Gene annotation
Transcriptome id Sobic.007G207500.1,Sobic.007G207500.2
Synonym Sb07g027470
Functional annotation expressed protein
UniProt A0A1B6PJ58 , C5YIP2
Pfam -
Panther DB PTHR37213
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G33585 : -
RAP-DB (Rice) LOC_Os08g40190.1 : expressed protein
MaizeGDB (Corn) Zm00025a033820
Brachypodium -
Barley HORVU7Hr1G051250.2 , HORVU7Hr1G051250.1
Wheat -
Populus PNT38791 , PNT38793 , PNT38794


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G135300 - -
2 Sobic.003G122500 RNA binding protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
3 Sobic.003G123000 splicing factor 3 subunit 1, putative, expressed K12825: SF3A1, splicing factor 3A subunit 1
4 Sobic.010G143800 expressed protein -
5 Sobic.010G079900 AT hook-containing DNA-binding protein, putative, expressed -
6 Sobic.007G132400 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
7 Sobic.001G298600 ribosomal L18p/L5e family protein, expressed -
8 Sobic.004G237100 AP2/EREBP transcription factor BABY BOOM, putative, expressed -
9 Sobic.001G222250 - -
10 Sobic.006G145200 expressed protein -
11 Sobic.010G082700 expressed protein -
12 Sobic.006G172900 scarecrow, putative, expressed -
13 Sobic.010G021500 WD domain, G-beta repeat domain containing protein, expressed -
14 Sobic.002G046200 - -
15 Sobic.002G187801 - K03134: transcription initiation factor TFIID subunit 10
16 Sobic.005G027400 RNA recognition motif containing protein, expressed K13161: heterogeneous nuclear ribonucleoprotein R
17 Sobic.010G167900 expressed protein K14376: poly(A) polymerase
18 Sobic.004G095300 RNA recognition motif containing protein, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
19 Sobic.003G308700 BTBA2 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
20 Sobic.004G142900 - -


Gene co-expression network
sample Sobic007G207500 Sobic007G207500 Sobic004G135300 Sobic004G135300 Sobic007G207500--Sobic004G135300 Sobic003G122500 Sobic003G122500 Sobic007G207500--Sobic003G122500 Sobic003G123000 Sobic003G123000 Sobic007G207500--Sobic003G123000 Sobic010G143800 Sobic010G143800 Sobic007G207500--Sobic010G143800 Sobic010G079900 Sobic010G079900 Sobic007G207500--Sobic010G079900 Sobic007G132400 Sobic007G132400 Sobic007G207500--Sobic007G132400 Sobic001G298600 Sobic001G298600 Sobic007G207500--Sobic001G298600 Sobic004G237100 Sobic004G237100 Sobic007G207500--Sobic004G237100 Sobic001G222250 Sobic001G222250 Sobic007G207500--Sobic001G222250 Sobic003G084900 Sobic003G084900 Sobic004G135300--Sobic003G084900 Sobic004G135300--Sobic001G222250 Sobic006G042200 Sobic006G042200 Sobic004G135300--Sobic006G042200 Sobic001G409600 Sobic001G409600 Sobic004G135300--Sobic001G409600 Sobic006G273200 Sobic006G273200 Sobic004G135300--Sobic006G273200 Sobic003G088700 Sobic003G088700 Sobic004G135300--Sobic003G088700 Sobic005G128400 Sobic005G128400 Sobic004G135300--Sobic005G128400 Sobic007G009400 Sobic007G009400 Sobic004G135300--Sobic007G009400 Sobic001G267900 Sobic001G267900 Sobic004G135300--Sobic001G267900 Sobic007G084100 Sobic007G084100 Sobic003G122500--Sobic007G084100 Sobic005G160400 Sobic005G160400 Sobic003G122500--Sobic005G160400 Sobic003G122500--Sobic003G123000 Sobic001G241100 Sobic001G241100 Sobic003G122500--Sobic001G241100 Sobic001G119900 Sobic001G119900 Sobic003G122500--Sobic001G119900 Sobic010G171100 Sobic010G171100 Sobic003G122500--Sobic010G171100 Sobic002G047700 Sobic002G047700 Sobic003G122500--Sobic002G047700 Sobic006G199200 Sobic006G199200 Sobic003G122500--Sobic006G199200 Sobic004G257100 Sobic004G257100 Sobic003G122500--Sobic004G257100 Sobic003G123000--Sobic003G122500 Sobic004G095300 Sobic004G095300 Sobic003G123000--Sobic004G095300 Sobic001G222900 Sobic001G222900 Sobic003G123000--Sobic001G222900 Sobic003G123000--Sobic010G171100 Sobic002G280600 Sobic002G280600 Sobic003G123000--Sobic002G280600 Sobic004G246700 Sobic004G246700 Sobic003G123000--Sobic004G246700 Sobic001G218800 Sobic001G218800 Sobic003G123000--Sobic001G218800 Sobic008G165700 Sobic008G165700 Sobic003G123000--Sobic008G165700 Sobic001G473600 Sobic001G473600 Sobic003G123000--Sobic001G473600 Sobic005G027400 Sobic005G027400 Sobic010G143800--Sobic005G027400 Sobic001G081200 Sobic001G081200 Sobic010G143800--Sobic001G081200 Sobic007G161000 Sobic007G161000 Sobic010G143800--Sobic007G161000 Sobic004G006900 Sobic004G006900 Sobic010G143800--Sobic004G006900 Sobic001G529600 Sobic001G529600 Sobic010G143800--Sobic001G529600 Sobic001G365900 Sobic001G365900 Sobic010G143800--Sobic001G365900 Sobic002G294800 Sobic002G294800 Sobic010G143800--Sobic002G294800 Sobic010G021500 Sobic010G021500 Sobic010G143800--Sobic010G021500 Sobic003G398700 Sobic003G398700 Sobic010G143800--Sobic003G398700 Sobic010G079900--Sobic005G027400 Sobic001G309400 Sobic001G309400 Sobic010G079900--Sobic001G309400 Sobic001G260400 Sobic001G260400 Sobic010G079900--Sobic001G260400 Sobic010G079900--Sobic006G199200 Sobic003G086900 Sobic003G086900 Sobic010G079900--Sobic003G086900 Sobic003G184699 Sobic003G184699 Sobic010G079900--Sobic003G184699 Sobic004G142900 Sobic004G142900 Sobic010G079900--Sobic004G142900 Sobic003G139900 Sobic003G139900 Sobic010G079900--Sobic003G139900 Sobic010G079900--Sobic001G222250 Sobic004G084300 Sobic004G084300 Sobic007G132400--Sobic004G084300 Sobic003G241200 Sobic003G241200 Sobic007G132400--Sobic003G241200 Sobic008G067600 Sobic008G067600 Sobic007G132400--Sobic008G067600 Sobic007G104800 Sobic007G104800 Sobic007G132400--Sobic007G104800 Sobic003G220200 Sobic003G220200 Sobic007G132400--Sobic003G220200 Sobic001G107500 Sobic001G107500 Sobic007G132400--Sobic001G107500 Sobic003G081000 Sobic003G081000 Sobic007G132400--Sobic003G081000 Sobic002G320500 Sobic002G320500 Sobic007G132400--Sobic002G320500 Sobic002G310200 Sobic002G310200 Sobic007G132400--Sobic002G310200 Sobic001G298600--Sobic007G132400 Sobic006G228500 Sobic006G228500 Sobic001G298600--Sobic006G228500 Sobic004G121100 Sobic004G121100 Sobic001G298600--Sobic004G121100 Sobic001G298600--Sobic001G107500 Sobic001G298600--Sobic002G310200 Sobic001G298600--Sobic006G273200 Sobic009G215800 Sobic009G215800 Sobic001G298600--Sobic009G215800 Sobic003G176600 Sobic003G176600 Sobic001G298600--Sobic003G176600 Sobic001G281600 Sobic001G281600 Sobic001G298600--Sobic001G281600 Sobic001G088100 Sobic001G088100 Sobic004G237100--Sobic001G088100 Sobic001G375300 Sobic001G375300 Sobic004G237100--Sobic001G375300 Sobic002G277600 Sobic002G277600 Sobic004G237100--Sobic002G277600 Sobic005G021500 Sobic005G021500 Sobic004G237100--Sobic005G021500 Sobic004G088200 Sobic004G088200 Sobic004G237100--Sobic004G088200 Sobic005G079800 Sobic005G079800 Sobic004G237100--Sobic005G079800 Sobic004G264300 Sobic004G264300 Sobic004G237100--Sobic004G264300 Sobic002G127100 Sobic002G127100 Sobic004G237100--Sobic002G127100 Sobic001G124000 Sobic001G124000 Sobic004G237100--Sobic001G124000 Sobic001G222250--Sobic010G143800 Sobic001G222250--Sobic005G027400 Sobic001G222250--Sobic010G079900 Sobic001G222250--Sobic004G135300 Sobic001G191600 Sobic001G191600 Sobic001G222250--Sobic001G191600 Sobic003G109700 Sobic003G109700 Sobic001G222250--Sobic003G109700 Sobic001G222250--Sobic001G081200 Sobic001G222250--Sobic001G298600 Sobic001G362200 Sobic001G362200 Sobic001G222250--Sobic001G362200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.