Gene annotation
Transcriptome id Sobic.008G009900.7,Sobic.008G009900.3,Sobic.008G009900.6,Sobic.008G009900.8,Sobic.008G009900.2,Sobic.008G009900.5
Synonym Sb08g000930
Functional annotation lipase-related, putative, expressed
UniProt A0A1B6PAM7 , C5YQ68
Pfam PF07819
Panther DB PTHR31934 PTHR31934:SF4 PTHR31934:SF4 PTHR31934
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006505; GPI anchor metabolic process GO:0006886intracellular protein transport GO:0016788hydrolase activity, acting on ester bonds GO:0016788hydrolase activity, acting on ester bonds GO:0006886intracellular protein transport GO:0006505GPI anchor metabolic process


Orthologs (automatic annotation)
TAIR AT2G44970 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os11g01875.2,LOC_Os11g01875.3,LOC_Os11g01875.1 : lipase-related, putative, expressed
MaizeGDB (Corn) Zm00025a028944
Brachypodium KQJ89629 , KQJ89628 , KQJ89627
Barley -
Wheat TraesCS4A02G180000 , TraesCS4D02G132500 , TraesCS4B02G137700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G178700 NBS-LRR disease resistance protein, putative, expressed -
2 Sobic.010G001500 AML1, putative, expressed -
3 Sobic.006G138400 regulatory subunit, putative, expressed -
4 Sobic.003G407300 histidine kinase, putative, expressed K14489: arabidopsis histidine kinase 2/3/4 (cytokinin receptor)
5 Sobic.004G052900 biotin--protein ligase, putative, expressed K01942: biotin---protein ligase
6 Sobic.004G355000 SAC9, putative, expressed -
7 Sobic.009G249200 transmembrane protein, putative, expressed -
8 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
9 Sobic.005G032800 splicing factor, putative, expressed K13109: IK, RED, IK cytokine
10 Sobic.001G137100 homeodomain protein, putative, expressed -
11 Sobic.001G373200 lipase precursor, putative, expressed -
12 Sobic.006G003400 expressed protein -
13 Sobic.005G209100 SCARECROW, putative, expressed -
14 Sobic.001G292200 dynamin family protein, putative, expressed -
15 Sobic.001G224600 peroxisome assembly protein 12, putative, expressed K13345: PEX12, peroxin-12
16 Sobic.003G019100 KIN, antigenic determinant of recA protein, putative, expressed K13102: DNA/RNA-binding protein KIN17
17 Sobic.006G214500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lecithine cholesterol acyltransferase, putative, expressed -
18 Sobic.007G172400 AAA-type ATPase family protein, putative, expressed K13338: peroxin-1
19 Sobic.009G121100 expressed protein -
20 Sobic.001G474600 calmodulin-binding transcription activator, putative, expressed -


Gene co-expression network
sample Sobic008G009900 Sobic008G009900 Sobic001G178700 Sobic001G178700 Sobic008G009900--Sobic001G178700 Sobic010G001500 Sobic010G001500 Sobic008G009900--Sobic010G001500 Sobic006G138400 Sobic006G138400 Sobic008G009900--Sobic006G138400 Sobic003G407300 Sobic003G407300 Sobic008G009900--Sobic003G407300 Sobic004G052900 Sobic004G052900 Sobic008G009900--Sobic004G052900 Sobic004G355000 Sobic004G355000 Sobic008G009900--Sobic004G355000 Sobic009G249200 Sobic009G249200 Sobic008G009900--Sobic009G249200 Sobic007G024700 Sobic007G024700 Sobic008G009900--Sobic007G024700 Sobic005G032800 Sobic005G032800 Sobic008G009900--Sobic005G032800 Sobic004G113400 Sobic004G113400 Sobic001G178700--Sobic004G113400 Sobic009G010600 Sobic009G010600 Sobic001G178700--Sobic009G010600 Sobic001G248300 Sobic001G248300 Sobic001G178700--Sobic001G248300 Sobic001G291000 Sobic001G291000 Sobic001G178700--Sobic001G291000 Sobic001G474600 Sobic001G474600 Sobic001G178700--Sobic001G474600 Sobic001G146800 Sobic001G146800 Sobic001G178700--Sobic001G146800 Sobic010G112000 Sobic010G112000 Sobic001G178700--Sobic010G112000 Sobic007G172400 Sobic007G172400 Sobic001G178700--Sobic007G172400 Sobic004G329400 Sobic004G329400 Sobic001G178700--Sobic004G329400 Sobic003G322700 Sobic003G322700 Sobic010G001500--Sobic003G322700 Sobic010G001500--Sobic007G024700 Sobic010G001500--Sobic004G355000 Sobic006G204900 Sobic006G204900 Sobic010G001500--Sobic006G204900 Sobic010G224000 Sobic010G224000 Sobic010G001500--Sobic010G224000 Sobic002G419800 Sobic002G419800 Sobic010G001500--Sobic002G419800 Sobic001G207400 Sobic001G207400 Sobic010G001500--Sobic001G207400 Sobic010G001500--Sobic001G178700 Sobic010G001500--Sobic001G146800 Sobic006G214500 Sobic006G214500 Sobic006G138400--Sobic006G214500 Sobic003G408500 Sobic003G408500 Sobic006G138400--Sobic003G408500 Sobic009G121100 Sobic009G121100 Sobic006G138400--Sobic009G121100 Sobic002G046800 Sobic002G046800 Sobic006G138400--Sobic002G046800 Sobic006G138400--Sobic003G407300 Sobic006G138400--Sobic010G001500 Sobic006G138400--Sobic008G009900 Sobic006G138400--Sobic007G024700 Sobic003G005800 Sobic003G005800 Sobic006G138400--Sobic003G005800 Sobic003G407300--Sobic009G121100 Sobic001G373200 Sobic001G373200 Sobic003G407300--Sobic001G373200 Sobic003G019100 Sobic003G019100 Sobic003G407300--Sobic003G019100 Sobic003G407300--Sobic006G214500 Sobic001G507300 Sobic001G507300 Sobic003G407300--Sobic001G507300 Sobic004G295800 Sobic004G295800 Sobic003G407300--Sobic004G295800 Sobic009G229800 Sobic009G229800 Sobic003G407300--Sobic009G229800 Sobic002G303000 Sobic002G303000 Sobic003G407300--Sobic002G303000 Sobic003G407300--Sobic007G024700 Sobic003G109100 Sobic003G109100 Sobic004G052900--Sobic003G109100 Sobic004G052900--Sobic007G024700 Sobic003G100800 Sobic003G100800 Sobic004G052900--Sobic003G100800 Sobic004G052900--Sobic007G172400 Sobic002G340100 Sobic002G340100 Sobic004G052900--Sobic002G340100 Sobic004G052900--Sobic002G419800 Sobic006G245400 Sobic006G245400 Sobic004G052900--Sobic006G245400 Sobic004G052900--Sobic001G248300 Sobic009G094300 Sobic009G094300 Sobic004G052900--Sobic009G094300 Sobic004G355000--Sobic001G207400 Sobic002G430000 Sobic002G430000 Sobic004G355000--Sobic002G430000 Sobic004G355000--Sobic001G248300 Sobic005G001000 Sobic005G001000 Sobic004G355000--Sobic005G001000 Sobic004G355000--Sobic004G329400 Sobic005G157000 Sobic005G157000 Sobic004G355000--Sobic005G157000 Sobic004G355000--Sobic003G322700 Sobic004G355000--Sobic004G113400 Sobic004G355000--Sobic009G010600 Sobic009G249200--Sobic007G024700 Sobic001G409600 Sobic001G409600 Sobic009G249200--Sobic001G409600 Sobic006G237400 Sobic006G237400 Sobic009G249200--Sobic006G237400 Sobic009G166300 Sobic009G166300 Sobic009G249200--Sobic009G166300 Sobic004G021100 Sobic004G021100 Sobic009G249200--Sobic004G021100 Sobic010G205800 Sobic010G205800 Sobic009G249200--Sobic010G205800 Sobic009G249200--Sobic003G408500 Sobic002G315200 Sobic002G315200 Sobic009G249200--Sobic002G315200 Sobic009G027300 Sobic009G027300 Sobic009G249200--Sobic009G027300 Sobic002G270500 Sobic002G270500 Sobic007G024700--Sobic002G270500 Sobic007G024700--Sobic009G094300 Sobic007G024700--Sobic009G249200 Sobic007G024700--Sobic004G052900 Sobic001G270400 Sobic001G270400 Sobic007G024700--Sobic001G270400 Sobic004G264400 Sobic004G264400 Sobic007G024700--Sobic004G264400 Sobic003G305200 Sobic003G305200 Sobic007G024700--Sobic003G305200 Sobic002G132000 Sobic002G132000 Sobic007G024700--Sobic002G132000 Sobic007G024700--Sobic002G419800 Sobic003G280800 Sobic003G280800 Sobic005G032800--Sobic003G280800 Sobic005G032800--Sobic001G474600 Sobic002G173000 Sobic002G173000 Sobic005G032800--Sobic002G173000 Sobic006G021250 Sobic006G021250 Sobic005G032800--Sobic006G021250 Sobic002G134200 Sobic002G134200 Sobic005G032800--Sobic002G134200 Sobic002G169633 Sobic002G169633 Sobic005G032800--Sobic002G169633 Sobic001G498600 Sobic001G498600 Sobic005G032800--Sobic001G498600 Sobic005G032800--Sobic010G112000 Sobic001G292200 Sobic001G292200 Sobic005G032800--Sobic001G292200
Octagon: transcription factors


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