Gene annotation
Transcriptome id Sobic.007G211400.1
Synonym Sb07g027860, DRT100
Functional annotation polygalacturonase inhibitor 2 precursor, putative, expressed
UniProt C5YIS8
Pfam PF08263 PF00560 PF13855
Panther DB PTHR27000 PTHR27000:SF151
NCBI CDD KOG4579; Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G12610 : Leucine-rich repeat (LRR) family protein
RAP-DB (Rice) LOC_Os08g39550.1 : polygalacturonase inhibitor 2 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a005083
Brachypodium -
Barley HORVU7Hr1G050110.1 , HORVU7Hr1G050140.1
Wheat -
Populus -


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cDNA sequences
Sobic.007G211400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G202100 expressed protein -
2 Sobic.002G394200 expressed protein K15711: SMARCA3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3
3 Sobic.002G430700 glycosyltransferase family 43 protein, putative, expressed -
4 Sobic.001G247000 MBTB51 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
5 Sobic.006G108000 formin, putative, expressed -
6 Sobic.003G282600 glycosyl transferase 8 domain containing protein, putative, expressed -
7 Sobic.004G326800 expressed protein -
8 Sobic.009G163700 fasciclin-like arabinogalactan protein, putative, expressed -
9 Sobic.009G195600 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
10 Sobic.010G255000 uncharacterized protein At4g06744 precursor, putative, expressed -
11 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
12 Sobic.003G411400 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
13 Sobic.004G012700 remorin family protein, putative, expressed -
14 Sobic.007G137101 R2R3 MYB transcription factor(PubMedID : 33633216) K09422: transcription factor MYB, plant
15 Sobic.001G183500 cysteine proteinase inhibitor precursor, putative, expressed -
16 Sobic.010G220800 zinc-binding protein, putative, expressed -
17 Sobic.006G155900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
18 Sobic.007G008300 WD domain, G-beta repeat domain containing protein, expressed K10751: chromatin assembly factor 1 subunit B
19 Sobic.007G017700 IQ calmodulin-binding motif domain containing protein, expressed -
20 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein


Gene co-expression network
sample Sobic007G211400 Sobic007G211400 Sobic010G202100 Sobic010G202100 Sobic007G211400--Sobic010G202100 Sobic002G394200 Sobic002G394200 Sobic007G211400--Sobic002G394200 Sobic002G430700 Sobic002G430700 Sobic007G211400--Sobic002G430700 Sobic001G247000 Sobic001G247000 Sobic007G211400--Sobic001G247000 Sobic006G108000 Sobic006G108000 Sobic007G211400--Sobic006G108000 Sobic003G282600 Sobic003G282600 Sobic007G211400--Sobic003G282600 Sobic004G326800 Sobic004G326800 Sobic007G211400--Sobic004G326800 Sobic009G163700 Sobic009G163700 Sobic007G211400--Sobic009G163700 Sobic009G195600 Sobic009G195600 Sobic007G211400--Sobic009G195600 Sobic010G215300 Sobic010G215300 Sobic010G202100--Sobic010G215300 Sobic010G234800 Sobic010G234800 Sobic010G202100--Sobic010G234800 Sobic001G098900 Sobic001G098900 Sobic010G202100--Sobic001G098900 Sobic007G017700 Sobic007G017700 Sobic010G202100--Sobic007G017700 Sobic003G414400 Sobic003G414400 Sobic010G202100--Sobic003G414400 Sobic009G025400 Sobic009G025400 Sobic010G202100--Sobic009G025400 Sobic003G047200 Sobic003G047200 Sobic010G202100--Sobic003G047200 Sobic006G201300 Sobic006G201300 Sobic010G202100--Sobic006G201300 Sobic008G114500 Sobic008G114500 Sobic010G202100--Sobic008G114500 Sobic002G394200--Sobic009G025400 Sobic004G108400 Sobic004G108400 Sobic002G394200--Sobic004G108400 Sobic002G420000 Sobic002G420000 Sobic002G394200--Sobic002G420000 Sobic007G008300 Sobic007G008300 Sobic002G394200--Sobic007G008300 Sobic009G257900 Sobic009G257900 Sobic002G394200--Sobic009G257900 Sobic001G295400 Sobic001G295400 Sobic002G394200--Sobic001G295400 Sobic001G494300 Sobic001G494300 Sobic002G394200--Sobic001G494300 Sobic006G112800 Sobic006G112800 Sobic002G394200--Sobic006G112800 Sobic005G056800 Sobic005G056800 Sobic002G394200--Sobic005G056800 Sobic006G107500 Sobic006G107500 Sobic002G430700--Sobic006G107500 Sobic003G085900 Sobic003G085900 Sobic002G430700--Sobic003G085900 Sobic006G163300 Sobic006G163300 Sobic002G430700--Sobic006G163300 Sobic002G360600 Sobic002G360600 Sobic002G430700--Sobic002G360600 Sobic010G070900 Sobic010G070900 Sobic002G430700--Sobic010G070900 Sobic003G090600 Sobic003G090600 Sobic002G430700--Sobic003G090600 Sobic003G046400 Sobic003G046400 Sobic002G430700--Sobic003G046400 Sobic007G147200 Sobic007G147200 Sobic002G430700--Sobic007G147200 Sobic010G014500 Sobic010G014500 Sobic002G430700--Sobic010G014500 Sobic002G340350 Sobic002G340350 Sobic001G247000--Sobic002G340350 Sobic006G163650 Sobic006G163650 Sobic001G247000--Sobic006G163650 Sobic001G247000--Sobic006G108000 Sobic001G247000--Sobic007G211400 Sobic004G059100 Sobic004G059100 Sobic001G247000--Sobic004G059100 Sobic001G247000--Sobic009G163700 Sobic001G247000--Sobic003G282600 Sobic003G377200 Sobic003G377200 Sobic001G247000--Sobic003G377200 Sobic003G040100 Sobic003G040100 Sobic001G247000--Sobic003G040100 Sobic003G406500 Sobic003G406500 Sobic006G108000--Sobic003G406500 Sobic001G331100 Sobic001G331100 Sobic006G108000--Sobic001G331100 Sobic004G115600 Sobic004G115600 Sobic006G108000--Sobic004G115600 Sobic008G163800 Sobic008G163800 Sobic006G108000--Sobic008G163800 Sobic006G245200 Sobic006G245200 Sobic006G108000--Sobic006G245200 Sobic002G221400 Sobic002G221400 Sobic006G108000--Sobic002G221400 Sobic009G254400 Sobic009G254400 Sobic006G108000--Sobic009G254400 Sobic006G108000--Sobic003G040100 Sobic007G153300 Sobic007G153300 Sobic006G108000--Sobic007G153300 Sobic007G019600 Sobic007G019600 Sobic003G282600--Sobic007G019600 Sobic002G035500 Sobic002G035500 Sobic003G282600--Sobic002G035500 Sobic004G237300 Sobic004G237300 Sobic003G282600--Sobic004G237300 Sobic001G474300 Sobic001G474300 Sobic003G282600--Sobic001G474300 Sobic003G282600--Sobic009G195600 Sobic003G282600--Sobic010G202100 Sobic001G496700 Sobic001G496700 Sobic003G282600--Sobic001G496700 Sobic007G162000 Sobic007G162000 Sobic003G282600--Sobic007G162000 Sobic003G282600--Sobic007G211400 Sobic004G229700 Sobic004G229700 Sobic004G326800--Sobic004G229700 Sobic003G319900 Sobic003G319900 Sobic004G326800--Sobic003G319900 Sobic001G183500 Sobic001G183500 Sobic004G326800--Sobic001G183500 Sobic005G062600 Sobic005G062600 Sobic004G326800--Sobic005G062600 Sobic005G168400 Sobic005G168400 Sobic004G326800--Sobic005G168400 Sobic001G079900 Sobic001G079900 Sobic004G326800--Sobic001G079900 Sobic001G384700 Sobic001G384700 Sobic004G326800--Sobic001G384700 Sobic003G035400 Sobic003G035400 Sobic004G326800--Sobic003G035400 Sobic006G232900 Sobic006G232900 Sobic004G326800--Sobic006G232900 Sobic009G163700--Sobic001G494300 Sobic009G163700--Sobic002G394200 Sobic009G163700--Sobic002G035500 Sobic006G155900 Sobic006G155900 Sobic009G163700--Sobic006G155900 Sobic009G163700--Sobic003G040100 Sobic009G163700--Sobic009G257900 Sobic009G163700--Sobic007G153300 Sobic009G163700--Sobic007G162000 Sobic009G163700--Sobic007G019600 Sobic009G195600--Sobic007G162000 Sobic009G195600--Sobic010G202100 Sobic006G176400 Sobic006G176400 Sobic009G195600--Sobic006G176400 Sobic009G195600--Sobic007G019600 Sobic009G195600--Sobic003G047200 Sobic009G195600--Sobic009G257900 Sobic002G202500 Sobic002G202500 Sobic009G195600--Sobic002G202500 Sobic003G373900 Sobic003G373900 Sobic009G195600--Sobic003G373900 Sobic009G195600--Sobic002G035500
Octagon: transcription factors


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