Gene annotation
Transcriptome id Sobic.006G179100.1
Synonym LAZ1, Sb06g025370
Functional annotation transmembrane protein, putative, expressed
UniProt C5YDZ7
Pfam PF03619
Panther DB PTHR23423 PTHR23423:SF30
NCBI CDD KOG2641; Predicted seven transmembrane receptor - rhodopsin family
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G38360 : Protein of unknown function (DUF300)
RAP-DB (Rice) LOC_Os02g44910.1 : transmembrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a010205
Brachypodium KQJ84055
Barley HORVU2Hr1G096080.9 , HORVU2Hr1G096080.8 , HORVU2Hr1G096080.3 , HORVU2Hr1G096080.2 , HORVU2Hr1G096080.1 , HORVU2Hr1G096080.7 , HORVU2Hr1G096080.6 , HORVU2Hr1G096080.5 , HORVU2Hr1G096080.4 , HORVU2Hr1G096080.13 , HORVU2Hr1G096080.12 , HORVU2Hr1G096080.11 , HORVU2Hr1G096080.10
Wheat TraesCS2B02G422900 , TraesCS2B02G422900 , TraesCS2B02G422900 , TraesCS2A02G404900 , TraesCS2A02G404900 , TraesCS2D02G401800 , TraesCS2D02G401800 , TraesCS2D02G401800
Populus -


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cDNA sequences
Sobic.006G179100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G079000 expressed protein -
2 Sobic.010G213500 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
3 Sobic.007G087000 aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
4 Sobic.010G169900 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
5 Sobic.010G244900 auxin efflux carrier, putative, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
6 Sobic.004G320700 CCR4-NOT transcription factor, putative, expressed K12605: CNOT2, CCR4-NOT transcription complex subunit 2
7 Sobic.002G292900 protein binding protein, putative, expressed -
8 Sobic.006G128100 lipase, putative, expressed -
9 Sobic.002G306100 ubiquinol-cytochrome C chaperone family protein, putative, expressed K17662: CBP3, cytochrome b pre-mRNA-processing protein 3
10 Sobic.001G237600 transcription factor Dp, putative, expressed K04683: transcription factor Dp-1
11 Sobic.003G202600 single myb histone, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.008G176000 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
13 Sobic.009G002800 STIP1 homology and U box-containing protein 1, putative, expressed K09561: STUB1, STIP1 homology and U-box containing protein 1
14 Sobic.004G252900 transcription factor IIA large subunit, putative, expressed K03122: TFIIA1, GTF2A1, transcription initiation factor TFIIA large subunit
15 Sobic.003G241700 SET domain containing protein, expressed -
16 Sobic.002G355800 calcium-binding protein, putative, expressed K08272: CAB39, calcium binding protein 39
17 Sobic.010G226000 expressed protein -
18 Sobic.003G189600 M16 domain containing zinc peptidase, putative, expressed -
19 Sobic.009G166600 nucleoside-triphosphatase, putative, expressed -
20 Sobic.003G316200 transmembrane protein 49, putative, expressed -


Gene co-expression network
sample Sobic006G179100 Sobic006G179100 Sobic002G079000 Sobic002G079000 Sobic006G179100--Sobic002G079000 Sobic010G213500 Sobic010G213500 Sobic006G179100--Sobic010G213500 Sobic007G087000 Sobic007G087000 Sobic006G179100--Sobic007G087000 Sobic010G169900 Sobic010G169900 Sobic006G179100--Sobic010G169900 Sobic010G244900 Sobic010G244900 Sobic006G179100--Sobic010G244900 Sobic004G320700 Sobic004G320700 Sobic006G179100--Sobic004G320700 Sobic002G292900 Sobic002G292900 Sobic006G179100--Sobic002G292900 Sobic006G128100 Sobic006G128100 Sobic006G179100--Sobic006G128100 Sobic002G306100 Sobic002G306100 Sobic006G179100--Sobic002G306100 Sobic002G079000--Sobic007G087000 Sobic002G079000--Sobic010G169900 Sobic002G079000--Sobic010G213500 Sobic004G198600 Sobic004G198600 Sobic002G079000--Sobic004G198600 Sobic002G079000--Sobic006G128100 Sobic006G250800 Sobic006G250800 Sobic002G079000--Sobic006G250800 Sobic007G172700 Sobic007G172700 Sobic002G079000--Sobic007G172700 Sobic001G237600 Sobic001G237600 Sobic002G079000--Sobic001G237600 Sobic001G490900 Sobic001G490900 Sobic002G079000--Sobic001G490900 Sobic010G213500--Sobic002G079000 Sobic002G355800 Sobic002G355800 Sobic010G213500--Sobic002G355800 Sobic010G213500--Sobic006G128100 Sobic010G213500--Sobic002G306100 Sobic010G213500--Sobic010G169900 Sobic010G213500--Sobic001G490900 Sobic010G213500--Sobic007G172700 Sobic003G398400 Sobic003G398400 Sobic010G213500--Sobic003G398400 Sobic007G125000 Sobic007G125000 Sobic010G213500--Sobic007G125000 Sobic007G087000--Sobic002G079000 Sobic007G076400 Sobic007G076400 Sobic007G087000--Sobic007G076400 Sobic007G087000--Sobic002G306100 Sobic008G116700 Sobic008G116700 Sobic007G087000--Sobic008G116700 Sobic007G087000--Sobic006G250800 Sobic001G014200 Sobic001G014200 Sobic007G087000--Sobic001G014200 Sobic007G087000--Sobic001G237600 Sobic007G087000--Sobic007G172700 Sobic009G107300 Sobic009G107300 Sobic007G087000--Sobic009G107300 Sobic001G308400 Sobic001G308400 Sobic010G169900--Sobic001G308400 Sobic010G169900--Sobic002G079000 Sobic009G128500 Sobic009G128500 Sobic010G169900--Sobic009G128500 Sobic010G169900--Sobic002G355800 Sobic002G227500 Sobic002G227500 Sobic010G169900--Sobic002G227500 Sobic010G169900--Sobic006G128100 Sobic009G194000 Sobic009G194000 Sobic010G169900--Sobic009G194000 Sobic001G389200 Sobic001G389200 Sobic010G169900--Sobic001G389200 Sobic010G169900--Sobic001G490900 Sobic004G172500 Sobic004G172500 Sobic010G244900--Sobic004G172500 Sobic010G244900--Sobic002G292900 Sobic004G213800 Sobic004G213800 Sobic010G244900--Sobic004G213800 Sobic010G244900--Sobic001G237600 Sobic010G244900--Sobic004G320700 Sobic006G039400 Sobic006G039400 Sobic010G244900--Sobic006G039400 Sobic003G043000 Sobic003G043000 Sobic010G244900--Sobic003G043000 Sobic003G241700 Sobic003G241700 Sobic010G244900--Sobic003G241700 Sobic005G150600 Sobic005G150600 Sobic010G244900--Sobic005G150600 Sobic004G320700--Sobic002G292900 Sobic004G320700--Sobic001G237600 Sobic004G320700--Sobic002G079000 Sobic010G186100 Sobic010G186100 Sobic004G320700--Sobic010G186100 Sobic004G320700--Sobic010G244900 Sobic006G210700 Sobic006G210700 Sobic004G320700--Sobic006G210700 Sobic004G320700--Sobic007G087000 Sobic006G032300 Sobic006G032300 Sobic004G320700--Sobic006G032300 Sobic009G228000 Sobic009G228000 Sobic004G320700--Sobic009G228000 Sobic002G292900--Sobic004G320700 Sobic002G292900--Sobic010G244900 Sobic009G166600 Sobic009G166600 Sobic002G292900--Sobic009G166600 Sobic002G313900 Sobic002G313900 Sobic002G292900--Sobic002G313900 Sobic002G292900--Sobic006G032300 Sobic010G086600 Sobic010G086600 Sobic002G292900--Sobic010G086600 Sobic005G034700 Sobic005G034700 Sobic002G292900--Sobic005G034700 Sobic002G292900--Sobic001G237600 Sobic001G340300 Sobic001G340300 Sobic002G292900--Sobic001G340300 Sobic003G394200 Sobic003G394200 Sobic006G128100--Sobic003G394200 Sobic006G128100--Sobic001G308400 Sobic006G128100--Sobic002G355800 Sobic006G128100--Sobic010G169900 Sobic006G128100--Sobic002G079000 Sobic006G128100--Sobic010G213500 Sobic003G189600 Sobic003G189600 Sobic006G128100--Sobic003G189600 Sobic003G346400 Sobic003G346400 Sobic006G128100--Sobic003G346400 Sobic006G128100--Sobic006G210700 Sobic002G306100--Sobic010G213500 Sobic002G306100--Sobic007G087000 Sobic003G365100 Sobic003G365100 Sobic002G306100--Sobic003G365100 Sobic002G306100--Sobic002G079000 Sobic003G316200 Sobic003G316200 Sobic002G306100--Sobic003G316200 Sobic002G306100--Sobic006G250800 Sobic002G306100--Sobic002G355800 Sobic003G181700 Sobic003G181700 Sobic002G306100--Sobic003G181700 Sobic005G177700 Sobic005G177700 Sobic002G306100--Sobic005G177700
Octagon: transcription factors


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