Gene annotation
Transcriptome id Sobic.006G266600.1
Synonym Sb06g032880
Functional annotation MYB_Al protein, putative, expressed
UniProt C5YAI2
Pfam PF00249
Panther DB PTHR24078 PTHR24078:SF279
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G08520 : Duplicated homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os04g58020.1 : MYB_Al protein, putative, expressed
MaizeGDB (Corn) Zm00025a009304
Brachypodium KQJ85279 , KQJ85280
Barley -
Wheat TraesCS2D02G560100 , TraesCS2A02G554200 , TraesCS2B02G589700
Populus -


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cDNA sequences
Sobic.006G266600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G045600 G-patch domain containing protein, expressed K12840: RBM17, splicing factor 45
2 Sobic.009G232700 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
3 Sobic.008G175800 methyl-CpG binding domain containing protein, putative, expressed -
4 Sobic.007G062500 expressed protein -
5 Sobic.001G387600 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
6 Sobic.003G309900 OsFBX26 - F-box domain containing protein, expressed -
7 Sobic.004G027900 - -
8 Sobic.001G126100 OsFBO16 - F-box and other domain containing protein, expressed -
9 Sobic.007G207500 expressed protein -
10 Sobic.006G256100 SWIB/MDM2 domain containing protein, expressed K15223: UAF30, upstream activation factor subunit UAF30
11 Sobic.006G273200 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@protein kinase family protein, putative, expressed K14500: BR-signaling kinase
12 Sobic.007G152101 - K11982: E3 ubiquitin-protein ligase RNF115/126
13 Sobic.001G429300 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K13414: mitogen-activated protein kinase kinase kinase 1
14 Sobic.006G172900 scarecrow, putative, expressed -
15 Sobic.009G233300 60S ribosomal protein L18a-1, putative, expressed -
16 Sobic.007G158100 expressed protein -
17 Sobic.003G308700 BTBA2 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
18 Sobic.006G028300 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
19 Sobic.008G165700 expressed protein -
20 Sobic.006G119800 leucine rich repeat containing protein, expressed -


Gene co-expression network
sample Sobic006G266600 Sobic006G266600 Sobic010G045600 Sobic010G045600 Sobic006G266600--Sobic010G045600 Sobic009G232700 Sobic009G232700 Sobic006G266600--Sobic009G232700 Sobic008G175800 Sobic008G175800 Sobic006G266600--Sobic008G175800 Sobic007G062500 Sobic007G062500 Sobic006G266600--Sobic007G062500 Sobic001G387600 Sobic001G387600 Sobic006G266600--Sobic001G387600 Sobic003G309900 Sobic003G309900 Sobic006G266600--Sobic003G309900 Sobic004G027900 Sobic004G027900 Sobic006G266600--Sobic004G027900 Sobic001G126100 Sobic001G126100 Sobic006G266600--Sobic001G126100 Sobic007G207500 Sobic007G207500 Sobic006G266600--Sobic007G207500 Sobic010G269600 Sobic010G269600 Sobic010G045600--Sobic010G269600 Sobic008G062000 Sobic008G062000 Sobic010G045600--Sobic008G062000 Sobic006G109300 Sobic006G109300 Sobic010G045600--Sobic006G109300 Sobic010G045600--Sobic009G232700 Sobic001G022100 Sobic001G022100 Sobic010G045600--Sobic001G022100 Sobic008G165700 Sobic008G165700 Sobic010G045600--Sobic008G165700 Sobic009G137800 Sobic009G137800 Sobic010G045600--Sobic009G137800 Sobic010G000700 Sobic010G000700 Sobic010G045600--Sobic010G000700 Sobic010G055500 Sobic010G055500 Sobic010G045600--Sobic010G055500 Sobic001G107500 Sobic001G107500 Sobic009G232700--Sobic001G107500 Sobic003G298100 Sobic003G298100 Sobic009G232700--Sobic003G298100 Sobic009G022200 Sobic009G022200 Sobic009G232700--Sobic009G022200 Sobic009G232700--Sobic008G175800 Sobic007G205800 Sobic007G205800 Sobic009G232700--Sobic007G205800 Sobic001G368400 Sobic001G368400 Sobic009G232700--Sobic001G368400 Sobic001G131800 Sobic001G131800 Sobic009G232700--Sobic001G131800 Sobic003G324000 Sobic003G324000 Sobic009G232700--Sobic003G324000 Sobic010G056200 Sobic010G056200 Sobic009G232700--Sobic010G056200 Sobic008G175800--Sobic009G232700 Sobic001G394400 Sobic001G394400 Sobic008G175800--Sobic001G394400 Sobic008G175800--Sobic003G298100 Sobic006G273200 Sobic006G273200 Sobic008G175800--Sobic006G273200 Sobic002G157000 Sobic002G157000 Sobic008G175800--Sobic002G157000 Sobic009G087800 Sobic009G087800 Sobic008G175800--Sobic009G087800 Sobic008G175800--Sobic007G205800 Sobic001G504000 Sobic001G504000 Sobic008G175800--Sobic001G504000 Sobic002G248400 Sobic002G248400 Sobic008G175800--Sobic002G248400 Sobic001G043800 Sobic001G043800 Sobic007G062500--Sobic001G043800 Sobic001G427500 Sobic001G427500 Sobic007G062500--Sobic001G427500 Sobic004G227300 Sobic004G227300 Sobic007G062500--Sobic004G227300 Sobic004G086700 Sobic004G086700 Sobic007G062500--Sobic004G086700 Sobic010G184600 Sobic010G184600 Sobic007G062500--Sobic010G184600 Sobic009G094800 Sobic009G094800 Sobic007G062500--Sobic009G094800 Sobic001G053000 Sobic001G053000 Sobic007G062500--Sobic001G053000 Sobic004G174400 Sobic004G174400 Sobic007G062500--Sobic004G174400 Sobic009G190800 Sobic009G190800 Sobic007G062500--Sobic009G190800 Sobic001G387600--Sobic003G309900 Sobic006G119800 Sobic006G119800 Sobic001G387600--Sobic006G119800 Sobic003G413500 Sobic003G413500 Sobic001G387600--Sobic003G413500 Sobic009G233300 Sobic009G233300 Sobic001G387600--Sobic009G233300 Sobic001G191600 Sobic001G191600 Sobic001G387600--Sobic001G191600 Sobic008G146900 Sobic008G146900 Sobic001G387600--Sobic008G146900 Sobic001G222250 Sobic001G222250 Sobic001G387600--Sobic001G222250 Sobic001G253700 Sobic001G253700 Sobic001G387600--Sobic001G253700 Sobic010G009400 Sobic010G009400 Sobic001G387600--Sobic010G009400 Sobic003G309900--Sobic001G387600 Sobic004G083700 Sobic004G083700 Sobic003G309900--Sobic004G083700 Sobic007G108500 Sobic007G108500 Sobic003G309900--Sobic007G108500 Sobic003G309900--Sobic006G273200 Sobic003G309900--Sobic010G056200 Sobic010G280100 Sobic010G280100 Sobic003G309900--Sobic010G280100 Sobic003G309900--Sobic006G119800 Sobic006G228500 Sobic006G228500 Sobic003G309900--Sobic006G228500 Sobic003G309900--Sobic009G233300 Sobic001G258000 Sobic001G258000 Sobic004G027900--Sobic001G258000 Sobic001G427300 Sobic001G427300 Sobic004G027900--Sobic001G427300 Sobic004G253000 Sobic004G253000 Sobic004G027900--Sobic004G253000 Sobic004G027900--Sobic009G232700 Sobic010G111800 Sobic010G111800 Sobic004G027900--Sobic010G111800 Sobic001G067200 Sobic001G067200 Sobic004G027900--Sobic001G067200 Sobic004G027900--Sobic006G266600 Sobic004G274700 Sobic004G274700 Sobic004G027900--Sobic004G274700 Sobic006G209400 Sobic006G209400 Sobic004G027900--Sobic006G209400 Sobic010G149200 Sobic010G149200 Sobic001G126100--Sobic010G149200 Sobic004G164400 Sobic004G164400 Sobic001G126100--Sobic004G164400 Sobic003G221900 Sobic003G221900 Sobic001G126100--Sobic003G221900 Sobic002G104100 Sobic002G104100 Sobic001G126100--Sobic002G104100 Sobic001G169900 Sobic001G169900 Sobic001G126100--Sobic001G169900 Sobic001G297500 Sobic001G297500 Sobic001G126100--Sobic001G297500 Sobic010G243900 Sobic010G243900 Sobic001G126100--Sobic010G243900 Sobic004G042200 Sobic004G042200 Sobic001G126100--Sobic004G042200 Sobic006G105400 Sobic006G105400 Sobic001G126100--Sobic006G105400 Sobic004G135300 Sobic004G135300 Sobic007G207500--Sobic004G135300 Sobic003G122500 Sobic003G122500 Sobic007G207500--Sobic003G122500 Sobic003G123000 Sobic003G123000 Sobic007G207500--Sobic003G123000 Sobic010G143800 Sobic010G143800 Sobic007G207500--Sobic010G143800 Sobic010G079900 Sobic010G079900 Sobic007G207500--Sobic010G079900 Sobic007G132400 Sobic007G132400 Sobic007G207500--Sobic007G132400 Sobic001G298600 Sobic001G298600 Sobic007G207500--Sobic001G298600 Sobic004G237100 Sobic004G237100 Sobic007G207500--Sobic004G237100 Sobic007G207500--Sobic001G222250
Octagon: transcription factors


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