Gene annotation
Transcriptome id Sobic.007G015900.1
Synonym
Functional annotation -
UniProt A0A1B6PEY7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G016900 OsFBD13 - F-box and FBD domain containing protein, expressed -
2 Sobic.007G198800 BTB/POZ domain containing protein, expressed K10523: speckle-type POZ protein
3 Sobic.002G253600 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
4 Sobic.003G244700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
5 Sobic.008G156200 zinc finger family protein, putative, expressed K16277: E3 ubiquitin-protein ligase DRIP
6 Sobic.010G270800 GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.002G059866 - -
8 Sobic.004G114000 clathrin adaptor complex small chain domain containing protein, expressed -
9 Sobic.010G235500 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
10 Sobic.006G203200 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
11 Sobic.007G018700 kinesin motor domain containing protein, putative, expressed -
12 Sobic.003G184400 jmjC domain-containing protein 4, putative, expressed -
13 Sobic.010G112700 NHL repeat-containing protein, putative, expressed -
14 Sobic.004G338500 transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
15 Sobic.005G011000 Rf1, mitochondrial precursor, putative, expressed -
16 Sobic.005G072400 expressed protein -
17 Sobic.001G130700 domain of unknown function DUF966 domain containing protein, expressed -
18 Sobic.005G131800 DNA-directed RNA polymerase III subunit RPC1, putative, expressed K03006: RPB1, DNA-directed RNA polymerase II subunit RPB1
19 Sobic.002G159200 WD domain, G-beta repeat domain containing protein, expressed K17985: activating molecule in BECN1-regulated autophagy protein 1
20 Sobic.002G019600 OsFBX234 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic007G015900 Sobic007G015900 Sobic002G016900 Sobic002G016900 Sobic007G015900--Sobic002G016900 Sobic007G198800 Sobic007G198800 Sobic007G015900--Sobic007G198800 Sobic002G253600 Sobic002G253600 Sobic007G015900--Sobic002G253600 Sobic003G244700 Sobic003G244700 Sobic007G015900--Sobic003G244700 Sobic008G156200 Sobic008G156200 Sobic007G015900--Sobic008G156200 Sobic010G270800 Sobic010G270800 Sobic007G015900--Sobic010G270800 Sobic002G059866 Sobic002G059866 Sobic007G015900--Sobic002G059866 Sobic004G114000 Sobic004G114000 Sobic007G015900--Sobic004G114000 Sobic010G235500 Sobic010G235500 Sobic007G015900--Sobic010G235500 Sobic002G016900--Sobic002G059866 Sobic006G203200 Sobic006G203200 Sobic002G016900--Sobic006G203200 Sobic002G016900--Sobic002G253600 Sobic002G016900--Sobic008G156200 Sobic003G174200 Sobic003G174200 Sobic002G016900--Sobic003G174200 Sobic002G016900--Sobic010G270800 Sobic003G022200 Sobic003G022200 Sobic002G016900--Sobic003G022200 Sobic002G016900--Sobic003G244700 Sobic003G035500 Sobic003G035500 Sobic002G016900--Sobic003G035500 Sobic005G131800 Sobic005G131800 Sobic007G198800--Sobic005G131800 Sobic007G198800--Sobic002G016900 Sobic007G198800--Sobic002G253600 Sobic004G038900 Sobic004G038900 Sobic007G198800--Sobic004G038900 Sobic007G198800--Sobic007G015900 Sobic003G107900 Sobic003G107900 Sobic007G198800--Sobic003G107900 Sobic007G198800--Sobic003G244700 Sobic007G198800--Sobic008G156200 Sobic004G338500 Sobic004G338500 Sobic007G198800--Sobic004G338500 Sobic005G072400 Sobic005G072400 Sobic002G253600--Sobic005G072400 Sobic002G253600--Sobic002G016900 Sobic002G253600--Sobic003G244700 Sobic009G126800 Sobic009G126800 Sobic002G253600--Sobic009G126800 Sobic002G253600--Sobic006G203200 Sobic002G253600--Sobic008G156200 Sobic006G278200 Sobic006G278200 Sobic002G253600--Sobic006G278200 Sobic002G253600--Sobic003G022200 Sobic003G415100 Sobic003G415100 Sobic002G253600--Sobic003G415100 Sobic003G244700--Sobic006G203200 Sobic003G244700--Sobic002G253600 Sobic002G019600 Sobic002G019600 Sobic003G244700--Sobic002G019600 Sobic002G050500 Sobic002G050500 Sobic003G244700--Sobic002G050500 Sobic002G362300 Sobic002G362300 Sobic003G244700--Sobic002G362300 Sobic001G371000 Sobic001G371000 Sobic003G244700--Sobic001G371000 Sobic003G244700--Sobic010G235500 Sobic003G244700--Sobic002G016900 Sobic001G384600 Sobic001G384600 Sobic003G244700--Sobic001G384600 Sobic010G207400 Sobic010G207400 Sobic008G156200--Sobic010G207400 Sobic002G247300 Sobic002G247300 Sobic008G156200--Sobic002G247300 Sobic008G156200--Sobic003G035500 Sobic004G075700 Sobic004G075700 Sobic008G156200--Sobic004G075700 Sobic008G156200--Sobic005G131800 Sobic003G412200 Sobic003G412200 Sobic008G156200--Sobic003G412200 Sobic010G112700 Sobic010G112700 Sobic008G156200--Sobic010G112700 Sobic008G156200--Sobic002G016900 Sobic008G156200--Sobic004G038900 Sobic010G270800--Sobic002G016900 Sobic010G270800--Sobic002G059866 Sobic010G270800--Sobic003G022200 Sobic007G078300 Sobic007G078300 Sobic010G270800--Sobic007G078300 Sobic007G209000 Sobic007G209000 Sobic010G270800--Sobic007G209000 Sobic010G270800--Sobic002G253600 Sobic001G130700 Sobic001G130700 Sobic010G270800--Sobic001G130700 Sobic009G090100 Sobic009G090100 Sobic010G270800--Sobic009G090100 Sobic010G270800--Sobic004G038900 Sobic002G059866--Sobic002G016900 Sobic002G059866--Sobic010G270800 Sobic002G059866--Sobic003G022200 Sobic002G059866--Sobic002G253600 Sobic002G059866--Sobic003G244700 Sobic002G059866--Sobic002G019600 Sobic010G262900 Sobic010G262900 Sobic002G059866--Sobic010G262900 Sobic002G059866--Sobic003G174200 Sobic002G059866--Sobic008G156200 Sobic004G114000--Sobic002G019600 Sobic004G114000--Sobic002G016900 Sobic007G043500 Sobic007G043500 Sobic004G114000--Sobic007G043500 Sobic006G067200 Sobic006G067200 Sobic004G114000--Sobic006G067200 Sobic006G039900 Sobic006G039900 Sobic004G114000--Sobic006G039900 Sobic008G073000 Sobic008G073000 Sobic004G114000--Sobic008G073000 Sobic002G045400 Sobic002G045400 Sobic004G114000--Sobic002G045400 Sobic004G114000--Sobic003G244700 Sobic002G067800 Sobic002G067800 Sobic004G114000--Sobic002G067800 Sobic010G235500--Sobic003G244700 Sobic002G223300 Sobic002G223300 Sobic010G235500--Sobic002G223300 Sobic003G412100 Sobic003G412100 Sobic010G235500--Sobic003G412100 Sobic010G173900 Sobic010G173900 Sobic010G235500--Sobic010G173900 Sobic006G028700 Sobic006G028700 Sobic010G235500--Sobic006G028700 Sobic004G197900 Sobic004G197900 Sobic010G235500--Sobic004G197900 Sobic003G343600 Sobic003G343600 Sobic010G235500--Sobic003G343600 Sobic001G045700 Sobic001G045700 Sobic010G235500--Sobic001G045700 Sobic010G235500--Sobic006G039900
Octagon: transcription factors


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