Gene annotation
Transcriptome id Sobic.006G192100.1,Sobic.006G192100.2
Synonym RVE1, Sb06g026500
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5YEK4 , A0A1Z5RES8
Pfam PF00249
Panther DB PTHR12802 PTHR12802:SF45
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G17300 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os04g49450.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a010065 , Zm00025a056692
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G451000 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
2 Sobic.005G181000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Acyl-CoA oxidase 2 ACX2 (At)(PubMedID : 27208977)@Acyl-CoA oxidase 2 ACX2 (At)(PubMedID : 27208977)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
3 Sobic.010G218100 expressed protein -
4 Sobic.008G015700 major facilitator superfamily antiporter, putative, expressed -
5 Sobic.003G026300 BES1/BZR1 homolog protein, putative, expressed -
6 Sobic.003G121400 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@expressed protein -
7 Sobic.009G027000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00253: IVD, isovaleryl-CoA dehydrogenase
8 Sobic.005G167300 BTBT3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed -
9 Sobic.001G439500 acyl CoA binding protein, putative, expressed -
10 Sobic.003G117000 late embryogenesis abundant protein, putative, expressed -
11 Sobic.002G115801 - -
12 Sobic.007G008800 VHS and GAT domain containing protein, expressed -
13 Sobic.004G188300 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS2-11 - C2H2 zinc finger protein, expressed -
14 Sobic.008G002600 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
15 Sobic.001G287301 - -
16 Sobic.003G285400 heat shock protein DnaJ, putative, expressed -
17 Sobic.005G139800 Brix domain containing protein, putative, expressed -
18 Sobic.001G271801 - -
19 Sobic.004G320000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.K009900 autophagy-related protein 8D, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein


Gene co-expression network
sample Sobic006G192100 Sobic006G192100 Sobic001G451000 Sobic001G451000 Sobic006G192100--Sobic001G451000 Sobic005G181000 Sobic005G181000 Sobic006G192100--Sobic005G181000 Sobic010G218100 Sobic010G218100 Sobic006G192100--Sobic010G218100 Sobic008G015700 Sobic008G015700 Sobic006G192100--Sobic008G015700 Sobic003G026300 Sobic003G026300 Sobic006G192100--Sobic003G026300 Sobic003G121400 Sobic003G121400 Sobic006G192100--Sobic003G121400 Sobic009G027000 Sobic009G027000 Sobic006G192100--Sobic009G027000 Sobic005G167300 Sobic005G167300 Sobic006G192100--Sobic005G167300 Sobic001G439500 Sobic001G439500 Sobic006G192100--Sobic001G439500 Sobic001G451000--Sobic005G167300 Sobic002G115801 Sobic002G115801 Sobic001G451000--Sobic002G115801 Sobic010G260500 Sobic010G260500 Sobic001G451000--Sobic010G260500 Sobic002G284200 Sobic002G284200 Sobic001G451000--Sobic002G284200 Sobic003G333600 Sobic003G333600 Sobic001G451000--Sobic003G333600 Sobic007G078000 Sobic007G078000 Sobic001G451000--Sobic007G078000 Sobic001G451000--Sobic001G439500 Sobic004G198000 Sobic004G198000 Sobic001G451000--Sobic004G198000 Sobic004G196700 Sobic004G196700 Sobic001G451000--Sobic004G196700 Sobic007G130600 Sobic007G130600 Sobic005G181000--Sobic007G130600 Sobic005G181000--Sobic009G027000 Sobic006G122400 Sobic006G122400 Sobic005G181000--Sobic006G122400 Sobic006G124900 Sobic006G124900 Sobic005G181000--Sobic006G124900 Sobic005G181000--Sobic001G439500 Sobic002G253500 Sobic002G253500 Sobic005G181000--Sobic002G253500 Sobic007G185900 Sobic007G185900 Sobic005G181000--Sobic007G185900 Sobic002G313300 Sobic002G313300 Sobic005G181000--Sobic002G313300 Sobic002G039500 Sobic002G039500 Sobic005G181000--Sobic002G039500 Sobic010G218500 Sobic010G218500 Sobic010G218100--Sobic010G218500 Sobic003G117000 Sobic003G117000 Sobic010G218100--Sobic003G117000 Sobic010G218100--Sobic006G122400 Sobic004G188300 Sobic004G188300 Sobic010G218100--Sobic004G188300 Sobic007G150200 Sobic007G150200 Sobic010G218100--Sobic007G150200 Sobic001G222300 Sobic001G222300 Sobic010G218100--Sobic001G222300 Sobic010G218100--Sobic002G039500 Sobic010G218100--Sobic002G253500 Sobic009G242800 Sobic009G242800 Sobic010G218100--Sobic009G242800 SobicK009900 SobicK009900 Sobic008G015700--SobicK009900 Sobic005G139800 Sobic005G139800 Sobic008G015700--Sobic005G139800 Sobic002G410200 Sobic002G410200 Sobic008G015700--Sobic002G410200 Sobic007G008800 Sobic007G008800 Sobic008G015700--Sobic007G008800 Sobic001G271801 Sobic001G271801 Sobic008G015700--Sobic001G271801 Sobic001G272000 Sobic001G272000 Sobic008G015700--Sobic001G272000 Sobic008G015700--Sobic003G121400 Sobic001G287301 Sobic001G287301 Sobic008G015700--Sobic001G287301 Sobic008G049701 Sobic008G049701 Sobic008G015700--Sobic008G049701 Sobic003G026300--Sobic007G008800 Sobic003G026300--Sobic004G188300 Sobic004G088400 Sobic004G088400 Sobic003G026300--Sobic004G088400 Sobic003G026300--Sobic005G167300 Sobic007G063200 Sobic007G063200 Sobic003G026300--Sobic007G063200 Sobic003G026300--Sobic001G451000 Sobic003G026300--Sobic005G139800 Sobic003G026300--Sobic002G115801 Sobic005G162600 Sobic005G162600 Sobic003G026300--Sobic005G162600 Sobic001G515600 Sobic001G515600 Sobic003G121400--Sobic001G515600 Sobic004G279300 Sobic004G279300 Sobic003G121400--Sobic004G279300 Sobic005G117901 Sobic005G117901 Sobic003G121400--Sobic005G117901 Sobic003G121400--Sobic003G117000 Sobic005G130450 Sobic005G130450 Sobic003G121400--Sobic005G130450 Sobic007G211000 Sobic007G211000 Sobic003G121400--Sobic007G211000 Sobic001G024200 Sobic001G024200 Sobic003G121400--Sobic001G024200 Sobic003G121400--Sobic001G222300 Sobic004G208400 Sobic004G208400 Sobic003G121400--Sobic004G208400 Sobic009G027000--Sobic006G122400 Sobic009G027000--Sobic005G181000 Sobic008G160700 Sobic008G160700 Sobic009G027000--Sobic008G160700 Sobic004G297400 Sobic004G297400 Sobic009G027000--Sobic004G297400 Sobic010G078100 Sobic010G078100 Sobic009G027000--Sobic010G078100 Sobic009G027000--Sobic007G130600 Sobic001G156100 Sobic001G156100 Sobic009G027000--Sobic001G156100 Sobic009G027000--Sobic007G078000 Sobic004G320000 Sobic004G320000 Sobic009G027000--Sobic004G320000 Sobic005G167300--Sobic001G451000 Sobic005G167300--Sobic002G115801 Sobic005G167300--Sobic004G198000 Sobic005G167300--Sobic003G026300 Sobic005G167300--Sobic002G284200 SobicK016900 SobicK016900 Sobic005G167300--SobicK016900 Sobic005G167300--Sobic007G150200 Sobic005G167300--Sobic004G188300 Sobic005G167300--Sobic003G117000 Sobic001G439500--Sobic001G024200 Sobic004G143700 Sobic004G143700 Sobic001G439500--Sobic004G143700 Sobic001G439500--Sobic007G211000 Sobic008G116500 Sobic008G116500 Sobic001G439500--Sobic008G116500 Sobic004G112500 Sobic004G112500 Sobic001G439500--Sobic004G112500 Sobic001G439500--Sobic001G451000 Sobic001G543900 Sobic001G543900 Sobic001G439500--Sobic001G543900 Sobic002G001600 Sobic002G001600 Sobic001G439500--Sobic002G001600 Sobic002G283300 Sobic002G283300 Sobic001G439500--Sobic002G283300
Octagon: transcription factors


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