Gene annotation
Transcriptome id Sobic.002G046200.1
Synonym
Functional annotation -
UniProt A0A1B6Q980
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.002G046200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G221900 helix-loop-helix DNA-binding domain containing protein, expressed -
2 Sobic.001G387600 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
3 Sobic.001G126100 OsFBO16 - F-box and other domain containing protein, expressed -
4 Sobic.010G021500 WD domain, G-beta repeat domain containing protein, expressed -
5 Sobic.004G205800 cyclin-dependent kinase G-1, putative, expressed K08818: cell division cycle 2-like
6 Sobic.010G149200 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
7 Sobic.006G145200 expressed protein -
8 Sobic.003G086900 C2 domain containing protein, putative, expressed -
9 Sobic.007G110700 serine/threonine-protein kinase PRP4, putative, expressed K08827: serine/threonine-protein kinase PRP4
10 Sobic.007G207500 expressed protein -
11 Sobic.001G191600 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
12 Sobic.010G079900 AT hook-containing DNA-binding protein, putative, expressed -
13 Sobic.001G222250 - -
14 Sobic.003G340600 VHS and GAT domain containing protein, expressed -
15 Sobic.009G082000 TKL_IRAK_DUF26-lc.3 - DUF26 kinases have homology to DUF26 containing loci, expressed -
16 Sobic.006G065600 expressed protein -
17 Sobic.001G241100 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
18 Sobic.001G122832 - K13414: mitogen-activated protein kinase kinase kinase 1
19 Sobic.003G029700 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
20 Sobic.006G199200 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14


Gene co-expression network
sample Sobic002G046200 Sobic002G046200 Sobic003G221900 Sobic003G221900 Sobic002G046200--Sobic003G221900 Sobic001G387600 Sobic001G387600 Sobic002G046200--Sobic001G387600 Sobic001G126100 Sobic001G126100 Sobic002G046200--Sobic001G126100 Sobic010G021500 Sobic010G021500 Sobic002G046200--Sobic010G021500 Sobic004G205800 Sobic004G205800 Sobic002G046200--Sobic004G205800 Sobic010G149200 Sobic010G149200 Sobic002G046200--Sobic010G149200 Sobic006G145200 Sobic006G145200 Sobic002G046200--Sobic006G145200 Sobic003G086900 Sobic003G086900 Sobic002G046200--Sobic003G086900 Sobic007G110700 Sobic007G110700 Sobic002G046200--Sobic007G110700 Sobic001G122832 Sobic001G122832 Sobic003G221900--Sobic001G122832 Sobic003G316500 Sobic003G316500 Sobic003G221900--Sobic003G316500 Sobic003G340600 Sobic003G340600 Sobic003G221900--Sobic003G340600 Sobic001G389100 Sobic001G389100 Sobic003G221900--Sobic001G389100 Sobic003G221900--Sobic010G021500 Sobic006G133900 Sobic006G133900 Sobic003G221900--Sobic006G133900 Sobic010G147100 Sobic010G147100 Sobic003G221900--Sobic010G147100 Sobic001G332500 Sobic001G332500 Sobic003G221900--Sobic001G332500 Sobic003G029700 Sobic003G029700 Sobic003G221900--Sobic003G029700 Sobic003G309900 Sobic003G309900 Sobic001G387600--Sobic003G309900 Sobic006G119800 Sobic006G119800 Sobic001G387600--Sobic006G119800 Sobic003G413500 Sobic003G413500 Sobic001G387600--Sobic003G413500 Sobic009G233300 Sobic009G233300 Sobic001G387600--Sobic009G233300 Sobic001G191600 Sobic001G191600 Sobic001G387600--Sobic001G191600 Sobic008G146900 Sobic008G146900 Sobic001G387600--Sobic008G146900 Sobic001G222250 Sobic001G222250 Sobic001G387600--Sobic001G222250 Sobic001G253700 Sobic001G253700 Sobic001G387600--Sobic001G253700 Sobic010G009400 Sobic010G009400 Sobic001G387600--Sobic010G009400 Sobic001G126100--Sobic010G149200 Sobic004G164400 Sobic004G164400 Sobic001G126100--Sobic004G164400 Sobic001G126100--Sobic003G221900 Sobic002G104100 Sobic002G104100 Sobic001G126100--Sobic002G104100 Sobic001G169900 Sobic001G169900 Sobic001G126100--Sobic001G169900 Sobic001G297500 Sobic001G297500 Sobic001G126100--Sobic001G297500 Sobic010G243900 Sobic010G243900 Sobic001G126100--Sobic010G243900 Sobic004G042200 Sobic004G042200 Sobic001G126100--Sobic004G042200 Sobic006G105400 Sobic006G105400 Sobic001G126100--Sobic006G105400 Sobic003G398700 Sobic003G398700 Sobic010G021500--Sobic003G398700 Sobic010G167900 Sobic010G167900 Sobic010G021500--Sobic010G167900 Sobic008G113100 Sobic008G113100 Sobic010G021500--Sobic008G113100 Sobic006G096900 Sobic006G096900 Sobic010G021500--Sobic006G096900 Sobic001G456900 Sobic001G456900 Sobic010G021500--Sobic001G456900 Sobic010G021500--Sobic010G149200 Sobic005G027400 Sobic005G027400 Sobic010G021500--Sobic005G027400 Sobic005G100700 Sobic005G100700 Sobic010G021500--Sobic005G100700 Sobic010G021500--Sobic003G221900 Sobic001G214300 Sobic001G214300 Sobic004G205800--Sobic001G214300 Sobic004G205800--Sobic003G029700 Sobic009G026500 Sobic009G026500 Sobic004G205800--Sobic009G026500 Sobic004G205800--Sobic001G191600 Sobic008G192600 Sobic008G192600 Sobic004G205800--Sobic008G192600 Sobic005G144400 Sobic005G144400 Sobic004G205800--Sobic005G144400 Sobic001G365900 Sobic001G365900 Sobic004G205800--Sobic001G365900 Sobic003G148000 Sobic003G148000 Sobic004G205800--Sobic003G148000 Sobic001G318432 Sobic001G318432 Sobic004G205800--Sobic001G318432 Sobic010G149200--Sobic006G145200 Sobic010G149200--Sobic010G243900 Sobic010G149200--Sobic010G021500 Sobic010G149200--Sobic001G126100 Sobic010G149200--Sobic004G164400 Sobic010G149200--Sobic003G340600 Sobic010G149200--Sobic004G042200 Sobic010G143800 Sobic010G143800 Sobic010G149200--Sobic010G143800 Sobic010G149200--Sobic003G221900 Sobic006G145200--Sobic010G149200 Sobic006G145200--Sobic010G243900 Sobic002G064750 Sobic002G064750 Sobic006G145200--Sobic002G064750 Sobic006G145200--Sobic010G143800 Sobic007G023200 Sobic007G023200 Sobic006G145200--Sobic007G023200 Sobic001G035900 Sobic001G035900 Sobic006G145200--Sobic001G035900 Sobic006G145200--Sobic001G191600 Sobic006G145200--Sobic004G164400 Sobic001G198100 Sobic001G198100 Sobic006G145200--Sobic001G198100 Sobic007G193700 Sobic007G193700 Sobic003G086900--Sobic007G193700 Sobic006G225900 Sobic006G225900 Sobic003G086900--Sobic006G225900 Sobic010G196500 Sobic010G196500 Sobic003G086900--Sobic010G196500 Sobic004G174200 Sobic004G174200 Sobic003G086900--Sobic004G174200 Sobic001G016700 Sobic001G016700 Sobic003G086900--Sobic001G016700 Sobic001G390800 Sobic001G390800 Sobic003G086900--Sobic001G390800 Sobic001G268200 Sobic001G268200 Sobic003G086900--Sobic001G268200 Sobic001G121200 Sobic001G121200 Sobic003G086900--Sobic001G121200 Sobic003G422500 Sobic003G422500 Sobic003G086900--Sobic003G422500 Sobic005G222100 Sobic005G222100 Sobic007G110700--Sobic005G222100 Sobic001G300100 Sobic001G300100 Sobic007G110700--Sobic001G300100 Sobic003G217900 Sobic003G217900 Sobic007G110700--Sobic003G217900 Sobic007G110700--Sobic003G398700 Sobic007G159900 Sobic007G159900 Sobic007G110700--Sobic007G159900 Sobic007G110700--Sobic010G021500 Sobic007G110700--Sobic001G456900 Sobic003G168100 Sobic003G168100 Sobic007G110700--Sobic003G168100 Sobic005G008800 Sobic005G008800 Sobic007G110700--Sobic005G008800
Octagon: transcription factors


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