Gene annotation
Transcriptome id Sobic.009G059000.1
Synonym
Functional annotation -
UniProt C5Z115
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G147100 esterase/lipase/thioesterase, putative, expressed -
2 Sobic.006G144000 zinc finger, C3HC4 type domain containing protein, expressed -
3 Sobic.010G237650 - -
4 Sobic.004G116600 E1-BTB1 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed -
5 Sobic.004G042900 VIL2 protein, putative, expressed -
6 Sobic.004G218300 Zinc finger, ZZ type domain containing protein, expressed -
7 Sobic.006G215100 expressed protein -
8 Sobic.006G170900 growth regulator related protein, putative, expressed -
9 Sobic.003G092066 - -
10 Sobic.004G180900 PSP domain containing protein, expressed K13128: zinc finger CCHC domain-containing protein 8
11 Sobic.001G017200 protein transporter, putative, expressed K12275: translocation protein SEC62
12 Sobic.001G202266 - -
13 Sobic.010G073600 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@auxin response factor, putative, expressed -
14 Sobic.007G188900 AP2 domain containing protein, expressed -
15 Sobic.005G009100 OsFBX184 - F-box domain containing protein, expressed -
16 Sobic.006G244300 expressed protein -
17 Sobic.001G049600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@squalene synthetase, putative, expressed K00801: farnesyl-diphosphate farnesyltransferase
18 Sobic.002G147200 esterase/lipase/thioesterase, putative, expressed -
19 Sobic.004G259300 Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed K15687: E3 ubiquitin-protein ligase makorin
20 Sobic.002G056900 targeting protein for Xklp2, putative, expressed -


Gene co-expression network
sample Sobic009G059000 Sobic009G059000 Sobic002G147100 Sobic002G147100 Sobic009G059000--Sobic002G147100 Sobic006G144000 Sobic006G144000 Sobic009G059000--Sobic006G144000 Sobic010G237650 Sobic010G237650 Sobic009G059000--Sobic010G237650 Sobic004G116600 Sobic004G116600 Sobic009G059000--Sobic004G116600 Sobic004G042900 Sobic004G042900 Sobic009G059000--Sobic004G042900 Sobic004G218300 Sobic004G218300 Sobic009G059000--Sobic004G218300 Sobic006G215100 Sobic006G215100 Sobic009G059000--Sobic006G215100 Sobic006G170900 Sobic006G170900 Sobic009G059000--Sobic006G170900 Sobic003G092066 Sobic003G092066 Sobic009G059000--Sobic003G092066 Sobic002G147200 Sobic002G147200 Sobic002G147100--Sobic002G147200 Sobic007G147400 Sobic007G147400 Sobic002G147100--Sobic007G147400 Sobic007G030100 Sobic007G030100 Sobic002G147100--Sobic007G030100 Sobic009G228400 Sobic009G228400 Sobic002G147100--Sobic009G228400 Sobic002G147100--Sobic004G042900 Sobic009G102000 Sobic009G102000 Sobic002G147100--Sobic009G102000 Sobic006G165800 Sobic006G165800 Sobic002G147100--Sobic006G165800 Sobic003G398400 Sobic003G398400 Sobic002G147100--Sobic003G398400 Sobic002G317400 Sobic002G317400 Sobic002G147100--Sobic002G317400 Sobic001G017200 Sobic001G017200 Sobic006G144000--Sobic001G017200 Sobic009G017200 Sobic009G017200 Sobic006G144000--Sobic009G017200 Sobic009G059400 Sobic009G059400 Sobic006G144000--Sobic009G059400 Sobic006G144000--Sobic010G237650 Sobic004G180900 Sobic004G180900 Sobic006G144000--Sobic004G180900 Sobic006G144000--Sobic004G116600 Sobic006G130200 Sobic006G130200 Sobic006G144000--Sobic006G130200 Sobic004G313300 Sobic004G313300 Sobic006G144000--Sobic004G313300 Sobic001G425000 Sobic001G425000 Sobic006G144000--Sobic001G425000 Sobic002G033600 Sobic002G033600 Sobic010G237650--Sobic002G033600 Sobic010G237650--Sobic003G092066 Sobic002G268900 Sobic002G268900 Sobic010G237650--Sobic002G268900 Sobic010G237650--Sobic006G144000 Sobic007G139400 Sobic007G139400 Sobic010G237650--Sobic007G139400 Sobic010G237650--Sobic006G215100 Sobic010G073600 Sobic010G073600 Sobic010G237650--Sobic010G073600 Sobic005G128000 Sobic005G128000 Sobic010G237650--Sobic005G128000 Sobic010G237650--Sobic009G102000 Sobic001G202266 Sobic001G202266 Sobic004G116600--Sobic001G202266 Sobic001G287800 Sobic001G287800 Sobic004G116600--Sobic001G287800 Sobic004G116600--Sobic004G180900 Sobic004G116600--Sobic006G130200 Sobic005G049000 Sobic005G049000 Sobic004G116600--Sobic005G049000 Sobic004G116600--Sobic006G144000 Sobic004G116600--Sobic004G218300 Sobic004G116600--Sobic001G017200 Sobic007G192400 Sobic007G192400 Sobic004G116600--Sobic007G192400 Sobic004G042900--Sobic002G147100 Sobic004G042900--Sobic001G017200 Sobic005G009100 Sobic005G009100 Sobic004G042900--Sobic005G009100 Sobic004G353400 Sobic004G353400 Sobic004G042900--Sobic004G353400 Sobic004G042900--Sobic007G030100 Sobic003G190200 Sobic003G190200 Sobic004G042900--Sobic003G190200 Sobic004G042900--Sobic006G144000 Sobic004G042900--Sobic002G147200 Sobic004G042900--Sobic004G218300 Sobic004G218300--Sobic003G398400 Sobic004G218300--Sobic006G130200 Sobic004G259300 Sobic004G259300 Sobic004G218300--Sobic004G259300 Sobic004G218300--Sobic009G228400 Sobic004G218300--Sobic006G215100 Sobic003G407100 Sobic003G407100 Sobic004G218300--Sobic003G407100 Sobic004G218300--Sobic007G192400 Sobic004G218300--Sobic002G147100 Sobic004G218300--Sobic002G317400 Sobic006G215100--Sobic010G073600 Sobic006G215100--Sobic004G218300 Sobic006G215100--Sobic010G237650 Sobic006G048300 Sobic006G048300 Sobic006G215100--Sobic006G048300 Sobic006G215100--Sobic003G398400 Sobic006G215100--Sobic006G130200 Sobic006G215100--Sobic002G147100 Sobic003G402900 Sobic003G402900 Sobic006G215100--Sobic003G402900 Sobic010G074900 Sobic010G074900 Sobic006G215100--Sobic010G074900 Sobic005G123400 Sobic005G123400 Sobic006G170900--Sobic005G123400 Sobic003G124600 Sobic003G124600 Sobic006G170900--Sobic003G124600 Sobic003G113300 Sobic003G113300 Sobic006G170900--Sobic003G113300 Sobic007G034200 Sobic007G034200 Sobic006G170900--Sobic007G034200 Sobic006G103700 Sobic006G103700 Sobic006G170900--Sobic006G103700 Sobic002G292800 Sobic002G292800 Sobic006G170900--Sobic002G292800 Sobic003G194800 Sobic003G194800 Sobic006G170900--Sobic003G194800 Sobic004G106250 Sobic004G106250 Sobic006G170900--Sobic004G106250 Sobic006G237500 Sobic006G237500 Sobic006G170900--Sobic006G237500 Sobic003G092066--Sobic010G237650 Sobic009G129600 Sobic009G129600 Sobic003G092066--Sobic009G129600 Sobic003G092033 Sobic003G092033 Sobic003G092066--Sobic003G092033 Sobic003G092500 Sobic003G092500 Sobic003G092066--Sobic003G092500 Sobic003G092066--Sobic006G144000 Sobic003G092066--Sobic002G268900 Sobic003G092066--Sobic002G147100 Sobic003G092066--Sobic002G033600 Sobic009G000400 Sobic009G000400 Sobic003G092066--Sobic009G000400
Octagon: transcription factors


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