Gene annotation
Transcriptome id Sobic.008G119250.1
Synonym -
Functional annotation -
UniProt A0A1Z5R6A2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G183100 pentatricopeptide repeat domain containing protein, putative, expressed -
2 Sobic.008G119300 - -
3 Sobic.007G113600 adenylate kinase family protein(PubMedID : 26465154)@AMP kinase(PubMedID : 26976818)@adenylate kinase family protein, putative, expressed K00939: adk, adenylate kinase
4 Sobic.002G267900 expressed protein -
5 Sobic.002G274200 expressed protein -
6 Sobic.008G172700 OsDegp15 - Putative Deg protease homologue, expressed -
7 Sobic.001G201900 folylpolyglutamate synthetase, putative, expressed K01930: folylpolyglutamate synthase
8 Sobic.009G183700 XP_002441313.1 plastidic phosphoglycerate kinase(PubMedID : 26904072)@phosphoglycerate kinase(PubMedID : 29017446)@phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
9 Sobic.010G005500 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
10 Sobic.001G283700 acyltransferase, putative, expressed K00630: glycerol-3-phosphate O-acyltransferase
11 Sobic.009G140600 hydrolase, alpha/beta fold family domain containing protein, expressed -
12 Sobic.001G308800 expressed protein K18065: Cdc25 family phosphatase
13 Sobic.003G148200 RNA recognition motif containing protein, putative, expressed -
14 Sobic.004G012900 expressed protein -
15 Sobic.003G002300 Glucose-6-phosphate/phosphate translocator-related(PubMedID : 26465154)@-(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@DUF250 domain containing protein, putative, expressed K15283: solute carrier family 35, member E1
16 Sobic.007G052400 rubredoxin family protein, putative, expressed -
17 Sobic.003G378600 "oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor"(PubMedID : 26465154)@NADH dehydrogenase I subunit N, putative, expressed -
18 Sobic.010G277600 - -
19 Sobic.001G029100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.002G277100 -(PubMedID : 29017446)@triosephosphate isomerase, chloroplast precursor, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)


Gene co-expression network
sample Sobic008G119250 Sobic008G119250 Sobic004G183100 Sobic004G183100 Sobic008G119250--Sobic004G183100 Sobic008G119300 Sobic008G119300 Sobic008G119250--Sobic008G119300 Sobic007G113600 Sobic007G113600 Sobic008G119250--Sobic007G113600 Sobic002G267900 Sobic002G267900 Sobic008G119250--Sobic002G267900 Sobic002G274200 Sobic002G274200 Sobic008G119250--Sobic002G274200 Sobic008G172700 Sobic008G172700 Sobic008G119250--Sobic008G172700 Sobic001G201900 Sobic001G201900 Sobic008G119250--Sobic001G201900 Sobic009G183700 Sobic009G183700 Sobic008G119250--Sobic009G183700 Sobic010G005500 Sobic010G005500 Sobic008G119250--Sobic010G005500 Sobic004G183100--Sobic008G119250 Sobic004G311100 Sobic004G311100 Sobic004G183100--Sobic004G311100 Sobic002G198600 Sobic002G198600 Sobic004G183100--Sobic002G198600 Sobic009G030900 Sobic009G030900 Sobic004G183100--Sobic009G030900 Sobic001G029100 Sobic001G029100 Sobic004G183100--Sobic001G029100 Sobic003G222500 Sobic003G222500 Sobic004G183100--Sobic003G222500 Sobic001G308800 Sobic001G308800 Sobic004G183100--Sobic001G308800 Sobic001G104800 Sobic001G104800 Sobic004G183100--Sobic001G104800 Sobic004G183100--Sobic009G183700 Sobic008G119300--Sobic002G267900 Sobic001G175700 Sobic001G175700 Sobic008G119300--Sobic001G175700 Sobic009G131800 Sobic009G131800 Sobic008G119300--Sobic009G131800 Sobic002G271700 Sobic002G271700 Sobic008G119300--Sobic002G271700 Sobic008G119300--Sobic008G172700 Sobic006G050400 Sobic006G050400 Sobic008G119300--Sobic006G050400 Sobic008G119300--Sobic008G119250 Sobic004G012900 Sobic004G012900 Sobic008G119300--Sobic004G012900 Sobic002G272100 Sobic002G272100 Sobic008G119300--Sobic002G272100 Sobic001G167900 Sobic001G167900 Sobic007G113600--Sobic001G167900 Sobic004G124400 Sobic004G124400 Sobic007G113600--Sobic004G124400 Sobic002G351600 Sobic002G351600 Sobic007G113600--Sobic002G351600 Sobic002G407000 Sobic002G407000 Sobic007G113600--Sobic002G407000 Sobic002G061900 Sobic002G061900 Sobic007G113600--Sobic002G061900 Sobic001G436400 Sobic001G436400 Sobic007G113600--Sobic001G436400 Sobic008G050400 Sobic008G050400 Sobic007G113600--Sobic008G050400 Sobic004G359600 Sobic004G359600 Sobic007G113600--Sobic004G359600 Sobic007G130400 Sobic007G130400 Sobic007G113600--Sobic007G130400 Sobic002G267900--Sobic008G172700 Sobic004G055000 Sobic004G055000 Sobic002G267900--Sobic004G055000 Sobic002G267900--Sobic002G272100 Sobic010G277600 Sobic010G277600 Sobic002G267900--Sobic010G277600 Sobic002G267900--Sobic009G183700 Sobic004G326500 Sobic004G326500 Sobic002G267900--Sobic004G326500 Sobic002G401800 Sobic002G401800 Sobic002G267900--Sobic002G401800 Sobic002G267900--Sobic008G119300 Sobic002G198000 Sobic002G198000 Sobic002G267900--Sobic002G198000 Sobic005G110400 Sobic005G110400 Sobic002G274200--Sobic005G110400 Sobic002G274200--Sobic002G272100 Sobic006G021600 Sobic006G021600 Sobic002G274200--Sobic006G021600 Sobic008G073100 Sobic008G073100 Sobic002G274200--Sobic008G073100 Sobic002G405100 Sobic002G405100 Sobic002G274200--Sobic002G405100 Sobic003G077400 Sobic003G077400 Sobic002G274200--Sobic003G077400 Sobic001G368500 Sobic001G368500 Sobic002G274200--Sobic001G368500 Sobic005G143500 Sobic005G143500 Sobic002G274200--Sobic005G143500 Sobic002G274200--Sobic002G401800 Sobic008G172700--Sobic002G267900 Sobic001G350000 Sobic001G350000 Sobic008G172700--Sobic001G350000 Sobic004G239100 Sobic004G239100 Sobic008G172700--Sobic004G239100 Sobic008G172700--Sobic004G055000 Sobic003G378600 Sobic003G378600 Sobic008G172700--Sobic003G378600 Sobic008G172700--Sobic010G277600 Sobic008G172700--Sobic009G183700 Sobic008G171300 Sobic008G171300 Sobic008G172700--Sobic008G171300 Sobic008G172700--Sobic004G359600 Sobic001G201900--Sobic002G407000 Sobic001G201900--Sobic008G119250 Sobic001G201900--Sobic007G113600 Sobic001G178100 Sobic001G178100 Sobic001G201900--Sobic001G178100 Sobic005G111700 Sobic005G111700 Sobic001G201900--Sobic005G111700 Sobic001G513800 Sobic001G513800 Sobic001G201900--Sobic001G513800 Sobic004G064300 Sobic004G064300 Sobic001G201900--Sobic004G064300 Sobic001G116500 Sobic001G116500 Sobic001G201900--Sobic001G116500 Sobic003G403300 Sobic003G403300 Sobic001G201900--Sobic003G403300 Sobic009G183700--Sobic010G277600 Sobic002G277100 Sobic002G277100 Sobic009G183700--Sobic002G277100 Sobic009G183700--Sobic010G005500 Sobic003G002300 Sobic003G002300 Sobic009G183700--Sobic003G002300 Sobic007G052400 Sobic007G052400 Sobic009G183700--Sobic007G052400 Sobic007G004600 Sobic007G004600 Sobic009G183700--Sobic007G004600 Sobic009G183700--Sobic009G030900 Sobic003G387800 Sobic003G387800 Sobic009G183700--Sobic003G387800 Sobic009G140600 Sobic009G140600 Sobic009G183700--Sobic009G140600 Sobic010G005500--Sobic007G052400 Sobic010G005500--Sobic003G002300 Sobic010G005500--Sobic009G030900 Sobic010G005500--Sobic009G183700 Sobic010G005500--Sobic002G277100 Sobic010G005500--Sobic003G387800 Sobic010G005500--Sobic004G012900 Sobic010G005500--Sobic010G277600 Sobic009G059300 Sobic009G059300 Sobic010G005500--Sobic009G059300
Octagon: transcription factors


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