Gene annotation
Transcriptome id Sobic.009G023801.1
Synonym -
Functional annotation -
UniProt A0A1Z5R0M0
Pfam PF15054
Panther DB PTHR33528 PTHR33528:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G25225 : -
RAP-DB (Rice) LOC_Os05g02740.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G041100 RNA recognition motif containing protein, putative, expressed K12833: pre-mRNA branch site protein p14
2 Sobic.003G043400 syntaxin, putative, expressed K08490: syntaxin 5
3 Sobic.002G035900 glycine-rich protein, putative, expressed K13344: peroxin-13
4 Sobic.002G423800 trafficking protein particle complex subunit, putative, expressed -
5 Sobic.009G122100 tetratricopeptide repeat containing protein, putative, expressed K17969: FIS1, TTC11, mitochondrial fission 1 protein
6 Sobic.003G104700 Rer1 protein, putative, expressed -
7 Sobic.004G204800 26S proteasome non-ATPase regulatory subunit 6, putative, expressed K03037: PSMD6, 26S proteasome regulatory subunit N7
8 Sobic.009G191600 tesmin/TSO1-like CXC domain containing protein, expressed -
9 Sobic.007G152400 eukaryotic translation initiation factor 6, putative, expressed K03264: translation initiation factor 6
10 Sobic.001G066700 GLTP domain containing protein, putative, expressed -
11 Sobic.010G163600 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
12 Sobic.004G335000 26S protease regulatory subunit 6A, putative, expressed K03065: PSMC3, 26S proteasome regulatory subunit T5
13 Sobic.002G257400 peptidase, T1 family, putative, expressed -
14 Sobic.010G266300 translocon-associated protein subunit alpha precursor, putative, expressed K13249: translocon-associated protein subunit alpha
15 Sobic.003G362400 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
16 Sobic.007G068000 postsynaptic protein CRIPT, putative, expressed -
17 Sobic.002G261900 arabinogalactan protein, putative, expressed -
18 Sobic.001G147100 pre-rRNA-processing protein TSR2, putative, expressed K14800: pre-rRNA-processing protein TSR2
19 Sobic.010G088300 serine/threonine-protein phosphatase 2A activator 2, putative, expressed K17605: PPP2R4, serine/threonine-protein phosphatase 2A activator
20 Sobic.004G012800 DNA-directed RNA polymerase II subunit RPB4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4


Gene co-expression network
sample Sobic009G023801 Sobic009G023801 Sobic001G041100 Sobic001G041100 Sobic009G023801--Sobic001G041100 Sobic003G043400 Sobic003G043400 Sobic009G023801--Sobic003G043400 Sobic002G035900 Sobic002G035900 Sobic009G023801--Sobic002G035900 Sobic002G423800 Sobic002G423800 Sobic009G023801--Sobic002G423800 Sobic009G122100 Sobic009G122100 Sobic009G023801--Sobic009G122100 Sobic003G104700 Sobic003G104700 Sobic009G023801--Sobic003G104700 Sobic004G204800 Sobic004G204800 Sobic009G023801--Sobic004G204800 Sobic009G191600 Sobic009G191600 Sobic009G023801--Sobic009G191600 Sobic007G152400 Sobic007G152400 Sobic009G023801--Sobic007G152400 Sobic004G265700 Sobic004G265700 Sobic001G041100--Sobic004G265700 Sobic006G141500 Sobic006G141500 Sobic001G041100--Sobic006G141500 Sobic010G163600 Sobic010G163600 Sobic001G041100--Sobic010G163600 Sobic003G362400 Sobic003G362400 Sobic001G041100--Sobic003G362400 Sobic001G066700 Sobic001G066700 Sobic001G041100--Sobic001G066700 Sobic010G213400 Sobic010G213400 Sobic001G041100--Sobic010G213400 Sobic006G010600 Sobic006G010600 Sobic001G041100--Sobic006G010600 Sobic001G041100--Sobic009G191600 Sobic007G203700 Sobic007G203700 Sobic001G041100--Sobic007G203700 Sobic003G043400--Sobic002G423800 Sobic001G010700 Sobic001G010700 Sobic003G043400--Sobic001G010700 Sobic002G428200 Sobic002G428200 Sobic003G043400--Sobic002G428200 Sobic008G137600 Sobic008G137600 Sobic003G043400--Sobic008G137600 Sobic002G261900 Sobic002G261900 Sobic003G043400--Sobic002G261900 Sobic001G532100 Sobic001G532100 Sobic003G043400--Sobic001G532100 Sobic004G335000 Sobic004G335000 Sobic003G043400--Sobic004G335000 Sobic003G043400--Sobic007G152400 Sobic006G222400 Sobic006G222400 Sobic003G043400--Sobic006G222400 Sobic004G060600 Sobic004G060600 Sobic002G035900--Sobic004G060600 Sobic001G433400 Sobic001G433400 Sobic002G035900--Sobic001G433400 Sobic007G096700 Sobic007G096700 Sobic002G035900--Sobic007G096700 Sobic002G400000 Sobic002G400000 Sobic002G035900--Sobic002G400000 Sobic001G501200 Sobic001G501200 Sobic002G035900--Sobic001G501200 Sobic007G168600 Sobic007G168600 Sobic002G035900--Sobic007G168600 Sobic002G035900--Sobic009G122100 Sobic003G077900 Sobic003G077900 Sobic002G035900--Sobic003G077900 Sobic003G367451 Sobic003G367451 Sobic002G035900--Sobic003G367451 Sobic002G423800--Sobic003G043400 Sobic006G211800 Sobic006G211800 Sobic002G423800--Sobic006G211800 Sobic002G423800--Sobic001G010700 Sobic001G444300 Sobic001G444300 Sobic002G423800--Sobic001G444300 Sobic002G423800--Sobic002G428200 Sobic001G542900 Sobic001G542900 Sobic002G423800--Sobic001G542900 Sobic006G252200 Sobic006G252200 Sobic002G423800--Sobic006G252200 Sobic008G145100 Sobic008G145100 Sobic002G423800--Sobic008G145100 Sobic007G176200 Sobic007G176200 Sobic002G423800--Sobic007G176200 Sobic009G122100--Sobic007G096700 Sobic002G257400 Sobic002G257400 Sobic009G122100--Sobic002G257400 Sobic001G461900 Sobic001G461900 Sobic009G122100--Sobic001G461900 Sobic008G111400 Sobic008G111400 Sobic009G122100--Sobic008G111400 Sobic010G266300 Sobic010G266300 Sobic009G122100--Sobic010G266300 Sobic001G224400 Sobic001G224400 Sobic009G122100--Sobic001G224400 Sobic002G222900 Sobic002G222900 Sobic009G122100--Sobic002G222900 Sobic009G122100--Sobic007G152400 Sobic001G058100 Sobic001G058100 Sobic009G122100--Sobic001G058100 Sobic003G104700--Sobic002G428200 Sobic003G104700--Sobic006G252200 Sobic007G076300 Sobic007G076300 Sobic003G104700--Sobic007G076300 Sobic002G078400 Sobic002G078400 Sobic003G104700--Sobic002G078400 Sobic003G104700--Sobic003G367451 Sobic007G091000 Sobic007G091000 Sobic003G104700--Sobic007G091000 Sobic001G236300 Sobic001G236300 Sobic003G104700--Sobic001G236300 Sobic004G224900 Sobic004G224900 Sobic003G104700--Sobic004G224900 Sobic003G104700--Sobic004G335000 Sobic004G204800--Sobic002G257400 Sobic004G204800--Sobic007G152400 Sobic004G204800--Sobic004G335000 Sobic004G204800--Sobic003G043400 Sobic004G204800--Sobic010G266300 Sobic004G204800--Sobic001G058100 Sobic004G204800--Sobic002G428200 Sobic003G428200 Sobic003G428200 Sobic004G204800--Sobic003G428200 Sobic004G204800--Sobic001G010700 Sobic009G191600--Sobic001G066700 Sobic009G191600--Sobic003G362400 Sobic006G062800 Sobic006G062800 Sobic009G191600--Sobic006G062800 Sobic009G191600--Sobic001G041100 Sobic003G358300 Sobic003G358300 Sobic009G191600--Sobic003G358300 Sobic009G191600--Sobic010G213400 Sobic003G023500 Sobic003G023500 Sobic009G191600--Sobic003G023500 Sobic002G376500 Sobic002G376500 Sobic009G191600--Sobic002G376500 Sobic009G191600--Sobic001G224400 Sobic005G111100 Sobic005G111100 Sobic007G152400--Sobic005G111100 Sobic007G152400--Sobic007G091000 Sobic007G152400--Sobic002G428200 Sobic007G152400--Sobic002G257400 Sobic001G128400 Sobic001G128400 Sobic007G152400--Sobic001G128400 Sobic001G481700 Sobic001G481700 Sobic007G152400--Sobic001G481700 Sobic007G152400--Sobic008G137600 Sobic007G152400--Sobic004G204800 Sobic002G331300 Sobic002G331300 Sobic007G152400--Sobic002G331300
Octagon: transcription factors


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