Gene annotation
Transcriptome id Sobic.006G166100.1
Synonym GATA26, Sb06g024200
Functional annotation GATA zinc finger domain containing protein, expressed
UniProt A0A1B6PMC8
Pfam PF13919 PF00320
Panther DB PTHR10071 PTHR10071:SF159
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0006355regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G17570 : GATA transcription factor 26
RAP-DB (Rice) LOC_Os04g46020.1 : GATA zinc finger domain containing protein, expressed
MaizeGDB (Corn) Zm00025a010374 , Zm00025a056653
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G375100 AAA-type ATPase family protein, putative, expressed -
2 Sobic.002G128200 Regulator of chromosome condensation (RCC1) family protein(PubMedID : 26465154)@Regulator of chromosome condensation domain containing protein, expressed -
3 Sobic.003G301900 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
4 Sobic.010G099700 peptide transporter PTR2, putative, expressed -
5 Sobic.002G305000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@small G protein family protein, putative, expressed -
6 Sobic.009G135000 Highest expression level in leave(PubMedID : 27501690)@OsSPL9 - SBP-box gene family member, expressed -
7 Sobic.007G201500 rabGAP/TBC domain-containing protein, putative, expressed K18469: TBC1 domain family member 5
8 Sobic.010G074300 smr domain containing protein, expressed -
9 Sobic.007G190000 expressed protein -
10 Sobic.010G205100 Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
11 Sobic.006G240400 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.003G190400 rossmann fold nucleotide-binding protein involved in DNA uptake, putative, expressed -
13 Sobic.006G219600 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
14 Sobic.006G214300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Putative leucine-rich repeatcontaining protein DDB_G0290503(PubMedID : 31721651)@- -
15 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.006G002300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.001G517800 NIN, putative, expressed -
18 Sobic.002G190300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
19 Sobic.002G187700 expressed protein -
20 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3


Gene co-expression network
sample Sobic006G166100 Sobic006G166100 Sobic001G375100 Sobic001G375100 Sobic006G166100--Sobic001G375100 Sobic002G128200 Sobic002G128200 Sobic006G166100--Sobic002G128200 Sobic003G301900 Sobic003G301900 Sobic006G166100--Sobic003G301900 Sobic010G099700 Sobic010G099700 Sobic006G166100--Sobic010G099700 Sobic002G305000 Sobic002G305000 Sobic006G166100--Sobic002G305000 Sobic009G135000 Sobic009G135000 Sobic006G166100--Sobic009G135000 Sobic007G201500 Sobic007G201500 Sobic006G166100--Sobic007G201500 Sobic010G074300 Sobic010G074300 Sobic006G166100--Sobic010G074300 Sobic007G190000 Sobic007G190000 Sobic006G166100--Sobic007G190000 Sobic003G155100 Sobic003G155100 Sobic001G375100--Sobic003G155100 Sobic008G001200 Sobic008G001200 Sobic001G375100--Sobic008G001200 Sobic005G149200 Sobic005G149200 Sobic001G375100--Sobic005G149200 Sobic003G247500 Sobic003G247500 Sobic001G375100--Sobic003G247500 Sobic001G454500 Sobic001G454500 Sobic001G375100--Sobic001G454500 Sobic010G010700 Sobic010G010700 Sobic001G375100--Sobic010G010700 Sobic002G008900 Sobic002G008900 Sobic001G375100--Sobic002G008900 Sobic007G198300 Sobic007G198300 Sobic001G375100--Sobic007G198300 Sobic005G001000 Sobic005G001000 Sobic001G375100--Sobic005G001000 Sobic005G149700 Sobic005G149700 Sobic002G128200--Sobic005G149700 Sobic006G104600 Sobic006G104600 Sobic002G128200--Sobic006G104600 Sobic006G002300 Sobic006G002300 Sobic002G128200--Sobic006G002300 Sobic006G087700 Sobic006G087700 Sobic002G128200--Sobic006G087700 Sobic004G179300 Sobic004G179300 Sobic002G128200--Sobic004G179300 Sobic002G128200--Sobic003G301900 Sobic009G011600 Sobic009G011600 Sobic002G128200--Sobic009G011600 Sobic001G517800 Sobic001G517800 Sobic002G128200--Sobic001G517800 Sobic002G128200--Sobic001G375100 Sobic002G146300 Sobic002G146300 Sobic003G301900--Sobic002G146300 Sobic003G301900--Sobic001G517800 Sobic010G139600 Sobic010G139600 Sobic003G301900--Sobic010G139600 Sobic003G190400 Sobic003G190400 Sobic003G301900--Sobic003G190400 Sobic003G301900--Sobic005G149200 Sobic003G320700 Sobic003G320700 Sobic003G301900--Sobic003G320700 Sobic006G219600 Sobic006G219600 Sobic003G301900--Sobic006G219600 Sobic003G301900--Sobic006G087700 Sobic003G301900--Sobic007G190000 Sobic009G038900 Sobic009G038900 Sobic010G099700--Sobic009G038900 Sobic004G356400 Sobic004G356400 Sobic010G099700--Sobic004G356400 Sobic008G094000 Sobic008G094000 Sobic010G099700--Sobic008G094000 Sobic002G056500 Sobic002G056500 Sobic010G099700--Sobic002G056500 Sobic004G169000 Sobic004G169000 Sobic010G099700--Sobic004G169000 Sobic003G343500 Sobic003G343500 Sobic010G099700--Sobic003G343500 Sobic005G101200 Sobic005G101200 Sobic010G099700--Sobic005G101200 Sobic001G333800 Sobic001G333800 Sobic010G099700--Sobic001G333800 Sobic006G133900 Sobic006G133900 Sobic010G099700--Sobic006G133900 Sobic002G359400 Sobic002G359400 Sobic002G305000--Sobic002G359400 Sobic009G201300 Sobic009G201300 Sobic002G305000--Sobic009G201300 Sobic003G354600 Sobic003G354600 Sobic002G305000--Sobic003G354600 Sobic010G147100 Sobic010G147100 Sobic002G305000--Sobic010G147100 Sobic001G355800 Sobic001G355800 Sobic002G305000--Sobic001G355800 Sobic006G175800 Sobic006G175800 Sobic002G305000--Sobic006G175800 Sobic001G303100 Sobic001G303100 Sobic002G305000--Sobic001G303100 Sobic002G305000--Sobic010G074300 Sobic003G220800 Sobic003G220800 Sobic002G305000--Sobic003G220800 Sobic009G135000--Sobic006G219600 Sobic009G135000--Sobic003G155100 Sobic004G042200 Sobic004G042200 Sobic009G135000--Sobic004G042200 Sobic010G125500 Sobic010G125500 Sobic009G135000--Sobic010G125500 Sobic009G135000--Sobic007G198300 Sobic009G135000--Sobic001G375100 Sobic006G259800 Sobic006G259800 Sobic009G135000--Sobic006G259800 Sobic009G135000--Sobic009G038900 Sobic009G135000--Sobic009G201300 Sobic001G073500 Sobic001G073500 Sobic007G201500--Sobic001G073500 Sobic006G222600 Sobic006G222600 Sobic007G201500--Sobic006G222600 Sobic010G210500 Sobic010G210500 Sobic007G201500--Sobic010G210500 Sobic007G201500--Sobic001G375100 Sobic010G205100 Sobic010G205100 Sobic007G201500--Sobic010G205100 Sobic007G201500--Sobic002G305000 Sobic010G176200 Sobic010G176200 Sobic007G201500--Sobic010G176200 Sobic007G201500--Sobic003G354600 Sobic008G130000 Sobic008G130000 Sobic007G201500--Sobic008G130000 Sobic010G074300--Sobic010G147100 Sobic004G118200 Sobic004G118200 Sobic010G074300--Sobic004G118200 Sobic010G074300--Sobic007G190000 Sobic001G080700 Sobic001G080700 Sobic010G074300--Sobic001G080700 Sobic002G311100 Sobic002G311100 Sobic010G074300--Sobic002G311100 Sobic010G131900 Sobic010G131900 Sobic010G074300--Sobic010G131900 Sobic009G074400 Sobic009G074400 Sobic010G074300--Sobic009G074400 Sobic003G316500 Sobic003G316500 Sobic010G074300--Sobic003G316500 Sobic001G268200 Sobic001G268200 Sobic010G074300--Sobic001G268200 Sobic007G190000--Sobic010G074300 Sobic007G190000--Sobic004G179300 Sobic003G372500 Sobic003G372500 Sobic007G190000--Sobic003G372500 Sobic010G227100 Sobic010G227100 Sobic007G190000--Sobic010G227100 Sobic007G190000--Sobic002G146300 Sobic010G020800 Sobic010G020800 Sobic007G190000--Sobic010G020800 Sobic007G190000--Sobic009G074400 Sobic007G190000--Sobic010G147100 Sobic004G189200 Sobic004G189200 Sobic007G190000--Sobic004G189200
Octagon: transcription factors


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