Gene annotation
Transcriptome id Sobic.009G225900.2,Sobic.009G225900.1
Synonym Sb09g027930
Functional annotation 60S ribosomal protein L35a-3, putative, expressed
UniProt C5YVD8
Pfam PF01247
Panther DB PTHR10902 PTHR10902:SF4
NCBI CDD KOG0887; 60S ribosomal protein L35A/L37
KEGG Orthology K02917; RP-L35Ae, large subunit ribosomal protein L35Ae
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT1G74270 : Ribosomal protein L35Ae family protein
RAP-DB (Rice) LOC_Os05g48220.2 : 60S ribosomal protein L35a-3, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK02072 , KQK02071 , KQK04982
Barley HORVU7Hr1G031850.6 , HORVU7Hr1G031850.4 , HORVU7Hr1G031850.5 , HORVU7Hr1G031850.2 , HORVU7Hr1G031850.3 , HORVU7Hr1G031850.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G018900 avr9/Cf-9 rapidly elicited protein 137, putative, expressed -
2 Sobic.009G050100 ATKINESIN-13A/KINESIN-13A, putative, expressed K11091: U1 small nuclear ribonucleoprotein A
3 Sobic.007G216600 protein phosphatase 2C, putative, expressed -
4 Sobic.004G249700 plastocyanin-like domain containing protein, putative, expressed -
5 Sobic.006G177100 expressed protein K03671: thioredoxin 1
6 Sobic.004G107900 bZIP transcription factor family protein, putative, expressed -
7 Sobic.004G244800 ribosomal protein, putative, expressed K02995: RP-S8e, small subunit ribosomal protein S8e
8 Sobic.001G462100 MFP1 attachment factor 1, putative, expressed -
9 Sobic.001G239400 hsp20/alpha crystallin family protein, putative, expressed -
10 Sobic.004G210101 - -
11 Sobic.010G097400 thiol-disulphide oxidoreductase DCC, putative, expressed -
12 Sobic.001G005000 receptor protein kinase, putative, expressed -
13 Sobic.008G172100 ribosomal protein, putative, expressed K02874: RP-L14, MRPL14, large subunit ribosomal protein L14
14 Sobic.008G088600 expressed protein -
15 Sobic.010G194500 expansin precursor, putative, expressed -
16 Sobic.004G099500 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
17 Sobic.003G338966 - -
18 Sobic.001G172800 RNA recognition motif containing protein, putative, expressed K09564: peptidyl-prolyl isomerase E (cyclophilin E)
19 Sobic.001G210700 HNH endonuclease domain-containing protein, putative, expressed -
20 Sobic.004G300600 protein kinase domain containing protein, expressed -


Gene co-expression network
sample Sobic009G225900 Sobic009G225900 Sobic006G018900 Sobic006G018900 Sobic009G225900--Sobic006G018900 Sobic009G050100 Sobic009G050100 Sobic009G225900--Sobic009G050100 Sobic007G216600 Sobic007G216600 Sobic009G225900--Sobic007G216600 Sobic004G249700 Sobic004G249700 Sobic009G225900--Sobic004G249700 Sobic006G177100 Sobic006G177100 Sobic009G225900--Sobic006G177100 Sobic004G107900 Sobic004G107900 Sobic009G225900--Sobic004G107900 Sobic004G244800 Sobic004G244800 Sobic009G225900--Sobic004G244800 Sobic001G462100 Sobic001G462100 Sobic009G225900--Sobic001G462100 Sobic001G239400 Sobic001G239400 Sobic009G225900--Sobic001G239400 Sobic010G194500 Sobic010G194500 Sobic006G018900--Sobic010G194500 Sobic001G005000 Sobic001G005000 Sobic006G018900--Sobic001G005000 Sobic004G153700 Sobic004G153700 Sobic006G018900--Sobic004G153700 Sobic006G018900--Sobic004G107900 Sobic009G076800 Sobic009G076800 Sobic006G018900--Sobic009G076800 Sobic010G014300 Sobic010G014300 Sobic006G018900--Sobic010G014300 Sobic007G092300 Sobic007G092300 Sobic006G018900--Sobic007G092300 Sobic006G003000 Sobic006G003000 Sobic006G018900--Sobic006G003000 Sobic006G018900--Sobic001G239400 Sobic003G284500 Sobic003G284500 Sobic009G050100--Sobic003G284500 Sobic001G150800 Sobic001G150800 Sobic009G050100--Sobic001G150800 Sobic003G128500 Sobic003G128500 Sobic009G050100--Sobic003G128500 Sobic009G050100--Sobic006G177100 Sobic002G270100 Sobic002G270100 Sobic009G050100--Sobic002G270100 Sobic010G097400 Sobic010G097400 Sobic009G050100--Sobic010G097400 Sobic003G377200 Sobic003G377200 Sobic009G050100--Sobic003G377200 Sobic003G148500 Sobic003G148500 Sobic009G050100--Sobic003G148500 Sobic001G210700 Sobic001G210700 Sobic009G050100--Sobic001G210700 Sobic007G073600 Sobic007G073600 Sobic007G216600--Sobic007G073600 Sobic010G163900 Sobic010G163900 Sobic007G216600--Sobic010G163900 Sobic007G009000 Sobic007G009000 Sobic007G216600--Sobic007G009000 Sobic009G036900 Sobic009G036900 Sobic007G216600--Sobic009G036900 Sobic001G030400 Sobic001G030400 Sobic007G216600--Sobic001G030400 Sobic007G216600--Sobic009G225900 Sobic002G219800 Sobic002G219800 Sobic007G216600--Sobic002G219800 Sobic001G397700 Sobic001G397700 Sobic007G216600--Sobic001G397700 Sobic010G095600 Sobic010G095600 Sobic007G216600--Sobic010G095600 Sobic004G249700--Sobic001G239400 Sobic004G249700--Sobic001G005000 Sobic004G249700--Sobic010G194500 Sobic009G008300 Sobic009G008300 Sobic004G249700--Sobic009G008300 Sobic007G133600 Sobic007G133600 Sobic004G249700--Sobic007G133600 Sobic004G249700--Sobic009G076800 Sobic006G166700 Sobic006G166700 Sobic004G249700--Sobic006G166700 Sobic004G249700--Sobic004G107900 Sobic004G249700--Sobic006G018900 Sobic006G177100--Sobic010G097400 Sobic002G339400 Sobic002G339400 Sobic006G177100--Sobic002G339400 Sobic004G288400 Sobic004G288400 Sobic006G177100--Sobic004G288400 Sobic002G366700 Sobic002G366700 Sobic006G177100--Sobic002G366700 Sobic006G177100--Sobic010G014300 Sobic006G177100--Sobic009G050100 Sobic001G494150 Sobic001G494150 Sobic006G177100--Sobic001G494150 Sobic006G177100--Sobic003G284500 Sobic006G258400 Sobic006G258400 Sobic006G177100--Sobic006G258400 Sobic004G107900--Sobic006G018900 Sobic004G107900--Sobic001G462100 Sobic004G107900--Sobic001G005000 Sobic004G107900--Sobic004G249700 Sobic004G107900--Sobic010G014300 Sobic004G107900--Sobic001G397700 Sobic004G107900--Sobic001G239400 Sobic004G107900--Sobic006G166700 Sobic004G300600 Sobic004G300600 Sobic004G107900--Sobic004G300600 Sobic006G057200 Sobic006G057200 Sobic004G244800--Sobic006G057200 Sobic002G179300 Sobic002G179300 Sobic004G244800--Sobic002G179300 Sobic010G069400 Sobic010G069400 Sobic004G244800--Sobic010G069400 Sobic001G510800 Sobic001G510800 Sobic004G244800--Sobic001G510800 Sobic001G225700 Sobic001G225700 Sobic004G244800--Sobic001G225700 Sobic008G108601 Sobic008G108601 Sobic004G244800--Sobic008G108601 Sobic008G135000 Sobic008G135000 Sobic004G244800--Sobic008G135000 Sobic001G175300 Sobic001G175300 Sobic004G244800--Sobic001G175300 Sobic002G049300 Sobic002G049300 Sobic004G244800--Sobic002G049300 Sobic001G462100--Sobic001G005000 Sobic001G462100--Sobic006G018900 Sobic001G462100--Sobic004G107900 Sobic001G462100--Sobic006G166700 Sobic001G462100--Sobic010G014300 Sobic001G462100--Sobic010G194500 Sobic007G206700 Sobic007G206700 Sobic001G462100--Sobic007G206700 Sobic009G190400 Sobic009G190400 Sobic001G462100--Sobic009G190400 Sobic001G462100--Sobic009G076800 Sobic001G239400--Sobic001G005000 Sobic001G239400--Sobic007G133600 Sobic001G239400--Sobic004G249700 Sobic001G239400--Sobic006G166700 Sobic001G239400--Sobic004G288400 Sobic001G239400--Sobic009G008300 Sobic001G239400--Sobic009G076800 Sobic001G239400--Sobic010G194500 Sobic001G239400--Sobic006G003000
Octagon: transcription factors


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