Gene annotation
Transcriptome id Sobic.006G146800.1
Synonym ckl8, Sb06g022560
Functional annotation CK1_CaseinKinase_1.7 - CK1 includes the casein kinase 1 kinases, expressed
UniProt A0A1B6PM22
Pfam PF00069
Panther DB PTHR11909 PTHR11909:SF114
NCBI CDD -
KEGG Orthology K08960; casein kinase 1, epsilon
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G14340 : casein kinase I
RAP-DB (Rice) LOC_Os04g43490.1 : CK1_CaseinKinase_1.7 - CK1 includes the casein kinase 1 kinases, expressed
MaizeGDB (Corn) Zm00025a049629 , Zm00025a056504 , Zm00025a035736 , Zm00025a017170 , Zm00025a010694
Brachypodium KQJ97082 , KQJ97083 , KQJ97080 , KQJ97081 , KQK00394 , KQK01276
Barley HORVU6Hr1G058230.10 , HORVU6Hr1G058230.11 , HORVU6Hr1G058230.12 , HORVU6Hr1G058230.13 , HORVU6Hr1G058230.6 , HORVU6Hr1G058230.7 , HORVU6Hr1G058230.4 , HORVU6Hr1G058230.5 , HORVU6Hr1G058230.2 , HORVU6Hr1G058230.3 , HORVU6Hr1G058230.1 , HORVU6Hr1G058230.8 , HORVU6Hr1G058230.9
Wheat TraesCS6A02G225600
Populus PNT25100 , PNT06718 , PNT06719 , PNT06716 , PNT06717 , PNT15174 , PNT06721 , PNT06720 , PNT15172 , PNT25098 , PNT15173 , PNT25099


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cDNA sequences
Sobic.006G146800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G102700 metalloendopeptidase/ metallopeptidase/ zinc ion binding protein, putative, expressed K01404: leishmanolysin
2 Sobic.003G126600 rab GDP dissociation inhibitor alpha, putative, expressed -
3 Sobic.001G518400 EF hand family protein, putative, expressed -
4 Sobic.003G314700 expressed protein -
5 Sobic.005G025800 dual specificity protein phosphatase, putative, expressed K14819: DUSP12, dual specificity phosphatase 12
6 Sobic.009G229600 tRNA-binding arm, putative, expressed -
7 Sobic.001G485800 nitrilase, putative, expressed K13566: NIT2, omega-amidase
8 Sobic.009G214900 expressed protein -
9 Sobic.001G322000 pollen ankyrin, putative, expressed K19044: E3 ubiquitin-protein ligase XBAT32/33
10 Sobic.010G017800 LMBR1 integral membrane protein, putative, expressed K14617: LMBR1 domain-containing protein 1
11 Sobic.006G073200 OTU-like cysteine protease family protein, putative, expressed K12655: OTUD5, OTU domain-containing protein 5
12 Sobic.003G240700 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed -
13 Sobic.001G078100 expressed protein -
14 Sobic.001G051700 expressed protein -
15 Sobic.007G027700 expressed protein -
16 Sobic.009G049400 "SRS3(Ortholog in rice:Kitagawa et al., 2010)"(PubMedID : 31659920)@ATKINESIN-13A/KINESIN-13A, putative, expressed K10393: KIF2_24, kinesin family member 2/24
17 Sobic.008G092300 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
18 Sobic.003G099300 expressed protein K18749: LSM14, RAP55, protein LSM14
19 Sobic.005G216300 RNA recognition motif containing protein, expressed K12837: splicing factor U2AF 65 kDa subunit
20 Sobic.010G275500 EF hand family protein, putative, expressed -


Gene co-expression network
sample Sobic006G146800 Sobic006G146800 Sobic001G102700 Sobic001G102700 Sobic006G146800--Sobic001G102700 Sobic003G126600 Sobic003G126600 Sobic006G146800--Sobic003G126600 Sobic001G518400 Sobic001G518400 Sobic006G146800--Sobic001G518400 Sobic003G314700 Sobic003G314700 Sobic006G146800--Sobic003G314700 Sobic005G025800 Sobic005G025800 Sobic006G146800--Sobic005G025800 Sobic009G229600 Sobic009G229600 Sobic006G146800--Sobic009G229600 Sobic001G485800 Sobic001G485800 Sobic006G146800--Sobic001G485800 Sobic009G214900 Sobic009G214900 Sobic006G146800--Sobic009G214900 Sobic001G322000 Sobic001G322000 Sobic006G146800--Sobic001G322000 Sobic001G026500 Sobic001G026500 Sobic001G102700--Sobic001G026500 Sobic001G111600 Sobic001G111600 Sobic001G102700--Sobic001G111600 Sobic001G362200 Sobic001G362200 Sobic001G102700--Sobic001G362200 Sobic002G313400 Sobic002G313400 Sobic001G102700--Sobic002G313400 Sobic010G275500 Sobic010G275500 Sobic001G102700--Sobic010G275500 Sobic008G118200 Sobic008G118200 Sobic001G102700--Sobic008G118200 Sobic001G094900 Sobic001G094900 Sobic001G102700--Sobic001G094900 Sobic005G220000 Sobic005G220000 Sobic001G102700--Sobic005G220000 Sobic005G128400 Sobic005G128400 Sobic001G102700--Sobic005G128400 Sobic004G039600 Sobic004G039600 Sobic003G126600--Sobic004G039600 Sobic003G249600 Sobic003G249600 Sobic003G126600--Sobic003G249600 Sobic003G126600--Sobic009G229600 Sobic003G187500 Sobic003G187500 Sobic003G126600--Sobic003G187500 Sobic010G053800 Sobic010G053800 Sobic003G126600--Sobic010G053800 Sobic003G126600--Sobic001G518400 Sobic001G369000 Sobic001G369000 Sobic003G126600--Sobic001G369000 Sobic003G187200 Sobic003G187200 Sobic003G126600--Sobic003G187200 Sobic004G072100 Sobic004G072100 Sobic003G126600--Sobic004G072100 Sobic001G170100 Sobic001G170100 Sobic001G518400--Sobic001G170100 Sobic006G138000 Sobic006G138000 Sobic001G518400--Sobic006G138000 Sobic001G335900 Sobic001G335900 Sobic001G518400--Sobic001G335900 Sobic001G078100 Sobic001G078100 Sobic001G518400--Sobic001G078100 Sobic001G518400--Sobic009G229600 Sobic001G518400--Sobic010G275500 Sobic006G202200 Sobic006G202200 Sobic001G518400--Sobic006G202200 Sobic001G518400--Sobic003G126600 Sobic001G518400--Sobic001G369000 Sobic003G029600 Sobic003G029600 Sobic003G314700--Sobic003G029600 Sobic008G124800 Sobic008G124800 Sobic003G314700--Sobic008G124800 Sobic001G437400 Sobic001G437400 Sobic003G314700--Sobic001G437400 Sobic003G240700 Sobic003G240700 Sobic003G314700--Sobic003G240700 Sobic003G405500 Sobic003G405500 Sobic003G314700--Sobic003G405500 Sobic007G019300 Sobic007G019300 Sobic003G314700--Sobic007G019300 Sobic004G204100 Sobic004G204100 Sobic003G314700--Sobic004G204100 Sobic001G426600 Sobic001G426600 Sobic003G314700--Sobic001G426600 Sobic002G412700 Sobic002G412700 Sobic003G314700--Sobic002G412700 Sobic007G027700 Sobic007G027700 Sobic005G025800--Sobic007G027700 Sobic001G226000 Sobic001G226000 Sobic005G025800--Sobic001G226000 Sobic009G001100 Sobic009G001100 Sobic005G025800--Sobic009G001100 Sobic003G253400 Sobic003G253400 Sobic005G025800--Sobic003G253400 Sobic007G119900 Sobic007G119900 Sobic005G025800--Sobic007G119900 Sobic004G133700 Sobic004G133700 Sobic005G025800--Sobic004G133700 Sobic007G191700 Sobic007G191700 Sobic005G025800--Sobic007G191700 Sobic001G469800 Sobic001G469800 Sobic005G025800--Sobic001G469800 Sobic006G267300 Sobic006G267300 Sobic005G025800--Sobic006G267300 Sobic009G049400 Sobic009G049400 Sobic009G229600--Sobic009G049400 Sobic009G229600--Sobic001G369000 Sobic009G229600--Sobic001G335900 Sobic003G427600 Sobic003G427600 Sobic009G229600--Sobic003G427600 Sobic003G270600 Sobic003G270600 Sobic009G229600--Sobic003G270600 Sobic009G229600--Sobic006G202200 Sobic009G229600--Sobic001G518400 Sobic009G229600--Sobic004G039600 Sobic007G120500 Sobic007G120500 Sobic009G229600--Sobic007G120500 Sobic010G106900 Sobic010G106900 Sobic001G485800--Sobic010G106900 Sobic001G485800--Sobic006G146800 Sobic001G023000 Sobic001G023000 Sobic001G485800--Sobic001G023000 Sobic001G485800--Sobic001G322000 Sobic001G485800--Sobic004G133700 Sobic003G196900 Sobic003G196900 Sobic001G485800--Sobic003G196900 Sobic006G248400 Sobic006G248400 Sobic001G485800--Sobic006G248400 Sobic001G096300 Sobic001G096300 Sobic001G485800--Sobic001G096300 Sobic001G485800--Sobic008G118200 Sobic009G214900--Sobic006G202200 Sobic009G214900--Sobic009G049400 Sobic009G214900--Sobic009G229600 Sobic009G214900--Sobic003G187200 Sobic007G125000 Sobic007G125000 Sobic009G214900--Sobic007G125000 Sobic006G163800 Sobic006G163800 Sobic009G214900--Sobic006G163800 Sobic009G126600 Sobic009G126600 Sobic009G214900--Sobic009G126600 Sobic010G185400 Sobic010G185400 Sobic009G214900--Sobic010G185400 Sobic009G170400 Sobic009G170400 Sobic009G214900--Sobic009G170400 Sobic002G408800 Sobic002G408800 Sobic001G322000--Sobic002G408800 Sobic003G400100 Sobic003G400100 Sobic001G322000--Sobic003G400100 Sobic002G342500 Sobic002G342500 Sobic001G322000--Sobic002G342500 Sobic001G261456 Sobic001G261456 Sobic001G322000--Sobic001G261456 Sobic001G322000--Sobic009G214900 Sobic001G322000--Sobic003G126600 SobicK004100 SobicK004100 Sobic001G322000--SobicK004100 Sobic004G057100 Sobic004G057100 Sobic001G322000--Sobic004G057100 Sobic007G203500 Sobic007G203500 Sobic001G322000--Sobic007G203500
Octagon: transcription factors


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