Gene annotation
Transcriptome id Sobic.007G189200.1
Synonym Sb07g025890
Functional annotation "Candidate orthologue to the wheat Pm40 gene, Disease resistance RGA1" (PubMedID : 27755575)
CC-NBS-LRR, putative, expressed
UniProt C5YHN9 , H0I4B5
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF613
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14460 : LRR and NB-ARC domains-containing disease resistance protein
RAP-DB (Rice) LOC_Os08g43000.1 : CC-NBS-LRR, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ99235 , PNT68528
Barley HORVU7Hr1G026360.4 , HORVU7Hr1G026360.5 , HORVU7Hr1G026360.6 , HORVU7Hr1G026360.1 , HORVU7Hr1G026360.2 , HORVU7Hr1G026360.3
Wheat TraesCS7D02G122700 , TraesCS7B02G024900 , TraesCS3B02G497800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G246500 OTU-like cysteine protease family protein, putative, expressed -
2 Sobic.004G183800 AAA family ATPase, putative, expressed K03544: clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
3 Sobic.010G189200 pentatricopeptide, putative, expressed -
4 Sobic.003G410900 CRAL/TRIO domain containing protein, expressed -
5 Sobic.009G034600 expressed protein -
6 Sobic.003G162100 membrane associated DUF588 domain containing protein, putative, expressed -
7 Sobic.001G351400 Metacaspase 1("PubMedID : 26759170,PubMedID : 24597475")@ICE-like protease p20 domain containing protein, putative, expressed -
8 Sobic.004G189900 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed K13418: somatic embryogenesis receptor kinase 1
9 Sobic.010G269400 DNL zinc finger domain containing protein, putative, expressed -
10 Sobic.010G058200 sulfiredoxin-1, putative, expressed K12260: sulfiredoxin
11 Sobic.009G094800 sugar porter, putative, expressed -
12 Sobic.001G102300 homeobox domain containing protein, expressed -
13 Sobic.006G258700 Alternative oxidase family protein(PubMedID : 26465154)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
14 Sobic.001G404500 gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed K08059: IFI30, interferon, gamma-inducible protein 30
15 Sobic.003G007700 ethylene-responsive protein related, putative, expressed -
16 Sobic.005G175500 TKL_IRAK_DUF26-lc.25 - DUF26 kinases have homology to DUF26 containing loci, expressed -
17 Sobic.010G207500 homeobox protein knotted-1, putative, expressed -
18 Sobic.008G063200 expressed protein -
19 Sobic.003G343400 sufB/sufD domain containing protein, putative, expressed -
20 Sobic.003G014300 expressed protein -


Gene co-expression network
sample Sobic007G189200 Sobic007G189200 Sobic002G246500 Sobic002G246500 Sobic007G189200--Sobic002G246500 Sobic004G183800 Sobic004G183800 Sobic007G189200--Sobic004G183800 Sobic010G189200 Sobic010G189200 Sobic007G189200--Sobic010G189200 Sobic003G410900 Sobic003G410900 Sobic007G189200--Sobic003G410900 Sobic009G034600 Sobic009G034600 Sobic007G189200--Sobic009G034600 Sobic003G162100 Sobic003G162100 Sobic007G189200--Sobic003G162100 Sobic001G351400 Sobic001G351400 Sobic007G189200--Sobic001G351400 Sobic004G189900 Sobic004G189900 Sobic007G189200--Sobic004G189900 Sobic010G269400 Sobic010G269400 Sobic007G189200--Sobic010G269400 Sobic003G343400 Sobic003G343400 Sobic002G246500--Sobic003G343400 Sobic003G125400 Sobic003G125400 Sobic002G246500--Sobic003G125400 Sobic009G068300 Sobic009G068300 Sobic002G246500--Sobic009G068300 Sobic002G246500--Sobic010G189200 Sobic010G255100 Sobic010G255100 Sobic002G246500--Sobic010G255100 Sobic006G186600 Sobic006G186600 Sobic002G246500--Sobic006G186600 Sobic006G256600 Sobic006G256600 Sobic002G246500--Sobic006G256600 Sobic002G102200 Sobic002G102200 Sobic002G246500--Sobic002G102200 Sobic006G210400 Sobic006G210400 Sobic002G246500--Sobic006G210400 Sobic004G183800--Sobic010G189200 Sobic004G210900 Sobic004G210900 Sobic004G183800--Sobic004G210900 Sobic005G175500 Sobic005G175500 Sobic004G183800--Sobic005G175500 Sobic010G109600 Sobic010G109600 Sobic004G183800--Sobic010G109600 Sobic001G043800 Sobic001G043800 Sobic004G183800--Sobic001G043800 Sobic001G300100 Sobic001G300100 Sobic004G183800--Sobic001G300100 Sobic009G193500 Sobic009G193500 Sobic004G183800--Sobic009G193500 Sobic008G063200 Sobic008G063200 Sobic004G183800--Sobic008G063200 Sobic002G276100 Sobic002G276100 Sobic004G183800--Sobic002G276100 Sobic001G450600 Sobic001G450600 Sobic010G189200--Sobic001G450600 Sobic010G189200--Sobic008G063200 Sobic004G298900 Sobic004G298900 Sobic010G189200--Sobic004G298900 Sobic006G258700 Sobic006G258700 Sobic010G189200--Sobic006G258700 Sobic006G214700 Sobic006G214700 Sobic010G189200--Sobic006G214700 Sobic010G189200--Sobic004G183800 Sobic003G014300 Sobic003G014300 Sobic010G189200--Sobic003G014300 Sobic004G333400 Sobic004G333400 Sobic010G189200--Sobic004G333400 Sobic010G189200--Sobic002G102200 Sobic001G404500 Sobic001G404500 Sobic003G410900--Sobic001G404500 Sobic006G060800 Sobic006G060800 Sobic003G410900--Sobic006G060800 Sobic004G063200 Sobic004G063200 Sobic003G410900--Sobic004G063200 Sobic003G096500 Sobic003G096500 Sobic003G410900--Sobic003G096500 Sobic003G410900--Sobic001G351400 Sobic004G099700 Sobic004G099700 Sobic003G410900--Sobic004G099700 Sobic006G123500 Sobic006G123500 Sobic003G410900--Sobic006G123500 Sobic009G189000 Sobic009G189000 Sobic003G410900--Sobic009G189000 Sobic006G164300 Sobic006G164300 Sobic003G410900--Sobic006G164300 Sobic009G034600--Sobic008G063200 Sobic003G421400 Sobic003G421400 Sobic009G034600--Sobic003G421400 Sobic009G034600--Sobic010G269400 Sobic001G102300 Sobic001G102300 Sobic009G034600--Sobic001G102300 Sobic003G292600 Sobic003G292600 Sobic009G034600--Sobic003G292600 Sobic009G034600--Sobic006G258700 Sobic006G188000 Sobic006G188000 Sobic009G034600--Sobic006G188000 Sobic010G207500 Sobic010G207500 Sobic009G034600--Sobic010G207500 Sobic010G241300 Sobic010G241300 Sobic009G034600--Sobic010G241300 Sobic003G002600 Sobic003G002600 Sobic003G162100--Sobic003G002600 Sobic005G012200 Sobic005G012200 Sobic003G162100--Sobic005G012200 Sobic003G162100--Sobic003G343400 Sobic006G213500 Sobic006G213500 Sobic003G162100--Sobic006G213500 Sobic004G131900 Sobic004G131900 Sobic003G162100--Sobic004G131900 Sobic003G162100--Sobic001G351400 Sobic003G162100--Sobic006G258700 Sobic009G195000 Sobic009G195000 Sobic003G162100--Sobic009G195000 Sobic003G162100--Sobic007G189200 Sobic001G351400--Sobic006G258700 Sobic001G351400--Sobic009G189000 Sobic001G351400--Sobic001G102300 Sobic002G362100 Sobic002G362100 Sobic001G351400--Sobic002G362100 Sobic001G351400--Sobic010G207500 Sobic001G351400--Sobic001G404500 Sobic010G184600 Sobic010G184600 Sobic001G351400--Sobic010G184600 Sobic001G351400--Sobic003G410900 Sobic001G525900 Sobic001G525900 Sobic001G351400--Sobic001G525900 Sobic008G146900 Sobic008G146900 Sobic004G189900--Sobic008G146900 Sobic004G189900--Sobic010G207500 Sobic009G017400 Sobic009G017400 Sobic004G189900--Sobic009G017400 Sobic004G189900--Sobic010G184600 Sobic004G189900--Sobic004G183800 Sobic004G181700 Sobic004G181700 Sobic004G189900--Sobic004G181700 Sobic002G137000 Sobic002G137000 Sobic004G189900--Sobic002G137000 Sobic004G189900--Sobic001G351400 Sobic004G189900--Sobic003G014300 Sobic001G286600 Sobic001G286600 Sobic010G269400--Sobic001G286600 Sobic010G269400--Sobic006G258700 Sobic010G140600 Sobic010G140600 Sobic010G269400--Sobic010G140600 Sobic010G058200 Sobic010G058200 Sobic010G269400--Sobic010G058200 Sobic003G037300 Sobic003G037300 Sobic010G269400--Sobic003G037300 Sobic010G269400--Sobic003G014300 Sobic010G269400--Sobic002G102200 Sobic006G110900 Sobic006G110900 Sobic010G269400--Sobic006G110900 Sobic009G062400 Sobic009G062400 Sobic010G269400--Sobic009G062400
Octagon: transcription factors


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