Gene annotation
Transcriptome id Sobic.008G010100.1
Synonym Sb08g000945
Functional annotation OsFBX184 - F-box domain containing protein, expressed
UniProt A0A1B6PB58
Pfam PF00646
Panther DB PTHR32212 PTHR32212:SF122
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G61330 : FBD, F-box and Leucine Rich Repeat domains containing protein
RAP-DB (Rice) LOC_Os06g04690.1 : OsFBX184 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS5A02G275200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G241700 PPR repeat domain containing protein, putative, expressed -
2 Sobic.002G198200 expressed protein K03128: transcription initiation factor TFIID subunit 2
3 Sobic.005G205200 - -
4 Sobic.001G316700 amine oxidase, putative, expressed -
5 Sobic.004G240500 tyrosyl-tRNA synthetase, putative, expressed K01866: YARS, tyrosyl-tRNA synthetase
6 Sobic.001G056900 - -
7 Sobic.006G234601 - -
8 Sobic.003G028800 Protein of unknown function (DUF1677)(PubMedID : 26465154)@Protein of unknown function (DUF1677)(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.001G092200 - K17675: SUPV3L1, ATP-dependent RNA helicase SUPV3L1/SUV3
10 Sobic.005G208200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
11 Sobic.006G248700 AAA-type ATPase family protein, putative, expressed -
12 Sobic.003G348000 SAC3/GANP family protein, putative, expressed -
13 Sobic.008G050100 SAP domain containing protein, expressed -
14 Sobic.001G362601 - -
15 Sobic.001G214800 - K12824: TCERG1, transcription elongation regulator 1
16 Sobic.005G223600 stripe rust resistance protein Yr10, putative, expressed -
17 Sobic.009G231800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf"(PubMedID : 20499123)@auxin response factor 15, putative, expressed K14486: K14486, auxin response factor
18 Sobic.008G060500 receptor-like protein kinase 2 precursor, putative, expressed -
19 Sobic.006G065100 ERD1 protein, chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
20 Sobic.009G125600 NLI interacting factor-like phosphatase, putative, expressed K18999: RNA polymerase II C-terminal domain phosphatase-like 3/4


Gene co-expression network
sample Sobic008G010100 Sobic008G010100 Sobic004G241700 Sobic004G241700 Sobic008G010100--Sobic004G241700 Sobic002G198200 Sobic002G198200 Sobic008G010100--Sobic002G198200 Sobic005G205200 Sobic005G205200 Sobic008G010100--Sobic005G205200 Sobic001G316700 Sobic001G316700 Sobic008G010100--Sobic001G316700 Sobic004G240500 Sobic004G240500 Sobic008G010100--Sobic004G240500 Sobic001G056900 Sobic001G056900 Sobic008G010100--Sobic001G056900 Sobic006G234601 Sobic006G234601 Sobic008G010100--Sobic006G234601 Sobic003G028800 Sobic003G028800 Sobic008G010100--Sobic003G028800 Sobic001G092200 Sobic001G092200 Sobic008G010100--Sobic001G092200 Sobic009G024300 Sobic009G024300 Sobic004G241700--Sobic009G024300 Sobic004G123300 Sobic004G123300 Sobic004G241700--Sobic004G123300 Sobic004G241700--Sobic008G010100 Sobic002G258600 Sobic002G258600 Sobic004G241700--Sobic002G258600 Sobic001G461700 Sobic001G461700 Sobic004G241700--Sobic001G461700 Sobic007G224100 Sobic007G224100 Sobic004G241700--Sobic007G224100 Sobic001G486500 Sobic001G486500 Sobic004G241700--Sobic001G486500 Sobic007G123600 Sobic007G123600 Sobic004G241700--Sobic007G123600 Sobic002G118200 Sobic002G118200 Sobic004G241700--Sobic002G118200 Sobic001G298900 Sobic001G298900 Sobic002G198200--Sobic001G298900 Sobic007G111400 Sobic007G111400 Sobic002G198200--Sobic007G111400 Sobic003G155100 Sobic003G155100 Sobic002G198200--Sobic003G155100 Sobic006G219600 Sobic006G219600 Sobic002G198200--Sobic006G219600 Sobic004G178500 Sobic004G178500 Sobic002G198200--Sobic004G178500 Sobic003G388100 Sobic003G388100 Sobic002G198200--Sobic003G388100 Sobic006G065100 Sobic006G065100 Sobic002G198200--Sobic006G065100 Sobic002G345700 Sobic002G345700 Sobic002G198200--Sobic002G345700 Sobic005G142800 Sobic005G142800 Sobic002G198200--Sobic005G142800 Sobic005G208200 Sobic005G208200 Sobic005G205200--Sobic005G208200 Sobic005G223600 Sobic005G223600 Sobic005G205200--Sobic005G223600 Sobic005G223925 Sobic005G223925 Sobic005G205200--Sobic005G223925 Sobic010G024200 Sobic010G024200 Sobic005G205200--Sobic010G024200 Sobic005G221900 Sobic005G221900 Sobic005G205200--Sobic005G221900 Sobic008G003800 Sobic008G003800 Sobic005G205200--Sobic008G003800 Sobic006G036700 Sobic006G036700 Sobic005G205200--Sobic006G036700 Sobic003G348000 Sobic003G348000 Sobic005G205200--Sobic003G348000 Sobic010G060800 Sobic010G060800 Sobic005G205200--Sobic010G060800 Sobic003G037900 Sobic003G037900 Sobic001G316700--Sobic003G037900 Sobic006G248700 Sobic006G248700 Sobic001G316700--Sobic006G248700 Sobic007G050400 Sobic007G050400 Sobic001G316700--Sobic007G050400 Sobic010G269500 Sobic010G269500 Sobic001G316700--Sobic010G269500 Sobic005G012400 Sobic005G012400 Sobic001G316700--Sobic005G012400 Sobic003G284500 Sobic003G284500 Sobic001G316700--Sobic003G284500 Sobic002G422200 Sobic002G422200 Sobic001G316700--Sobic002G422200 Sobic003G176900 Sobic003G176900 Sobic001G316700--Sobic003G176900 Sobic005G076650 Sobic005G076650 Sobic001G316700--Sobic005G076650 Sobic009G079500 Sobic009G079500 Sobic004G240500--Sobic009G079500 Sobic003G252200 Sobic003G252200 Sobic004G240500--Sobic003G252200 Sobic002G411600 Sobic002G411600 Sobic004G240500--Sobic002G411600 Sobic001G536400 Sobic001G536400 Sobic004G240500--Sobic001G536400 Sobic002G008900 Sobic002G008900 Sobic004G240500--Sobic002G008900 Sobic002G034100 Sobic002G034100 Sobic004G240500--Sobic002G034100 Sobic005G001000 Sobic005G001000 Sobic004G240500--Sobic005G001000 Sobic005G110300 Sobic005G110300 Sobic004G240500--Sobic005G110300 Sobic009G191000 Sobic009G191000 Sobic004G240500--Sobic009G191000 Sobic001G056900--Sobic002G198200 Sobic003G057233 Sobic003G057233 Sobic001G056900--Sobic003G057233 Sobic001G516901 Sobic001G516901 Sobic001G056900--Sobic001G516901 Sobic001G220000 Sobic001G220000 Sobic001G056900--Sobic001G220000 Sobic007G023200 Sobic007G023200 Sobic001G056900--Sobic007G023200 Sobic007G010800 Sobic007G010800 Sobic001G056900--Sobic007G010800 Sobic004G178100 Sobic004G178100 Sobic001G056900--Sobic004G178100 Sobic009G103000 Sobic009G103000 Sobic001G056900--Sobic009G103000 Sobic001G169900 Sobic001G169900 Sobic001G056900--Sobic001G169900 Sobic006G234601--Sobic007G111400 Sobic002G124600 Sobic002G124600 Sobic006G234601--Sobic002G124600 Sobic006G234601--Sobic003G057233 Sobic002G379750 Sobic002G379750 Sobic006G234601--Sobic002G379750 Sobic006G050700 Sobic006G050700 Sobic006G234601--Sobic006G050700 Sobic006G234601--Sobic003G155100 Sobic006G133900 Sobic006G133900 Sobic006G234601--Sobic006G133900 Sobic001G534700 Sobic001G534700 Sobic006G234601--Sobic001G534700 Sobic010G132600 Sobic010G132600 Sobic006G234601--Sobic010G132600 Sobic006G123700 Sobic006G123700 Sobic003G028800--Sobic006G123700 Sobic003G028800--Sobic002G422200 Sobic008G050100 Sobic008G050100 Sobic003G028800--Sobic008G050100 Sobic002G101800 Sobic002G101800 Sobic003G028800--Sobic002G101800 Sobic003G173032 Sobic003G173032 Sobic003G028800--Sobic003G173032 Sobic008G023000 Sobic008G023000 Sobic003G028800--Sobic008G023000 Sobic008G002100 Sobic008G002100 Sobic003G028800--Sobic008G002100 Sobic001G527400 Sobic001G527400 Sobic003G028800--Sobic001G527400 Sobic007G183000 Sobic007G183000 Sobic003G028800--Sobic007G183000 Sobic001G374000 Sobic001G374000 Sobic001G092200--Sobic001G374000 Sobic001G125500 Sobic001G125500 Sobic001G092200--Sobic001G125500 Sobic010G254900 Sobic010G254900 Sobic001G092200--Sobic010G254900 Sobic010G080550 Sobic010G080550 Sobic001G092200--Sobic010G080550 Sobic001G373800 Sobic001G373800 Sobic001G092200--Sobic001G373800 Sobic002G363800 Sobic002G363800 Sobic001G092200--Sobic002G363800 Sobic006G106300 Sobic006G106300 Sobic001G092200--Sobic006G106300 Sobic005G076301 Sobic005G076301 Sobic001G092200--Sobic005G076301 Sobic003G143800 Sobic003G143800 Sobic001G092200--Sobic003G143800
Octagon: transcription factors


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