Gene annotation
Transcriptome id Sobic.001G056900.1
Synonym
Functional annotation -
UniProt A0A1B6QHG8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G198200 expressed protein K03128: transcription initiation factor TFIID subunit 2
2 Sobic.003G057233 - -
3 Sobic.001G516901 - -
4 Sobic.001G220000 PPR repeat containing protein, expressed -
5 Sobic.007G023200 OsFBX178 - F-box domain containing protein, expressed -
6 Sobic.007G010800 similar to Os01g0104100 protein(PubMedID : 29862293)@expressed protein -
7 Sobic.004G178100 uncharacterized oxidoreductase yoxD, putative, expressed -
8 Sobic.009G103000 ubiquitin family protein, putative, expressed -
9 Sobic.001G169900 seed maturation protein PM23, putative, expressed -
10 Sobic.003G003450 - K01177: beta-amylase
11 Sobic.006G232600 amine oxidase, flavin-containing, domain containing protein, expressed K02293: PDS, 15-cis-phytoene desaturase
12 Sobic.007G162600 uncharacterized protein all1601, putative, expressed K18010: 7-hydroxymethyl chlorophyll a reductase
13 Sobic.001G394800 tetratricopeptide repeat domain containing protein, expressed -
14 Sobic.001G161800 F-box/LRR domain containing protein, putative, expressed -
15 Sobic.001G198100 PAP fibrillin family domain containing protein, expressed -
16 Sobic.010G132600 selenoprotein O, putative, expressed -
17 Sobic.005G132000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed -
18 Sobic.002G000600 glycosyl transferase, group 1 domain containing protein, expressed K06119: sulfoquinovosyltransferase
19 Sobic.002G257750 - -
20 Sobic.004G300100 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein


Gene co-expression network
sample Sobic001G056900 Sobic001G056900 Sobic002G198200 Sobic002G198200 Sobic001G056900--Sobic002G198200 Sobic003G057233 Sobic003G057233 Sobic001G056900--Sobic003G057233 Sobic001G516901 Sobic001G516901 Sobic001G056900--Sobic001G516901 Sobic001G220000 Sobic001G220000 Sobic001G056900--Sobic001G220000 Sobic007G023200 Sobic007G023200 Sobic001G056900--Sobic007G023200 Sobic007G010800 Sobic007G010800 Sobic001G056900--Sobic007G010800 Sobic004G178100 Sobic004G178100 Sobic001G056900--Sobic004G178100 Sobic009G103000 Sobic009G103000 Sobic001G056900--Sobic009G103000 Sobic001G169900 Sobic001G169900 Sobic001G056900--Sobic001G169900 Sobic001G298900 Sobic001G298900 Sobic002G198200--Sobic001G298900 Sobic007G111400 Sobic007G111400 Sobic002G198200--Sobic007G111400 Sobic003G155100 Sobic003G155100 Sobic002G198200--Sobic003G155100 Sobic006G219600 Sobic006G219600 Sobic002G198200--Sobic006G219600 Sobic004G178500 Sobic004G178500 Sobic002G198200--Sobic004G178500 Sobic003G388100 Sobic003G388100 Sobic002G198200--Sobic003G388100 Sobic006G065100 Sobic006G065100 Sobic002G198200--Sobic006G065100 Sobic002G345700 Sobic002G345700 Sobic002G198200--Sobic002G345700 Sobic005G142800 Sobic005G142800 Sobic002G198200--Sobic005G142800 Sobic001G394800 Sobic001G394800 Sobic003G057233--Sobic001G394800 Sobic003G057233--Sobic001G169900 Sobic001G198100 Sobic001G198100 Sobic003G057233--Sobic001G198100 Sobic003G017100 Sobic003G017100 Sobic003G057233--Sobic003G017100 Sobic004G258700 Sobic004G258700 Sobic003G057233--Sobic004G258700 Sobic010G248700 Sobic010G248700 Sobic003G057233--Sobic010G248700 Sobic010G132600 Sobic010G132600 Sobic003G057233--Sobic010G132600 Sobic010G002700 Sobic010G002700 Sobic003G057233--Sobic010G002700 Sobic006G219150 Sobic006G219150 Sobic003G057233--Sobic006G219150 Sobic001G500600 Sobic001G500600 Sobic001G516901--Sobic001G500600 Sobic006G197300 Sobic006G197300 Sobic001G516901--Sobic006G197300 Sobic004G336200 Sobic004G336200 Sobic001G516901--Sobic004G336200 Sobic002G043600 Sobic002G043600 Sobic001G516901--Sobic002G043600 Sobic009G024300 Sobic009G024300 Sobic001G516901--Sobic009G024300 Sobic010G035400 Sobic010G035400 Sobic001G516901--Sobic010G035400 Sobic004G238200 Sobic004G238200 Sobic001G516901--Sobic004G238200 Sobic002G258600 Sobic002G258600 Sobic001G516901--Sobic002G258600 Sobic003G160800 Sobic003G160800 Sobic001G516901--Sobic003G160800 Sobic004G124400 Sobic004G124400 Sobic001G220000--Sobic004G124400 Sobic004G317700 Sobic004G317700 Sobic001G220000--Sobic004G317700 Sobic004G300100 Sobic004G300100 Sobic001G220000--Sobic004G300100 Sobic006G108200 Sobic006G108200 Sobic001G220000--Sobic006G108200 Sobic002G356900 Sobic002G356900 Sobic001G220000--Sobic002G356900 Sobic010G231500 Sobic010G231500 Sobic001G220000--Sobic010G231500 Sobic001G436400 Sobic001G436400 Sobic001G220000--Sobic001G436400 Sobic004G154800 Sobic004G154800 Sobic001G220000--Sobic004G154800 Sobic002G351600 Sobic002G351600 Sobic001G220000--Sobic002G351600 Sobic007G023200--Sobic004G238200 Sobic003G217700 Sobic003G217700 Sobic007G023200--Sobic003G217700 Sobic004G163800 Sobic004G163800 Sobic007G023200--Sobic004G163800 Sobic003G234900 Sobic003G234900 Sobic007G023200--Sobic003G234900 Sobic002G168300 Sobic002G168300 Sobic007G023200--Sobic002G168300 Sobic005G059800 Sobic005G059800 Sobic007G023200--Sobic005G059800 Sobic007G185700 Sobic007G185700 Sobic007G023200--Sobic007G185700 Sobic008G062400 Sobic008G062400 Sobic007G023200--Sobic008G062400 Sobic010G176550 Sobic010G176550 Sobic007G023200--Sobic010G176550 Sobic007G010800--Sobic002G356900 Sobic001G018000 Sobic001G018000 Sobic007G010800--Sobic001G018000 Sobic010G100900 Sobic010G100900 Sobic007G010800--Sobic010G100900 Sobic009G040400 Sobic009G040400 Sobic007G010800--Sobic009G040400 Sobic002G351200 Sobic002G351200 Sobic007G010800--Sobic002G351200 Sobic003G003450 Sobic003G003450 Sobic007G010800--Sobic003G003450 Sobic004G268400 Sobic004G268400 Sobic007G010800--Sobic004G268400 Sobic007G010800--Sobic004G317700 Sobic003G186800 Sobic003G186800 Sobic007G010800--Sobic003G186800 Sobic002G000600 Sobic002G000600 Sobic004G178100--Sobic002G000600 Sobic002G020400 Sobic002G020400 Sobic004G178100--Sobic002G020400 Sobic010G043800 Sobic010G043800 Sobic004G178100--Sobic010G043800 Sobic006G173600 Sobic006G173600 Sobic004G178100--Sobic006G173600 Sobic006G158100 Sobic006G158100 Sobic004G178100--Sobic006G158100 Sobic004G178100--Sobic001G198100 Sobic003G247400 Sobic003G247400 Sobic004G178100--Sobic003G247400 Sobic004G337400 Sobic004G337400 Sobic004G178100--Sobic004G337400 Sobic004G178100--Sobic001G516901 Sobic007G087100 Sobic007G087100 Sobic009G103000--Sobic007G087100 Sobic001G077300 Sobic001G077300 Sobic009G103000--Sobic001G077300 Sobic009G170200 Sobic009G170200 Sobic009G103000--Sobic009G170200 Sobic009G073900 Sobic009G073900 Sobic009G103000--Sobic009G073900 Sobic009G103000--Sobic003G003450 Sobic006G232600 Sobic006G232600 Sobic009G103000--Sobic006G232600 Sobic006G213700 Sobic006G213700 Sobic009G103000--Sobic006G213700 Sobic001G378100 Sobic001G378100 Sobic009G103000--Sobic001G378100 Sobic006G212800 Sobic006G212800 Sobic009G103000--Sobic006G212800 Sobic001G169900--Sobic010G002700 Sobic001G169900--Sobic006G158100 Sobic001G169900--Sobic010G043800 Sobic007G136200 Sobic007G136200 Sobic001G169900--Sobic007G136200 Sobic001G169900--Sobic001G198100 Sobic006G142600 Sobic006G142600 Sobic001G169900--Sobic006G142600 Sobic001G169900--Sobic001G394800 Sobic001G017300 Sobic001G017300 Sobic001G169900--Sobic001G017300 Sobic001G169900--Sobic003G017100
Octagon: transcription factors


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