Gene annotation
Transcriptome id Sobic.010G235500.3,Sobic.010G235500.1,Sobic.010G235500.2
Synonym Sb10g027730
Functional annotation OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed
UniProt A0A1W0VUE8 , C5Z8A1 , C5Z894
Pfam PF00646
Panther DB PTHR32212 PTHR32212:SF121
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G18780 : F-box/RNI-like superfamily protein,F-box/RNI-like/FBD-like domains-containing protein
RAP-DB (Rice) LOC_Os02g06520.1,LOC_Os06g47100.1 : OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed,OsFBX203 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G235500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G244700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
2 Sobic.002G223300 nucleoporin p58/p45, putative, expressed K14307: NUPL1, nucleoporin p58/p45
3 Sobic.003G412100 aspartokinase 3, chloroplast precursor, putative, expressed K00928: aspartate kinase
4 Sobic.010G173900 expressed protein -
5 Sobic.006G028700 expressed protein -
6 Sobic.004G197900 - -
7 Sobic.003G343600 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.001G045700 "CESA3-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA2 - cellulose synthase, expressed K10999: cellulose synthase A
9 Sobic.006G039900 - -
10 Sobic.006G076300 RING-H2 finger protein, putative, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78
11 Sobic.002G421700 OsFBX368 - F-box domain containing protein, expressed -
12 Sobic.003G140900 OsFBL33 - F-box domain and LRR containing protein, expressed -
13 Sobic.002G050500 type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed -
14 Sobic.002G019600 OsFBX234 - F-box domain containing protein, expressed -
15 Sobic.001G215400 OsFBX387 - F-box domain containing protein, expressed -
16 Sobic.002G105000 OsFBD15 - F-box and FBD domain containing protein, expressed -
17 Sobic.001G522400 FHA domain containing protein, putative, expressed -
18 Sobic.001G454301 - -
19 Sobic.001G246500 GTPase of unknown function domain containing protein, putative, expressed -
20 Sobic.001G065300 GRF zinc finger family protein, expressed -


Gene co-expression network
sample Sobic010G235500 Sobic010G235500 Sobic003G244700 Sobic003G244700 Sobic010G235500--Sobic003G244700 Sobic002G223300 Sobic002G223300 Sobic010G235500--Sobic002G223300 Sobic003G412100 Sobic003G412100 Sobic010G235500--Sobic003G412100 Sobic010G173900 Sobic010G173900 Sobic010G235500--Sobic010G173900 Sobic006G028700 Sobic006G028700 Sobic010G235500--Sobic006G028700 Sobic004G197900 Sobic004G197900 Sobic010G235500--Sobic004G197900 Sobic003G343600 Sobic003G343600 Sobic010G235500--Sobic003G343600 Sobic001G045700 Sobic001G045700 Sobic010G235500--Sobic001G045700 Sobic006G039900 Sobic006G039900 Sobic010G235500--Sobic006G039900 Sobic006G203200 Sobic006G203200 Sobic003G244700--Sobic006G203200 Sobic002G253600 Sobic002G253600 Sobic003G244700--Sobic002G253600 Sobic002G019600 Sobic002G019600 Sobic003G244700--Sobic002G019600 Sobic002G050500 Sobic002G050500 Sobic003G244700--Sobic002G050500 Sobic002G362300 Sobic002G362300 Sobic003G244700--Sobic002G362300 Sobic001G371000 Sobic001G371000 Sobic003G244700--Sobic001G371000 Sobic003G244700--Sobic010G235500 Sobic002G016900 Sobic002G016900 Sobic003G244700--Sobic002G016900 Sobic001G384600 Sobic001G384600 Sobic003G244700--Sobic001G384600 Sobic002G334600 Sobic002G334600 Sobic002G223300--Sobic002G334600 Sobic004G085300 Sobic004G085300 Sobic002G223300--Sobic004G085300 Sobic009G151200 Sobic009G151200 Sobic002G223300--Sobic009G151200 Sobic003G132700 Sobic003G132700 Sobic002G223300--Sobic003G132700 Sobic007G046900 Sobic007G046900 Sobic002G223300--Sobic007G046900 Sobic004G285000 Sobic004G285000 Sobic002G223300--Sobic004G285000 Sobic006G210200 Sobic006G210200 Sobic002G223300--Sobic006G210200 Sobic002G223300--Sobic002G050500 Sobic002G339800 Sobic002G339800 Sobic002G223300--Sobic002G339800 Sobic003G412100--Sobic003G244700 Sobic003G412100--Sobic002G334600 Sobic003G412100--Sobic010G235500 Sobic003G184400 Sobic003G184400 Sobic003G412100--Sobic003G184400 Sobic005G040900 Sobic005G040900 Sobic003G412100--Sobic005G040900 Sobic002G105000 Sobic002G105000 Sobic003G412100--Sobic002G105000 Sobic005G009200 Sobic005G009200 Sobic003G412100--Sobic005G009200 Sobic003G412100--Sobic002G362300 Sobic001G346700 Sobic001G346700 Sobic003G412100--Sobic001G346700 Sobic010G046400 Sobic010G046400 Sobic010G173900--Sobic010G046400 Sobic004G227500 Sobic004G227500 Sobic010G173900--Sobic004G227500 Sobic010G173900--Sobic002G334600 Sobic010G173900--Sobic001G045700 Sobic009G011500 Sobic009G011500 Sobic010G173900--Sobic009G011500 Sobic010G208500 Sobic010G208500 Sobic010G173900--Sobic010G208500 Sobic010G173900--Sobic002G050500 Sobic002G157200 Sobic002G157200 Sobic010G173900--Sobic002G157200 Sobic002G367300 Sobic002G367300 Sobic010G173900--Sobic002G367300 Sobic009G000400 Sobic009G000400 Sobic006G028700--Sobic009G000400 Sobic009G074700 Sobic009G074700 Sobic006G028700--Sobic009G074700 Sobic006G180700 Sobic006G180700 Sobic006G028700--Sobic006G180700 Sobic001G090300 Sobic001G090300 Sobic006G028700--Sobic001G090300 Sobic005G154700 Sobic005G154700 Sobic006G028700--Sobic005G154700 Sobic004G149800 Sobic004G149800 Sobic006G028700--Sobic004G149800 Sobic001G246500 Sobic001G246500 Sobic006G028700--Sobic001G246500 Sobic005G064700 Sobic005G064700 Sobic006G028700--Sobic005G064700 Sobic007G000400 Sobic007G000400 Sobic006G028700--Sobic007G000400 Sobic008G117200 Sobic008G117200 Sobic004G197900--Sobic008G117200 Sobic002G421700 Sobic002G421700 Sobic004G197900--Sobic002G421700 Sobic008G152900 Sobic008G152900 Sobic004G197900--Sobic008G152900 Sobic006G128800 Sobic006G128800 Sobic004G197900--Sobic006G128800 Sobic001G425000 Sobic001G425000 Sobic004G197900--Sobic001G425000 Sobic002G051450 Sobic002G051450 Sobic004G197900--Sobic002G051450 Sobic005G015100 Sobic005G015100 Sobic004G197900--Sobic005G015100 Sobic008G034600 Sobic008G034600 Sobic004G197900--Sobic008G034600 Sobic010G263800 Sobic010G263800 Sobic004G197900--Sobic010G263800 Sobic003G140900 Sobic003G140900 Sobic003G343600--Sobic003G140900 Sobic003G343600--Sobic002G223300 Sobic005G072400 Sobic005G072400 Sobic003G343600--Sobic005G072400 Sobic006G248500 Sobic006G248500 Sobic003G343600--Sobic006G248500 Sobic003G343600--Sobic004G285000 Sobic002G268900 Sobic002G268900 Sobic003G343600--Sobic002G268900 Sobic005G198200 Sobic005G198200 Sobic003G343600--Sobic005G198200 Sobic006G278200 Sobic006G278200 Sobic003G343600--Sobic006G278200 Sobic003G343600--Sobic004G085300 Sobic001G045700--Sobic002G157200 Sobic007G224900 Sobic007G224900 Sobic001G045700--Sobic007G224900 Sobic003G185250 Sobic003G185250 Sobic001G045700--Sobic003G185250 Sobic006G006500 Sobic006G006500 Sobic001G045700--Sobic006G006500 Sobic002G049000 Sobic002G049000 Sobic001G045700--Sobic002G049000 Sobic002G060450 Sobic002G060450 Sobic001G045700--Sobic002G060450 Sobic001G045700--Sobic002G050500 Sobic002G297800 Sobic002G297800 Sobic001G045700--Sobic002G297800 Sobic001G045700--Sobic010G208500 Sobic001G303675 Sobic001G303675 Sobic006G039900--Sobic001G303675 Sobic001G454301 Sobic001G454301 Sobic006G039900--Sobic001G454301 Sobic003G435600 Sobic003G435600 Sobic006G039900--Sobic003G435600 Sobic005G077400 Sobic005G077400 Sobic006G039900--Sobic005G077400 Sobic006G076300 Sobic006G076300 Sobic006G039900--Sobic006G076300 Sobic001G228700 Sobic001G228700 Sobic006G039900--Sobic001G228700 Sobic004G169501 Sobic004G169501 Sobic006G039900--Sobic004G169501 Sobic001G543900 Sobic001G543900 Sobic006G039900--Sobic001G543900 Sobic006G262200 Sobic006G262200 Sobic006G039900--Sobic006G262200
Octagon: transcription factors


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