200 Sobic004G290100--Sobic003G427200 Sobic008G046000 Sobic008G046000 Sobic004G290100--Sobic008G046000 Sobic002G383700 Sobic002G383700 Sobic004G290100--Sobic002G383700 Sobic004G054700 Sobic004G054700 Sobic009G132800--Sobic004G054700 Sobic009G216700 Sobic009G216700 Sobic009G132800--Sobic009G216700 Sobic001G008100 Sobic001G008100 Sobic009G132800--Sobic001G008100 Sobic007G012900 Sobic007G012900 Sobic009G132800--Sobic007G012900 Sobic006G219000 Sobic006G219000 Sobic009G132800--Sobic006G219000 Sobic004G141700 Sobic004G141700 Sobic009G132800--Sobic004G141700 Sobic004G256300 Sobic004G256300 Sobic009G132800--Sobic004G256300 Sobic001G538500 Sobic001G538500 Sobic009G132800--Sobic001G538500 Sobic002G401700 Sobic002G401700 Sobic009G132800--Sobic002G401700 Sobic003G058500 Sobic003G058500 Sobic003G160500--Sobic003G058500 Sobic002G023100 Sobic002G023100 Sobic003G160500--Sobic002G023100 Sobic003G305900 Sobic003G305900 Sobic003G160500--Sobic003G305900 Sobic001G399700 Sobic001G399700 Sobic003G160500--Sobic001G399700 Sobic001G501900 Sobic001G501900 Sobic003G160500--Sobic001G501900 Sobic001G378800 Sobic001G378800 Sobic003G160500--Sobic001G378800 Sobic006G232800 Sobic006G232800 Sobic003G160500--Sobic006G232800 Sobic010G160300 Sobic010G160300 Sobic003G160500--Sobic010G160300 Sobic010G181600 Sobic010G181600 Sobic003G160500--Sobic010G181600 Sobic003G023200 Sobic003G023200 Sobic006G212900--Sobic003G023200 Sobic004G247100 Sobic004G247100 Sobic006G212900--Sobic004G247100 Sobic006G212900--Sobic003G193500 Sobic009G195700 Sobic009G195700 Sobic006G212900--Sobic009G195700 Sobic006G212900--Sobic004G256300 Sobic003G129300 Sobic003G129300 Sobic006G212900--Sobic003G129300 Sobic008G116600 Sobic008G116600 Sobic006G212900--Sobic008G116600 Sobic003G222700 Sobic003G222700 Sobic006G212900--Sobic003G222700 Sobic001G467100 Sobic001G467100 Sobic006G212900--Sobic001G467100 Sobic003G428200 Sobic003G428200 Sobic004G318200--Sobic003G428200 Sobic003G126800 Sobic003G126800 Sobic004G318200--Sobic003G126800 Sobic007G004200 Sobic007G004200 Sobic004G318200--Sobic007G004200 Sobic004G297300 Sobic004G297300 Sobic004G318200--Sobic004G297300 Sobic003G043400 Sobic003G043400 Sobic004G318200--Sobic003G043400 Sobic009G117200 Sobic009G117200 Sobic004G318200--Sobic009G117200 Sobic003G252900 Sobic003G252900 Sobic004G318200--Sobic003G252900 Sobic004G335000 Sobic004G335000 Sobic004G318200--Sobic004G335000 Sobic005G102500 Sobic005G102500 Sobic004G318200--Sobic005G102500 Sobic008G088824 Sobic008G088824 Sobic006G011500--Sobic008G088824 Sobic006G147450 Sobic006G147450 Sobic006G011500--Sobic006G147450 Sobic004G256700 Sobic004G256700 Sobic006G011500--Sobic004G256700 Sobic003G129900 Sobic003G129900 Sobic006G011500--Sobic003G129900 Sobic004G198800 Sobic004G198800 Sobic006G011500--Sobic004G198800 Sobic001G387200 Sobic001G387200 Sobic006G011500--Sobic001G387200 Sobic001G118300 Sobic001G118300 Sobic006G011500--Sobic001G118300 Sobic006G011500--Sobic010G040900 Sobic005G039900 Sobic005G039900 Sobic006G011500--Sobic005G039900 Sobic004G039400 Sobic004G039400 Sobic010G040900--Sobic004G039400 Sobic001G443200 Sobic001G443200 Sobic010G040900--Sobic001G443200 Sobic010G040900--Sobic009G191400 Sobic010G040900--Sobic001G008100 Sobic001G178500 Sobic001G178500 Sobic010G040900--Sobic001G178500 Sobic006G126000 Sobic006G126000 Sobic010G040900--Sobic006G126000 Sobic010G040900--Sobic003G261800 Sobic003G135600 Sobic003G135600 Sobic010G040900--Sobic003G135600 Sobic004G344800 Sobic004G344800 Sobic010G040900--Sobic004G344800
Octagon: transcription factors


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