Gene annotation
Transcriptome id Sobic.006G270100.2,Sobic.006G270100.1
Synonym ATALN, ALN, Sb06g033160
Functional annotation allantoinase, putative, expressed
UniProt C5YAL6 , A0A1Z5RFM9
Pfam PF01979
Panther DB PTHR11647 PTHR11647:SF4
NCBI CDD KOG2584; Dihydroorotase and related enzymes
KEGG Orthology K01466; allantoinase
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT4G04955 : allantoinase
RAP-DB (Rice) LOC_Os04g58390.1 : allantoinase, putative, expressed
MaizeGDB (Corn) Zm00025a057398
Brachypodium KQJ85339 , KQJ85338 , KQJ85356
Barley HORVU2Hr1G118740.11
Wheat TraesCS2B02G595300 , TraesCS2A02G587900 , TraesCS2D02G565300
Populus -


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cDNA sequences
Sobic.006G270100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G524000 CBS domain containing protein, expressed K16302: metal transporter CNNM
2 Sobic.010G186100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.006G173800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@copper-transporting ATPase 3, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
4 Sobic.003G425600 - -
5 Sobic.006G141300 sensitivity to red light reduced protein 1, putative, expressed -
6 Sobic.003G283200 - -
7 Sobic.004G311400 PHD-finger domain containing protein, putative, expressed -
8 Sobic.004G317300 "O1(Ortholog in maize:Wang et al., 2012)"(PubMedID : 31659891)@XI-I, putative, expressed K10357: myosin V
9 Sobic.008G144900 DUF221 domain containing protein, expressed -
10 Sobic.007G028100 WD repeat-containing protein, putative, expressed -
11 Sobic.002G294400 protein phosphatase 2C, putative, expressed K17499: PPM1G, protein phosphatase 1G
12 Sobic.003G338000 non-green plastid inner envelope membrane protein, putative, expressed -
13 Sobic.006G004500 arginase, putative, expressed K01476: E3.5.3.1, rocF, arginase
14 Sobic.003G159500 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.008G029700 - -
16 Sobic.001G452100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
17 Sobic.001G430400 Ser/Thr protein phosphatase family protein, putative, expressed -
18 Sobic.004G320700 CCR4-NOT transcription factor, putative, expressed K12605: CNOT2, CCR4-NOT transcription complex subunit 2
19 Sobic.006G245100 Ca exchanger(PubMedID : 22196357)@sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
20 Sobic.002G292900 protein binding protein, putative, expressed -


Gene co-expression network
sample Sobic006G270100 Sobic006G270100 Sobic001G524000 Sobic001G524000 Sobic006G270100--Sobic001G524000 Sobic010G186100 Sobic010G186100 Sobic006G270100--Sobic010G186100 Sobic006G173800 Sobic006G173800 Sobic006G270100--Sobic006G173800 Sobic003G425600 Sobic003G425600 Sobic006G270100--Sobic003G425600 Sobic006G141300 Sobic006G141300 Sobic006G270100--Sobic006G141300 Sobic003G283200 Sobic003G283200 Sobic006G270100--Sobic003G283200 Sobic004G311400 Sobic004G311400 Sobic006G270100--Sobic004G311400 Sobic004G317300 Sobic004G317300 Sobic006G270100--Sobic004G317300 Sobic008G144900 Sobic008G144900 Sobic006G270100--Sobic008G144900 Sobic009G166600 Sobic009G166600 Sobic001G524000--Sobic009G166600 Sobic005G197100 Sobic005G197100 Sobic001G524000--Sobic005G197100 Sobic004G160700 Sobic004G160700 Sobic001G524000--Sobic004G160700 Sobic003G331100 Sobic003G331100 Sobic001G524000--Sobic003G331100 Sobic001G524000--Sobic006G141300 Sobic006G063700 Sobic006G063700 Sobic001G524000--Sobic006G063700 Sobic003G304200 Sobic003G304200 Sobic001G524000--Sobic003G304200 Sobic001G524000--Sobic003G425600 Sobic003G284700 Sobic003G284700 Sobic001G524000--Sobic003G284700 Sobic004G320700 Sobic004G320700 Sobic010G186100--Sobic004G320700 Sobic010G244900 Sobic010G244900 Sobic010G186100--Sobic010G244900 Sobic002G031900 Sobic002G031900 Sobic010G186100--Sobic002G031900 Sobic006G032300 Sobic006G032300 Sobic010G186100--Sobic006G032300 Sobic001G237600 Sobic001G237600 Sobic010G186100--Sobic001G237600 Sobic002G292900 Sobic002G292900 Sobic010G186100--Sobic002G292900 Sobic010G071100 Sobic010G071100 Sobic010G186100--Sobic010G071100 Sobic004G209700 Sobic004G209700 Sobic010G186100--Sobic004G209700 Sobic003G329900 Sobic003G329900 Sobic010G186100--Sobic003G329900 Sobic003G338000 Sobic003G338000 Sobic006G173800--Sobic003G338000 Sobic006G173800--Sobic004G317300 Sobic004G189200 Sobic004G189200 Sobic006G173800--Sobic004G189200 Sobic002G213300 Sobic002G213300 Sobic006G173800--Sobic002G213300 Sobic006G239000 Sobic006G239000 Sobic006G173800--Sobic006G239000 Sobic001G122900 Sobic001G122900 Sobic006G173800--Sobic001G122900 Sobic010G177400 Sobic010G177400 Sobic006G173800--Sobic010G177400 Sobic006G257800 Sobic006G257800 Sobic006G173800--Sobic006G257800 Sobic001G062300 Sobic001G062300 Sobic006G173800--Sobic001G062300 Sobic005G083160 Sobic005G083160 Sobic003G425600--Sobic005G083160 Sobic010G107300 Sobic010G107300 Sobic003G425600--Sobic010G107300 Sobic001G452100 Sobic001G452100 Sobic003G425600--Sobic001G452100 Sobic002G015800 Sobic002G015800 Sobic003G425600--Sobic002G015800 Sobic009G218100 Sobic009G218100 Sobic003G425600--Sobic009G218100 Sobic010G022600 Sobic010G022600 Sobic003G425600--Sobic010G022600 Sobic003G004500 Sobic003G004500 Sobic003G425600--Sobic003G004500 Sobic003G101200 Sobic003G101200 Sobic003G425600--Sobic003G101200 Sobic008G064250 Sobic008G064250 Sobic003G425600--Sobic008G064250 Sobic006G141300--Sobic001G524000 Sobic004G321200 Sobic004G321200 Sobic006G141300--Sobic004G321200 Sobic002G234200 Sobic002G234200 Sobic006G141300--Sobic002G234200 Sobic002G060400 Sobic002G060400 Sobic006G141300--Sobic002G060400 Sobic002G406300 Sobic002G406300 Sobic006G141300--Sobic002G406300 Sobic008G013200 Sobic008G013200 Sobic006G141300--Sobic008G013200 Sobic002G165700 Sobic002G165700 Sobic006G141300--Sobic002G165700 Sobic006G210700 Sobic006G210700 Sobic006G141300--Sobic006G210700 Sobic006G141300--Sobic004G320700 Sobic010G150700 Sobic010G150700 Sobic003G283200--Sobic010G150700 Sobic003G283200--Sobic006G270100 Sobic003G283200--Sobic003G338000 Sobic008G145800 Sobic008G145800 Sobic003G283200--Sobic008G145800 Sobic005G132200 Sobic005G132200 Sobic003G283200--Sobic005G132200 Sobic003G283200--Sobic002G031900 Sobic001G368600 Sobic001G368600 Sobic003G283200--Sobic001G368600 Sobic002G294400 Sobic002G294400 Sobic003G283200--Sobic002G294400 Sobic004G271600 Sobic004G271600 Sobic003G283200--Sobic004G271600 Sobic002G029100 Sobic002G029100 Sobic004G311400--Sobic002G029100 Sobic008G096000 Sobic008G096000 Sobic004G311400--Sobic008G096000 Sobic003G038100 Sobic003G038100 Sobic004G311400--Sobic003G038100 Sobic005G200800 Sobic005G200800 Sobic004G311400--Sobic005G200800 Sobic005G207500 Sobic005G207500 Sobic004G311400--Sobic005G207500 Sobic002G153700 Sobic002G153700 Sobic004G311400--Sobic002G153700 Sobic002G245000 Sobic002G245000 Sobic004G311400--Sobic002G245000 Sobic003G214600 Sobic003G214600 Sobic004G311400--Sobic003G214600 Sobic010G089400 Sobic010G089400 Sobic004G311400--Sobic010G089400 Sobic005G100700 Sobic005G100700 Sobic004G317300--Sobic005G100700 Sobic004G317300--Sobic002G029100 Sobic004G317300--Sobic003G214600 Sobic006G019300 Sobic006G019300 Sobic004G317300--Sobic006G019300 Sobic003G388100 Sobic003G388100 Sobic004G317300--Sobic003G388100 Sobic001G277900 Sobic001G277900 Sobic004G317300--Sobic001G277900 Sobic004G317300--Sobic010G089400 Sobic006G169800 Sobic006G169800 Sobic004G317300--Sobic006G169800 Sobic003G360400 Sobic003G360400 Sobic004G317300--Sobic003G360400 Sobic001G430400 Sobic001G430400 Sobic008G144900--Sobic001G430400 Sobic002G346400 Sobic002G346400 Sobic008G144900--Sobic002G346400 Sobic008G144900--Sobic006G032300 Sobic001G446850 Sobic001G446850 Sobic008G144900--Sobic001G446850 Sobic008G144900--Sobic010G089400 Sobic008G060000 Sobic008G060000 Sobic008G144900--Sobic008G060000 Sobic009G074400 Sobic009G074400 Sobic008G144900--Sobic009G074400 Sobic008G144900--Sobic003G388100 Sobic008G039100 Sobic008G039100 Sobic008G144900--Sobic008G039100
Octagon: transcription factors


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