Gene annotation
Transcriptome id Sobic.009G172600.1
Synonym Sb09g023320
Functional annotation Major facilitator superfamily protein( (PubMedID : 26759170,(PubMedID : 24597475)
NFD4, putative, expressed
UniProt C5YZR1
Pfam PF06813
Panther DB PTHR21576 PTHR21576:SF36
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G30300 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os05g39800.1 : NFD4, putative, expressed
MaizeGDB (Corn) Zm00025a043980
Brachypodium KQK05775
Barley HORVU3Hr1G045610.3 , HORVU3Hr1G045610.2 , HORVU3Hr1G045610.1 , HORVU1Hr1G070190.2 , HORVU1Hr1G070190.3 , HORVU1Hr1G070190.1 , HORVU1Hr1G070190.4 , HORVU1Hr1G070190.5 , HORVU3Hr1G088320.1
Wheat TraesCS3A02G346400 , TraesCS1A02G299200 , TraesCS3B02G378200 , TraesCS1D02G292000 , TraesCS3D02G340100 , TraesCS1B02G309000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G181400 TraB family protein, putative, expressed -
2 Sobic.003G103300 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor, putative, expressed K00099: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
3 Sobic.005G172400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PAP fibrillin family domain containing protein, expressed -
4 Sobic.003G419900 photosystem II reaction center PSB28 protein, chloroplast precursor, putative, expressed K08903: photosystem II 13kDa protein
5 Sobic.001G276300 peptide transporter PTR2, putative, expressed -
6 Sobic.004G359600 cell division inhibitor, putative, expressed K07071: uncharacterized protein
7 Sobic.001G015200 Unnamed(PubMedID : 24676859)@S1 RNA binding domain containing protein, expressed -
8 Sobic.007G053800 RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
9 Sobic.003G378600 "oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor"(PubMedID : 26465154)@NADH dehydrogenase I subunit N, putative, expressed -
10 Sobic.008G088821 - K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
11 Sobic.002G244400 EF hand family protein, expressed -
12 Sobic.001G500700 expressed protein -
13 Sobic.001G005200 expressed protein -
14 Sobic.009G140600 hydrolase, alpha/beta fold family domain containing protein, expressed -
15 Sobic.001G104600 expressed protein -
16 Sobic.001G317800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.007G169100 glutathione S-transferase, N-terminal domain containing protein, expressed -
18 Sobic.006G265900 thioredoxin, putative, expressed K03671: thioredoxin 1
19 Sobic.002G233700 -(PubMedID : 26976818)@dicarboxylate transporter 2(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
20 Sobic.010G245200 expressed protein -


Gene co-expression network
sample Sobic009G172600 Sobic009G172600 Sobic007G181400 Sobic007G181400 Sobic009G172600--Sobic007G181400 Sobic003G103300 Sobic003G103300 Sobic009G172600--Sobic003G103300 Sobic005G172400 Sobic005G172400 Sobic009G172600--Sobic005G172400 Sobic003G419900 Sobic003G419900 Sobic009G172600--Sobic003G419900 Sobic001G276300 Sobic001G276300 Sobic009G172600--Sobic001G276300 Sobic004G359600 Sobic004G359600 Sobic009G172600--Sobic004G359600 Sobic001G015200 Sobic001G015200 Sobic009G172600--Sobic001G015200 Sobic007G053800 Sobic007G053800 Sobic009G172600--Sobic007G053800 Sobic003G378600 Sobic003G378600 Sobic009G172600--Sobic003G378600 Sobic007G181400--Sobic001G015200 Sobic007G181400--Sobic003G419900 Sobic007G181400--Sobic004G359600 Sobic004G202200 Sobic004G202200 Sobic007G181400--Sobic004G202200 Sobic002G275300 Sobic002G275300 Sobic007G181400--Sobic002G275300 Sobic001G289500 Sobic001G289500 Sobic007G181400--Sobic001G289500 Sobic001G491000 Sobic001G491000 Sobic007G181400--Sobic001G491000 Sobic006G238200 Sobic006G238200 Sobic007G181400--Sobic006G238200 Sobic008G088821 Sobic008G088821 Sobic007G181400--Sobic008G088821 Sobic003G103300--Sobic001G015200 Sobic003G103300--Sobic008G088821 Sobic004G268400 Sobic004G268400 Sobic003G103300--Sobic004G268400 Sobic010G101000 Sobic010G101000 Sobic003G103300--Sobic010G101000 Sobic001G018000 Sobic001G018000 Sobic003G103300--Sobic001G018000 Sobic001G411100 Sobic001G411100 Sobic003G103300--Sobic001G411100 Sobic001G104700 Sobic001G104700 Sobic003G103300--Sobic001G104700 Sobic002G060800 Sobic002G060800 Sobic003G103300--Sobic002G060800 Sobic002G351200 Sobic002G351200 Sobic003G103300--Sobic002G351200 Sobic001G104600 Sobic001G104600 Sobic005G172400--Sobic001G104600 Sobic005G172400--Sobic001G015200 Sobic005G172400--Sobic003G103300 Sobic005G062700 Sobic005G062700 Sobic005G172400--Sobic005G062700 Sobic005G172400--Sobic010G101000 Sobic004G305900 Sobic004G305900 Sobic005G172400--Sobic004G305900 Sobic005G172400--Sobic001G289500 Sobic001G317800 Sobic001G317800 Sobic005G172400--Sobic001G317800 Sobic002G047400 Sobic002G047400 Sobic005G172400--Sobic002G047400 Sobic003G419900--Sobic007G181400 Sobic004G353100 Sobic004G353100 Sobic003G419900--Sobic004G353100 Sobic003G419900--Sobic004G359600 Sobic003G419900--Sobic004G202200 Sobic002G233700 Sobic002G233700 Sobic003G419900--Sobic002G233700 Sobic006G140500 Sobic006G140500 Sobic003G419900--Sobic006G140500 Sobic004G028300 Sobic004G028300 Sobic003G419900--Sobic004G028300 Sobic003G419900--Sobic001G289500 Sobic003G419900--Sobic001G015200 Sobic007G135800 Sobic007G135800 Sobic001G276300--Sobic007G135800 Sobic001G509200 Sobic001G509200 Sobic001G276300--Sobic001G509200 Sobic005G028800 Sobic005G028800 Sobic001G276300--Sobic005G028800 Sobic006G213700 Sobic006G213700 Sobic001G276300--Sobic006G213700 Sobic003G380200 Sobic003G380200 Sobic001G276300--Sobic003G380200 Sobic006G226601 Sobic006G226601 Sobic001G276300--Sobic006G226601 Sobic010G231500 Sobic010G231500 Sobic001G276300--Sobic010G231500 Sobic007G169100 Sobic007G169100 Sobic001G276300--Sobic007G169100 Sobic002G225100 Sobic002G225100 Sobic001G276300--Sobic002G225100 Sobic007G173800 Sobic007G173800 Sobic004G359600--Sobic007G173800 Sobic001G167900 Sobic001G167900 Sobic004G359600--Sobic001G167900 Sobic008G102000 Sobic008G102000 Sobic004G359600--Sobic008G102000 Sobic004G359600--Sobic007G181400 Sobic004G359600--Sobic003G378600 Sobic006G265900 Sobic006G265900 Sobic004G359600--Sobic006G265900 Sobic001G005200 Sobic001G005200 Sobic004G359600--Sobic001G005200 Sobic008G172700 Sobic008G172700 Sobic004G359600--Sobic008G172700 Sobic009G140600 Sobic009G140600 Sobic004G359600--Sobic009G140600 Sobic001G015200--Sobic008G088821 Sobic007G166300 Sobic007G166300 Sobic001G015200--Sobic007G166300 Sobic001G015200--Sobic003G103300 Sobic001G015200--Sobic006G140500 Sobic001G015200--Sobic002G047400 Sobic001G015200--Sobic001G509200 Sobic001G393300 Sobic001G393300 Sobic001G015200--Sobic001G393300 Sobic009G119300 Sobic009G119300 Sobic001G015200--Sobic009G119300 Sobic001G015200--Sobic010G101000 Sobic010G245200 Sobic010G245200 Sobic007G053800--Sobic010G245200 Sobic007G053800--Sobic006G265900 Sobic003G431700 Sobic003G431700 Sobic007G053800--Sobic003G431700 Sobic001G128600 Sobic001G128600 Sobic007G053800--Sobic001G128600 Sobic001G122300 Sobic001G122300 Sobic007G053800--Sobic001G122300 Sobic001G500700 Sobic001G500700 Sobic007G053800--Sobic001G500700 Sobic002G370600 Sobic002G370600 Sobic007G053800--Sobic002G370600 Sobic003G148200 Sobic003G148200 Sobic007G053800--Sobic003G148200 Sobic006G188000 Sobic006G188000 Sobic007G053800--Sobic006G188000 Sobic003G378600--Sobic009G140600 Sobic003G378600--Sobic001G005200 Sobic004G012900 Sobic004G012900 Sobic003G378600--Sobic004G012900 Sobic003G378600--Sobic008G102000 Sobic003G378600--Sobic001G122300 Sobic004G239100 Sobic004G239100 Sobic003G378600--Sobic004G239100 Sobic003G378600--Sobic004G359600 Sobic003G378600--Sobic002G233700 Sobic003G378600--Sobic008G172700
Octagon: transcription factors


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