Gene annotation
Transcriptome id Sobic.009G220500.1
Synonym
Functional annotation NBS-LRR disease resistance protein, putative, expressed
UniProt A0A1B6P9W8
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF414
NCBI CDD KOG1947; Leucine rich repeat proteins, some proteins contain F-box
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14470 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os04g53160.1 : NBS-LRR disease resistance protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU3Hr1G098150.8 , HORVU3Hr1G098150.9 , HORVU3Hr1G098150.6 , HORVU3Hr1G098150.7 , HORVU3Hr1G098150.4 , HORVU3Hr1G098150.5 , HORVU3Hr1G098150.2 , HORVU3Hr1G098150.3 , HORVU3Hr1G098150.1
Wheat TraesCS6D02G394100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G212500 expressed protein -
2 Sobic.010G239600 RNA polymerase I specific transcription initiation factor RRN3 family protein, putative, expressed K15216: RRN3, RNA polymerase I-specific transcription initiation factor RRN3
3 Sobic.006G036566 - -
4 Sobic.010G112000 expressed protein K17906: autophagy-related protein 2
5 Sobic.009G221000 NBS-LRR disease resistance protein, putative, expressed -
6 Sobic.007G183400 CC-NBS-LRR, putative, expressed -
7 Sobic.009G097200 saposin-like type B, region 1 family protein, putative, expressed K12382: PSAP, saposin
8 Sobic.002G169633 - -
9 Sobic.004G034900 histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
10 Sobic.005G001000 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
11 Sobic.004G174200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
12 Sobic.005G075100 rp3 protein, putative, expressed -
13 Sobic.002G008900 sister chromatid cohesion 2, putative, expressed K06672: SCC2, cohesin loading factor subunit SCC2
14 Sobic.006G225900 expressed protein -
15 Sobic.009G053900 HECT-domain domain containing protein, expressed K10589: ubiquitin-protein ligase E3 C
16 Sobic.004G355000 SAC9, putative, expressed -
17 Sobic.007G075400 expressed protein -
18 Sobic.003G205200 expressed protein K19027: zinc finger FYVE domain-containing protein 26
19 Sobic.004G239700 - -
20 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39


Gene co-expression network
sample Sobic009G220500 Sobic009G220500 Sobic002G212500 Sobic002G212500 Sobic009G220500--Sobic002G212500 Sobic010G239600 Sobic010G239600 Sobic009G220500--Sobic010G239600 Sobic006G036566 Sobic006G036566 Sobic009G220500--Sobic006G036566 Sobic010G112000 Sobic010G112000 Sobic009G220500--Sobic010G112000 Sobic009G221000 Sobic009G221000 Sobic009G220500--Sobic009G221000 Sobic007G183400 Sobic007G183400 Sobic009G220500--Sobic007G183400 Sobic009G097200 Sobic009G097200 Sobic009G220500--Sobic009G097200 Sobic002G169633 Sobic002G169633 Sobic009G220500--Sobic002G169633 Sobic004G034900 Sobic004G034900 Sobic009G220500--Sobic004G034900 Sobic002G212500--Sobic009G220500 Sobic002G212500--Sobic006G036566 Sobic002G212500--Sobic010G239600 Sobic002G033300 Sobic002G033300 Sobic002G212500--Sobic002G033300 Sobic010G240100 Sobic010G240100 Sobic002G212500--Sobic010G240100 Sobic009G003300 Sobic009G003300 Sobic002G212500--Sobic009G003300 Sobic002G124600 Sobic002G124600 Sobic002G212500--Sobic002G124600 Sobic002G212500--Sobic002G169633 Sobic005G032800 Sobic005G032800 Sobic002G212500--Sobic005G032800 Sobic007G193700 Sobic007G193700 Sobic010G239600--Sobic007G193700 Sobic006G055200 Sobic006G055200 Sobic010G239600--Sobic006G055200 Sobic010G239600--Sobic010G112000 Sobic002G008900 Sobic002G008900 Sobic010G239600--Sobic002G008900 Sobic004G263600 Sobic004G263600 Sobic010G239600--Sobic004G263600 Sobic010G010700 Sobic010G010700 Sobic010G239600--Sobic010G010700 Sobic010G239600--Sobic002G169633 Sobic005G001000 Sobic005G001000 Sobic010G239600--Sobic005G001000 Sobic001G454500 Sobic001G454500 Sobic010G239600--Sobic001G454500 Sobic010G100516 Sobic010G100516 Sobic006G036566--Sobic010G100516 Sobic006G036566--Sobic002G033300 Sobic006G036566--Sobic004G263600 Sobic005G075100 Sobic005G075100 Sobic006G036566--Sobic005G075100 Sobic003G190000 Sobic003G190000 Sobic006G036566--Sobic003G190000 Sobic002G345700 Sobic002G345700 Sobic006G036566--Sobic002G345700 Sobic006G036566--Sobic002G212500 Sobic006G036566--Sobic010G239600 Sobic001G072500 Sobic001G072500 Sobic006G036566--Sobic001G072500 Sobic001G498600 Sobic001G498600 Sobic010G112000--Sobic001G498600 Sobic010G112000--Sobic004G034900 Sobic010G112000--Sobic002G008900 Sobic001G540400 Sobic001G540400 Sobic010G112000--Sobic001G540400 Sobic001G289600 Sobic001G289600 Sobic010G112000--Sobic001G289600 Sobic001G146800 Sobic001G146800 Sobic010G112000--Sobic001G146800 Sobic005G008800 Sobic005G008800 Sobic010G112000--Sobic005G008800 Sobic001G280900 Sobic001G280900 Sobic010G112000--Sobic001G280900 Sobic001G058700 Sobic001G058700 Sobic010G112000--Sobic001G058700 Sobic005G019600 Sobic005G019600 Sobic009G221000--Sobic005G019600 Sobic009G221000--Sobic005G032800 Sobic002G173000 Sobic002G173000 Sobic009G221000--Sobic002G173000 Sobic008G101000 Sobic008G101000 Sobic009G221000--Sobic008G101000 Sobic005G209100 Sobic005G209100 Sobic009G221000--Sobic005G209100 Sobic002G161900 Sobic002G161900 Sobic009G221000--Sobic002G161900 Sobic008G027000 Sobic008G027000 Sobic009G221000--Sobic008G027000 Sobic003G113200 Sobic003G113200 Sobic009G221000--Sobic003G113200 Sobic008G185300 Sobic008G185300 Sobic009G221000--Sobic008G185300 Sobic001G085300 Sobic001G085300 Sobic007G183400--Sobic001G085300 Sobic001G390800 Sobic001G390800 Sobic007G183400--Sobic001G390800 Sobic001G178700 Sobic001G178700 Sobic007G183400--Sobic001G178700 Sobic010G001500 Sobic010G001500 Sobic007G183400--Sobic010G001500 Sobic002G430000 Sobic002G430000 Sobic007G183400--Sobic002G430000 Sobic007G004500 Sobic007G004500 Sobic007G183400--Sobic007G004500 Sobic004G355000 Sobic004G355000 Sobic007G183400--Sobic004G355000 Sobic004G113400 Sobic004G113400 Sobic007G183400--Sobic004G113400 Sobic004G065000 Sobic004G065000 Sobic007G183400--Sobic004G065000 Sobic004G181700 Sobic004G181700 Sobic009G097200--Sobic004G181700 Sobic009G097200--Sobic005G075100 Sobic009G097250 Sobic009G097250 Sobic009G097200--Sobic009G097250 Sobic004G181600 Sobic004G181600 Sobic009G097200--Sobic004G181600 Sobic010G256700 Sobic010G256700 Sobic009G097200--Sobic010G256700 Sobic001G268200 Sobic001G268200 Sobic009G097200--Sobic001G268200 Sobic009G097200--Sobic010G239600 Sobic004G317100 Sobic004G317100 Sobic009G097200--Sobic004G317100 Sobic009G097200--Sobic007G193700 Sobic002G169633--Sobic001G072500 Sobic002G169633--Sobic005G032800 Sobic004G359800 Sobic004G359800 Sobic002G169633--Sobic004G359800 Sobic002G169633--Sobic004G263600 Sobic004G174200 Sobic004G174200 Sobic002G169633--Sobic004G174200 Sobic002G169633--Sobic010G239600 Sobic007G020500 Sobic007G020500 Sobic002G169633--Sobic007G020500 Sobic006G131500 Sobic006G131500 Sobic002G169633--Sobic006G131500 Sobic002G169633--Sobic007G193700 Sobic004G034900--Sobic001G289600 Sobic010G206900 Sobic010G206900 Sobic004G034900--Sobic010G206900 Sobic004G034900--Sobic010G010700 Sobic002G411600 Sobic002G411600 Sobic004G034900--Sobic002G411600 Sobic004G034900--Sobic001G540400 Sobic003G422500 Sobic003G422500 Sobic004G034900--Sobic003G422500 Sobic004G276400 Sobic004G276400 Sobic004G034900--Sobic004G276400 Sobic004G034900--Sobic002G008900 Sobic007G062800 Sobic007G062800 Sobic004G034900--Sobic007G062800
Octagon: transcription factors


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