Gene annotation
Transcriptome id Sobic.008G175900.1
Synonym Sb08g022010
Functional annotation expressed protein
UniProt A0A1B6PEC6
Pfam PF10358
Panther DB PTHR31182 PTHR31182:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G11760 : -
RAP-DB (Rice) LOC_Os12g42570.1 : expressed protein
MaizeGDB (Corn) Zm00025a007599 , Zm00025a025135 , Zm00025a006409
Brachypodium KQK13959 , KQJ85736
Barley HORVU5Hr1G092510.8 , HORVU5Hr1G092510.9 , HORVU5Hr1G092510.2 , HORVU5Hr1G092510.3 , HORVU5Hr1G092510.1 , HORVU5Hr1G092510.6 , HORVU5Hr1G092510.7 , HORVU5Hr1G092510.4 , HORVU5Hr1G092510.5 , HORVU5Hr1G007680.1 , HORVU5Hr1G007680.3 , HORVU5Hr1G007680.4 , HORVU5Hr1G007680.5 , HORVU5Hr1G007680.6 , HORVU5Hr1G007680.7 , HORVU5Hr1G007680.8 , HORVU5Hr1G092510.10
Wheat TraesCS5A02G027200 , TraesCS5B02G373900 , TraesCS5B02G026400 , TraesCS5A02G371800 , TraesCS5D02G381300 , TraesCS5D02G035100
Populus PNT18476 , PNT18475


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G182800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
2 Sobic.001G085500 NLI interacting factor-like phosphatase, putative, expressed -
3 Sobic.001G524200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
4 Sobic.004G203100 SNF7 domain containing protein, putative, expressed K12195: CHMP6, charged multivesicular body protein 6
5 Sobic.010G078100 pantothenate kinase, putative, expressed K09680: type II pantothenate kinase
6 Sobic.004G295800 chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
7 Sobic.002G333500 serine/threonine-protein kinase receptor precursor, putative, expressed -
8 Sobic.004G007300 expressed protein -
9 Sobic.010G058900 BSD domain containing protein, expressed -
10 Sobic.001G148300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
11 Sobic.010G188400 copine-1, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
12 Sobic.006G052100 nodulin, putative, expressed -
13 Sobic.009G054700 macrophage erythroblast attacher, putative, expressed K18624: MAEA, macrophage erythroblast attacher
14 Sobic.001G360000 pyruvate dehydrogenase kinase(PubMedID : 27016024)@kinase, putative, expressed K00898: pyruvate dehydrogenase kinase 2/3/4
15 Sobic.008G191100 nodulin, putative, expressed -
16 Sobic.004G298300 ELMO/CED-12 family protein, putative, expressed -
17 Sobic.010G264400 CAMK_CAMK_like.30 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
18 Sobic.004G034400 plant-specific domain TIGR01589 family protein, putative, expressed -
19 Sobic.001G076000 PHLOEM 2-LIKE A10, putative, expressed -
20 Sobic.004G320000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic008G175900 Sobic008G175900 Sobic003G182800 Sobic003G182800 Sobic008G175900--Sobic003G182800 Sobic001G085500 Sobic001G085500 Sobic008G175900--Sobic001G085500 Sobic001G524200 Sobic001G524200 Sobic008G175900--Sobic001G524200 Sobic004G203100 Sobic004G203100 Sobic008G175900--Sobic004G203100 Sobic010G078100 Sobic010G078100 Sobic008G175900--Sobic010G078100 Sobic004G295800 Sobic004G295800 Sobic008G175900--Sobic004G295800 Sobic002G333500 Sobic002G333500 Sobic008G175900--Sobic002G333500 Sobic004G007300 Sobic004G007300 Sobic008G175900--Sobic004G007300 Sobic010G058900 Sobic010G058900 Sobic008G175900--Sobic010G058900 Sobic003G182800--Sobic008G175900 Sobic001G148300 Sobic001G148300 Sobic003G182800--Sobic001G148300 Sobic009G177400 Sobic009G177400 Sobic003G182800--Sobic009G177400 Sobic010G188400 Sobic010G188400 Sobic003G182800--Sobic010G188400 Sobic010G145900 Sobic010G145900 Sobic003G182800--Sobic010G145900 Sobic002G313500 Sobic002G313500 Sobic003G182800--Sobic002G313500 Sobic003G305200 Sobic003G305200 Sobic003G182800--Sobic003G305200 Sobic006G232000 Sobic006G232000 Sobic003G182800--Sobic006G232000 Sobic001G489700 Sobic001G489700 Sobic003G182800--Sobic001G489700 Sobic002G378200 Sobic002G378200 Sobic001G085500--Sobic002G378200 Sobic001G085500--Sobic004G007300 Sobic006G092800 Sobic006G092800 Sobic001G085500--Sobic006G092800 Sobic004G298300 Sobic004G298300 Sobic001G085500--Sobic004G298300 Sobic009G032300 Sobic009G032300 Sobic001G085500--Sobic009G032300 Sobic001G127500 Sobic001G127500 Sobic001G085500--Sobic001G127500 Sobic008G165000 Sobic008G165000 Sobic001G085500--Sobic008G165000 Sobic001G028400 Sobic001G028400 Sobic001G085500--Sobic001G028400 Sobic004G034400 Sobic004G034400 Sobic001G085500--Sobic004G034400 Sobic004G027100 Sobic004G027100 Sobic001G524200--Sobic004G027100 Sobic010G217400 Sobic010G217400 Sobic001G524200--Sobic010G217400 Sobic007G130600 Sobic007G130600 Sobic001G524200--Sobic007G130600 Sobic003G145900 Sobic003G145900 Sobic001G524200--Sobic003G145900 Sobic005G007800 Sobic005G007800 Sobic001G524200--Sobic005G007800 Sobic001G524200--Sobic010G078100 Sobic006G114500 Sobic006G114500 Sobic001G524200--Sobic006G114500 Sobic002G303000 Sobic002G303000 Sobic001G524200--Sobic002G303000 Sobic009G121100 Sobic009G121100 Sobic001G524200--Sobic009G121100 Sobic010G168600 Sobic010G168600 Sobic004G203100--Sobic010G168600 Sobic003G007500 Sobic003G007500 Sobic004G203100--Sobic003G007500 Sobic002G352700 Sobic002G352700 Sobic004G203100--Sobic002G352700 Sobic001G478300 Sobic001G478300 Sobic004G203100--Sobic001G478300 Sobic008G180900 Sobic008G180900 Sobic004G203100--Sobic008G180900 Sobic010G238700 Sobic010G238700 Sobic004G203100--Sobic010G238700 Sobic009G054700 Sobic009G054700 Sobic004G203100--Sobic009G054700 Sobic010G083700 Sobic010G083700 Sobic004G203100--Sobic010G083700 Sobic004G203100--Sobic010G058900 Sobic008G160700 Sobic008G160700 Sobic010G078100--Sobic008G160700 Sobic010G078100--Sobic002G303000 Sobic010G078100--Sobic009G121100 Sobic006G214500 Sobic006G214500 Sobic010G078100--Sobic006G214500 Sobic009G027000 Sobic009G027000 Sobic010G078100--Sobic009G027000 Sobic001G359400 Sobic001G359400 Sobic010G078100--Sobic001G359400 Sobic001G373100 Sobic001G373100 Sobic010G078100--Sobic001G373100 Sobic006G122400 Sobic006G122400 Sobic010G078100--Sobic006G122400 Sobic010G078100--Sobic004G295800 Sobic008G191100 Sobic008G191100 Sobic004G295800--Sobic008G191100 Sobic002G132000 Sobic002G132000 Sobic004G295800--Sobic002G132000 Sobic007G024700 Sobic007G024700 Sobic004G295800--Sobic007G024700 Sobic004G295800--Sobic009G121100 Sobic004G006200 Sobic004G006200 Sobic004G295800--Sobic004G006200 Sobic004G021100 Sobic004G021100 Sobic004G295800--Sobic004G021100 Sobic001G373200 Sobic001G373200 Sobic004G295800--Sobic001G373200 Sobic003G407300 Sobic003G407300 Sobic004G295800--Sobic003G407300 Sobic001G290000 Sobic001G290000 Sobic004G295800--Sobic001G290000 Sobic008G089700 Sobic008G089700 Sobic002G333500--Sobic008G089700 Sobic004G039600 Sobic004G039600 Sobic002G333500--Sobic004G039600 Sobic009G226400 Sobic009G226400 Sobic002G333500--Sobic009G226400 Sobic007G184500 Sobic007G184500 Sobic002G333500--Sobic007G184500 Sobic005G216300 Sobic005G216300 Sobic002G333500--Sobic005G216300 Sobic001G371200 Sobic001G371200 Sobic002G333500--Sobic001G371200 Sobic010G125200 Sobic010G125200 Sobic002G333500--Sobic010G125200 Sobic002G111600 Sobic002G111600 Sobic002G333500--Sobic002G111600 Sobic006G252700 Sobic006G252700 Sobic002G333500--Sobic006G252700 Sobic002G197100 Sobic002G197100 Sobic004G007300--Sobic002G197100 Sobic001G408700 Sobic001G408700 Sobic004G007300--Sobic001G408700 Sobic004G345700 Sobic004G345700 Sobic004G007300--Sobic004G345700 Sobic004G007300--Sobic006G092800 Sobic004G350100 Sobic004G350100 Sobic004G007300--Sobic004G350100 Sobic006G173100 Sobic006G173100 Sobic004G007300--Sobic006G173100 Sobic004G283000 Sobic004G283000 Sobic004G007300--Sobic004G283000 Sobic008G129100 Sobic008G129100 Sobic004G007300--Sobic008G129100 Sobic001G056200 Sobic001G056200 Sobic004G007300--Sobic001G056200 Sobic002G256300 Sobic002G256300 Sobic010G058900--Sobic002G256300 Sobic002G084300 Sobic002G084300 Sobic010G058900--Sobic002G084300 Sobic004G104900 Sobic004G104900 Sobic010G058900--Sobic004G104900 Sobic009G198100 Sobic009G198100 Sobic010G058900--Sobic009G198100 Sobic010G058900--Sobic009G054700 Sobic010G058900--Sobic001G028400 Sobic010G058900--Sobic010G168600 Sobic007G118200 Sobic007G118200 Sobic010G058900--Sobic007G118200 Sobic001G083600 Sobic001G083600 Sobic010G058900--Sobic001G083600
Octagon: transcription factors


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