Gene annotation
Transcriptome id Sobic.002G056900.1
Synonym Sb02g004800
Functional annotation targeting protein for Xklp2, putative, expressed
UniProt C5XB62
Pfam PF06886
Panther DB PTHR31358 PTHR31358:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G54460 : TPX2 (targeting protein for Xklp2) protein family
RAP-DB (Rice) LOC_Os07g08790.1 : targeting protein for Xklp2, putative, expressed
MaizeGDB (Corn) Zm00025a016068 , Zm00025a045212
Brachypodium KQK20537 , KQK12680
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G056900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G039800 expressed protein -
2 Sobic.001G017200 protein transporter, putative, expressed K12275: translocation protein SEC62
3 Sobic.004G180900 PSP domain containing protein, expressed K13128: zinc finger CCHC domain-containing protein 8
4 Sobic.004G218300 Zinc finger, ZZ type domain containing protein, expressed -
5 Sobic.002G264600 GRAM domain containing protein, expressed -
6 Sobic.003G381600 ATP-dependent Clp protease ATP-binding subunit clpX, putative, expressed K03544: clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
7 Sobic.004G116600 E1-BTB1 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed -
8 Sobic.006G144000 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.001G424900 - -
10 Sobic.006G161000 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
11 Sobic.007G147400 - -
12 Sobic.002G317400 expressed protein -
13 Sobic.003G398400 expressed protein -
14 Sobic.009G059000 - -
15 Sobic.004G345400 WD domain, G-beta repeat domain containing protein, expressed K05757: actin related protein 2/3 complex, subunit 1A/1B
16 Sobic.005G009100 OsFBX184 - F-box domain containing protein, expressed -
17 Sobic.010G213500 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
18 Sobic.006G186400 ZOS4-12 - C2H2 zinc finger protein, expressed -
19 Sobic.009G017200 transporter family protein, putative, expressed K15276: SLC35B2, solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2
20 Sobic.001G202266 - -


Gene co-expression network
sample Sobic002G056900 Sobic002G056900 Sobic009G039800 Sobic009G039800 Sobic002G056900--Sobic009G039800 Sobic001G017200 Sobic001G017200 Sobic002G056900--Sobic001G017200 Sobic004G180900 Sobic004G180900 Sobic002G056900--Sobic004G180900 Sobic004G218300 Sobic004G218300 Sobic002G056900--Sobic004G218300 Sobic002G264600 Sobic002G264600 Sobic002G056900--Sobic002G264600 Sobic003G381600 Sobic003G381600 Sobic002G056900--Sobic003G381600 Sobic004G116600 Sobic004G116600 Sobic002G056900--Sobic004G116600 Sobic006G144000 Sobic006G144000 Sobic002G056900--Sobic006G144000 Sobic001G424900 Sobic001G424900 Sobic002G056900--Sobic001G424900 Sobic009G039800--Sobic002G056900 Sobic006G210700 Sobic006G210700 Sobic009G039800--Sobic006G210700 Sobic010G077500 Sobic010G077500 Sobic009G039800--Sobic010G077500 Sobic009G228000 Sobic009G228000 Sobic009G039800--Sobic009G228000 Sobic009G166600 Sobic009G166600 Sobic009G039800--Sobic009G166600 Sobic003G043000 Sobic003G043000 Sobic009G039800--Sobic003G043000 Sobic009G039800--Sobic004G180900 Sobic009G039800--Sobic001G424900 Sobic008G116700 Sobic008G116700 Sobic009G039800--Sobic008G116700 Sobic001G017200--Sobic006G144000 Sobic001G017200--Sobic004G180900 Sobic009G017200 Sobic009G017200 Sobic001G017200--Sobic009G017200 Sobic007G158900 Sobic007G158900 Sobic001G017200--Sobic007G158900 Sobic004G042900 Sobic004G042900 Sobic001G017200--Sobic004G042900 Sobic009G059400 Sobic009G059400 Sobic001G017200--Sobic009G059400 Sobic007G192400 Sobic007G192400 Sobic001G017200--Sobic007G192400 Sobic001G017200--Sobic004G116600 Sobic007G218600 Sobic007G218600 Sobic001G017200--Sobic007G218600 Sobic004G180900--Sobic009G017200 Sobic007G056500 Sobic007G056500 Sobic004G180900--Sobic007G056500 Sobic001G425000 Sobic001G425000 Sobic004G180900--Sobic001G425000 Sobic004G345400 Sobic004G345400 Sobic004G180900--Sobic004G345400 Sobic006G186400 Sobic006G186400 Sobic004G180900--Sobic006G186400 Sobic008G058800 Sobic008G058800 Sobic004G180900--Sobic008G058800 Sobic007G026000 Sobic007G026000 Sobic004G180900--Sobic007G026000 Sobic004G180900--Sobic010G077500 Sobic004G180900--Sobic003G381600 Sobic003G398400 Sobic003G398400 Sobic004G218300--Sobic003G398400 Sobic006G130200 Sobic006G130200 Sobic004G218300--Sobic006G130200 Sobic004G259300 Sobic004G259300 Sobic004G218300--Sobic004G259300 Sobic009G228400 Sobic009G228400 Sobic004G218300--Sobic009G228400 Sobic006G215100 Sobic006G215100 Sobic004G218300--Sobic006G215100 Sobic003G407100 Sobic003G407100 Sobic004G218300--Sobic003G407100 Sobic004G218300--Sobic007G192400 Sobic002G147100 Sobic002G147100 Sobic004G218300--Sobic002G147100 Sobic002G317400 Sobic002G317400 Sobic004G218300--Sobic002G317400 Sobic002G264600--Sobic004G345400 Sobic002G164300 Sobic002G164300 Sobic002G264600--Sobic002G164300 Sobic002G264600--Sobic003G398400 Sobic010G185400 Sobic010G185400 Sobic002G264600--Sobic010G185400 Sobic008G149800 Sobic008G149800 Sobic002G264600--Sobic008G149800 Sobic002G357700 Sobic002G357700 Sobic002G264600--Sobic002G357700 Sobic001G313400 Sobic001G313400 Sobic002G264600--Sobic001G313400 Sobic003G064700 Sobic003G064700 Sobic002G264600--Sobic003G064700 Sobic003G189600 Sobic003G189600 Sobic002G264600--Sobic003G189600 Sobic003G381600--Sobic004G180900 Sobic001G130200 Sobic001G130200 Sobic003G381600--Sobic001G130200 Sobic003G381600--Sobic009G059400 Sobic003G381600--Sobic009G017200 Sobic006G224300 Sobic006G224300 Sobic003G381600--Sobic006G224300 Sobic003G381600--Sobic001G017200 Sobic007G018200 Sobic007G018200 Sobic003G381600--Sobic007G018200 Sobic003G381600--Sobic004G116600 Sobic001G405300 Sobic001G405300 Sobic003G381600--Sobic001G405300 Sobic001G202266 Sobic001G202266 Sobic004G116600--Sobic001G202266 Sobic001G287800 Sobic001G287800 Sobic004G116600--Sobic001G287800 Sobic004G116600--Sobic004G180900 Sobic004G116600--Sobic006G130200 Sobic005G049000 Sobic005G049000 Sobic004G116600--Sobic005G049000 Sobic004G116600--Sobic006G144000 Sobic004G116600--Sobic004G218300 Sobic004G116600--Sobic001G017200 Sobic004G116600--Sobic007G192400 Sobic006G144000--Sobic001G017200 Sobic006G144000--Sobic009G017200 Sobic006G144000--Sobic009G059400 Sobic010G237650 Sobic010G237650 Sobic006G144000--Sobic010G237650 Sobic006G144000--Sobic004G180900 Sobic006G144000--Sobic004G116600 Sobic006G144000--Sobic006G130200 Sobic004G313300 Sobic004G313300 Sobic006G144000--Sobic004G313300 Sobic006G144000--Sobic001G425000 Sobic001G424900--Sobic009G059400 Sobic001G424900--Sobic007G218600 Sobic003G058500 Sobic003G058500 Sobic001G424900--Sobic003G058500 Sobic007G223100 Sobic007G223100 Sobic001G424900--Sobic007G223100 Sobic001G424900--Sobic009G166600 Sobic005G009100 Sobic005G009100 Sobic001G424900--Sobic005G009100 Sobic001G424900--Sobic008G116700 Sobic001G424900--Sobic001G130200 Sobic001G424900--Sobic004G345400
Octagon: transcription factors


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