Gene annotation
Transcriptome id Sobic.006G096800.3,Sobic.006G096800.2
Synonym Sb06g018150
Functional annotation expressed protein
UniProt A0A1Z5RDT6 , A0A1Z5RD48
Pfam PF07800
Panther DB PTHR31197 PTHR31197:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G68140 : Protein of unknown function (DUF1644)
RAP-DB (Rice) LOC_Os04g37530.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G096800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G342500 methyltransferase, putative, expressed -
2 Sobic.002G151500 R-interacting factor 1, putative, expressed -
3 Sobic.006G156400 double-stranded RNA binding motif containing protein, expressed K18998: RNA polymerase II C-terminal domain phosphatase-like 1/2
4 Sobic.004G298600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
5 Sobic.005G048600 expressed protein -
6 Sobic.009G201000 hydrolase, acting on carbon-nitrogen, putative, expressed -
7 Sobic.010G057600 expressed protein -
8 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
9 Sobic.001G073700 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
10 Sobic.003G435400 OsDegp14 - Putative Deg protease homologue, expressed -
11 Sobic.006G189000 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
12 Sobic.005G045800 serine/threonine-protein kinase WNK4, putative, expressed K08867: WNK, WNK lysine deficient protein kinase
13 Sobic.004G355750 - -
14 Sobic.007G086600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
15 Sobic.007G144100 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C
16 Sobic.004G051600 EMB2758, putative, expressed -
17 Sobic.005G209600 kinesin-4, putative, expressed K10406: kinesin family member C2/C3
18 Sobic.009G064200 boron transporter protein, putative, expressed -
19 Sobic.001G433600 - -
20 Sobic.007G189100 SFC, putative, expressed K12489: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein


Gene co-expression network
sample Sobic006G096800 Sobic006G096800 Sobic003G342500 Sobic003G342500 Sobic006G096800--Sobic003G342500 Sobic002G151500 Sobic002G151500 Sobic006G096800--Sobic002G151500 Sobic006G156400 Sobic006G156400 Sobic006G096800--Sobic006G156400 Sobic004G298600 Sobic004G298600 Sobic006G096800--Sobic004G298600 Sobic005G048600 Sobic005G048600 Sobic006G096800--Sobic005G048600 Sobic009G201000 Sobic009G201000 Sobic006G096800--Sobic009G201000 Sobic010G057600 Sobic010G057600 Sobic006G096800--Sobic010G057600 Sobic003G352900 Sobic003G352900 Sobic006G096800--Sobic003G352900 Sobic001G073700 Sobic001G073700 Sobic006G096800--Sobic001G073700 Sobic003G342500--Sobic009G201000 Sobic003G342500--Sobic003G352900 Sobic003G342500--Sobic001G073700 Sobic006G116900 Sobic006G116900 Sobic003G342500--Sobic006G116900 Sobic003G342500--Sobic006G156400 Sobic006G265800 Sobic006G265800 Sobic003G342500--Sobic006G265800 Sobic001G308500 Sobic001G308500 Sobic003G342500--Sobic001G308500 Sobic001G076600 Sobic001G076600 Sobic003G342500--Sobic001G076600 Sobic002G108100 Sobic002G108100 Sobic003G342500--Sobic002G108100 Sobic001G131900 Sobic001G131900 Sobic002G151500--Sobic001G131900 Sobic004G313400 Sobic004G313400 Sobic002G151500--Sobic004G313400 Sobic010G009700 Sobic010G009700 Sobic002G151500--Sobic010G009700 Sobic003G377300 Sobic003G377300 Sobic002G151500--Sobic003G377300 Sobic002G151500--Sobic003G352900 Sobic007G144100 Sobic007G144100 Sobic002G151500--Sobic007G144100 Sobic003G258100 Sobic003G258100 Sobic002G151500--Sobic003G258100 Sobic005G045800 Sobic005G045800 Sobic002G151500--Sobic005G045800 Sobic002G151500--Sobic004G298600 Sobic006G156400--Sobic009G201000 Sobic008G141100 Sobic008G141100 Sobic006G156400--Sobic008G141100 Sobic009G178400 Sobic009G178400 Sobic006G156400--Sobic009G178400 Sobic009G121200 Sobic009G121200 Sobic006G156400--Sobic009G121200 Sobic009G202000 Sobic009G202000 Sobic006G156400--Sobic009G202000 Sobic005G048500 Sobic005G048500 Sobic006G156400--Sobic005G048500 Sobic001G387300 Sobic001G387300 Sobic006G156400--Sobic001G387300 Sobic006G156400--Sobic001G073700 Sobic009G113500 Sobic009G113500 Sobic006G156400--Sobic009G113500 Sobic001G385300 Sobic001G385300 Sobic004G298600--Sobic001G385300 Sobic004G298600--Sobic001G131900 Sobic003G293400 Sobic003G293400 Sobic004G298600--Sobic003G293400 Sobic004G026600 Sobic004G026600 Sobic004G298600--Sobic004G026600 Sobic005G060100 Sobic005G060100 Sobic004G298600--Sobic005G060100 Sobic004G298600--Sobic001G308500 Sobic001G433600 Sobic001G433600 Sobic004G298600--Sobic001G433600 Sobic007G105700 Sobic007G105700 Sobic004G298600--Sobic007G105700 Sobic004G298600--Sobic003G352900 Sobic007G086600 Sobic007G086600 Sobic005G048600--Sobic007G086600 Sobic005G048600--Sobic003G352900 Sobic005G048600--Sobic001G073700 Sobic005G048600--Sobic003G293400 Sobic005G048600--Sobic001G076600 Sobic003G217800 Sobic003G217800 Sobic005G048600--Sobic003G217800 Sobic005G048600--Sobic007G144100 Sobic005G048600--Sobic005G060100 Sobic005G048600--Sobic005G045800 Sobic009G201000--Sobic003G352900 Sobic008G166100 Sobic008G166100 Sobic009G201000--Sobic008G166100 Sobic001G384200 Sobic001G384200 Sobic009G201000--Sobic001G384200 Sobic002G362500 Sobic002G362500 Sobic009G201000--Sobic002G362500 Sobic001G072000 Sobic001G072000 Sobic009G201000--Sobic001G072000 Sobic009G201000--Sobic006G265800 Sobic001G322400 Sobic001G322400 Sobic009G201000--Sobic001G322400 Sobic007G039200 Sobic007G039200 Sobic009G201000--Sobic007G039200 Sobic009G201000--Sobic006G156400 Sobic003G048400 Sobic003G048400 Sobic010G057600--Sobic003G048400 Sobic009G180600 Sobic009G180600 Sobic010G057600--Sobic009G180600 Sobic001G207900 Sobic001G207900 Sobic010G057600--Sobic001G207900 Sobic003G379000 Sobic003G379000 Sobic010G057600--Sobic003G379000 Sobic004G355750 Sobic004G355750 Sobic010G057600--Sobic004G355750 Sobic001G442400 Sobic001G442400 Sobic010G057600--Sobic001G442400 Sobic004G336800 Sobic004G336800 Sobic010G057600--Sobic004G336800 Sobic004G014500 Sobic004G014500 Sobic010G057600--Sobic004G014500 Sobic005G181500 Sobic005G181500 Sobic010G057600--Sobic005G181500 Sobic003G352900--Sobic007G144100 Sobic002G299500 Sobic002G299500 Sobic003G352900--Sobic002G299500 Sobic003G352900--Sobic001G076600 Sobic003G376900 Sobic003G376900 Sobic003G352900--Sobic003G376900 Sobic003G352900--Sobic009G201000 Sobic003G352900--Sobic005G045800 Sobic009G163100 Sobic009G163100 Sobic003G352900--Sobic009G163100 Sobic003G352900--Sobic001G385300 Sobic008G007600 Sobic008G007600 Sobic003G352900--Sobic008G007600 Sobic001G073700--Sobic009G201000 Sobic001G073700--Sobic002G362500 Sobic001G073700--Sobic006G156400 Sobic001G073700--Sobic001G322400 Sobic006G050100 Sobic006G050100 Sobic001G073700--Sobic006G050100 Sobic001G073700--Sobic003G352900 Sobic001G073700--Sobic008G166100 Sobic001G073700--Sobic001G072000 Sobic001G073700--Sobic008G141100
Octagon: transcription factors


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