Gene annotation
Transcriptome id Sobic.010G057500.2
Synonym
Functional annotation expressed protein
UniProt A0A1W0VRL4
Pfam PF12231
Panther DB PTHR22928
NCBI CDD -
KEGG Orthology K11138; telomere-associated protein RIF1
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g07620.1 : expressed protein
MaizeGDB (Corn) Zm00025a049867
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G243600 AAA-type ATPase family protein, putative, expressed -
2 Sobic.003G217200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
3 Sobic.008G002300 ATSIZ1/SIZ1, putative, expressed -
4 Sobic.002G105700 protein binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins
5 Sobic.010G027900 - -
6 Sobic.002G371600 Spc97 / Spc98 family protein, putative, expressed K16572: TUBGCP5, gamma-tubulin complex component 5
7 Sobic.002G374300 FAR1 family protein, expressed K17604: zinc finger SWIM domain-containing protein 3
8 Sobic.003G388000 tetratricopeptide repeat domain containing protein, expressed K03350: APC3, anaphase-promoting complex subunit 3
9 Sobic.002G308700 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
10 Sobic.007G018400 expressed protein -
11 Sobic.008G111200 - -
12 Sobic.001G340000 zinc finger, C3HC4 type domain containing protein, expressed K10696: E3 ubiquitin-protein ligase BRE1
13 Sobic.006G032300 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12
14 Sobic.004G053500 HEAT repeat family protein, putative, expressed K17263: CAND1, cullin-associated NEDD8-dissociated protein 1
15 Sobic.002G031900 RFC1 - Putative clamp loader of PCNA, replication factor C subunit 1, expressed -
16 Sobic.010G186100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
17 Sobic.002G405200 AMP deaminase, putative, expressed K01488: add, adenosine deaminase
18 Sobic.003G330900 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
19 Sobic.003G101700 dnaJ domain containing protein, expressed -
20 Sobic.005G061900 - K10896: fanconi anemia group M protein


Gene co-expression network
sample Sobic010G057500 Sobic010G057500 Sobic004G243600 Sobic004G243600 Sobic010G057500--Sobic004G243600 Sobic003G217200 Sobic003G217200 Sobic010G057500--Sobic003G217200 Sobic008G002300 Sobic008G002300 Sobic010G057500--Sobic008G002300 Sobic002G105700 Sobic002G105700 Sobic010G057500--Sobic002G105700 Sobic010G027900 Sobic010G027900 Sobic010G057500--Sobic010G027900 Sobic002G371600 Sobic002G371600 Sobic010G057500--Sobic002G371600 Sobic002G374300 Sobic002G374300 Sobic010G057500--Sobic002G374300 Sobic003G388000 Sobic003G388000 Sobic010G057500--Sobic003G388000 Sobic002G308700 Sobic002G308700 Sobic010G057500--Sobic002G308700 Sobic004G243600--Sobic002G374300 Sobic008G054000 Sobic008G054000 Sobic004G243600--Sobic008G054000 Sobic004G243600--Sobic010G057500 Sobic006G019300 Sobic006G019300 Sobic004G243600--Sobic006G019300 Sobic004G243600--Sobic008G002300 Sobic010G183300 Sobic010G183300 Sobic004G243600--Sobic010G183300 Sobic004G344000 Sobic004G344000 Sobic004G243600--Sobic004G344000 Sobic001G178300 Sobic001G178300 Sobic004G243600--Sobic001G178300 Sobic004G243600--Sobic002G105700 Sobic001G542450 Sobic001G542450 Sobic003G217200--Sobic001G542450 Sobic003G052800 Sobic003G052800 Sobic003G217200--Sobic003G052800 Sobic003G217200--Sobic002G371600 Sobic006G269800 Sobic006G269800 Sobic003G217200--Sobic006G269800 Sobic003G217200--Sobic002G374300 Sobic008G088875 Sobic008G088875 Sobic003G217200--Sobic008G088875 Sobic001G087600 Sobic001G087600 Sobic003G217200--Sobic001G087600 Sobic001G346900 Sobic001G346900 Sobic003G217200--Sobic001G346900 Sobic002G372500 Sobic002G372500 Sobic003G217200--Sobic002G372500 Sobic007G000200 Sobic007G000200 Sobic008G002300--Sobic007G000200 Sobic008G002300--Sobic001G542450 Sobic006G088200 Sobic006G088200 Sobic008G002300--Sobic006G088200 Sobic008G002300--Sobic001G178300 Sobic006G032300 Sobic006G032300 Sobic008G002300--Sobic006G032300 Sobic002G029100 Sobic002G029100 Sobic008G002300--Sobic002G029100 Sobic002G256700 Sobic002G256700 Sobic008G002300--Sobic002G256700 Sobic002G245000 Sobic002G245000 Sobic008G002300--Sobic002G245000 Sobic001G493700 Sobic001G493700 Sobic008G002300--Sobic001G493700 Sobic004G267900 Sobic004G267900 Sobic002G105700--Sobic004G267900 Sobic002G105700--Sobic004G243600 Sobic002G405200 Sobic002G405200 Sobic002G105700--Sobic002G405200 Sobic002G105700--Sobic010G057500 Sobic002G105700--Sobic002G374300 Sobic002G105700--Sobic010G027900 Sobic002G105700--Sobic006G019300 Sobic007G018400 Sobic007G018400 Sobic002G105700--Sobic007G018400 Sobic007G103500 Sobic007G103500 Sobic002G105700--Sobic007G103500 Sobic001G191700 Sobic001G191700 Sobic010G027900--Sobic001G191700 Sobic010G027900--Sobic003G217200 Sobic001G063700 Sobic001G063700 Sobic010G027900--Sobic001G063700 Sobic001G299700 Sobic001G299700 Sobic010G027900--Sobic001G299700 Sobic010G027900--Sobic002G105700 Sobic004G332400 Sobic004G332400 Sobic010G027900--Sobic004G332400 Sobic006G040800 Sobic006G040800 Sobic010G027900--Sobic006G040800 Sobic004G123400 Sobic004G123400 Sobic010G027900--Sobic004G123400 Sobic001G400500 Sobic001G400500 Sobic010G027900--Sobic001G400500 Sobic001G373800 Sobic001G373800 Sobic002G371600--Sobic001G373800 Sobic006G029100 Sobic006G029100 Sobic002G371600--Sobic006G029100 Sobic006G245900 Sobic006G245900 Sobic002G371600--Sobic006G245900 Sobic004G356200 Sobic004G356200 Sobic002G371600--Sobic004G356200 Sobic003G308500 Sobic003G308500 Sobic002G371600--Sobic003G308500 Sobic002G160700 Sobic002G160700 Sobic002G371600--Sobic002G160700 Sobic002G371600--Sobic003G052800 Sobic001G451300 Sobic001G451300 Sobic002G371600--Sobic001G451300 Sobic010G262100 Sobic010G262100 Sobic002G371600--Sobic010G262100 Sobic003G363700 Sobic003G363700 Sobic002G374300--Sobic003G363700 Sobic003G043000 Sobic003G043000 Sobic002G374300--Sobic003G043000 Sobic002G374300--Sobic001G542450 Sobic003G012000 Sobic003G012000 Sobic002G374300--Sobic003G012000 Sobic002G154000 Sobic002G154000 Sobic002G374300--Sobic002G154000 Sobic001G151100 Sobic001G151100 Sobic002G374300--Sobic001G151100 Sobic004G209700 Sobic004G209700 Sobic002G374300--Sobic004G209700 Sobic001G393900 Sobic001G393900 Sobic002G374300--Sobic001G393900 Sobic002G371700 Sobic002G371700 Sobic002G374300--Sobic002G371700 Sobic003G388000--Sobic002G371600 Sobic004G322300 Sobic004G322300 Sobic003G388000--Sobic004G322300 Sobic003G388000--Sobic002G160700 Sobic004G030400 Sobic004G030400 Sobic003G388000--Sobic004G030400 Sobic004G177600 Sobic004G177600 Sobic003G388000--Sobic004G177600 Sobic003G396700 Sobic003G396700 Sobic003G388000--Sobic003G396700 Sobic010G188000 Sobic010G188000 Sobic003G388000--Sobic010G188000 Sobic001G340000 Sobic001G340000 Sobic003G388000--Sobic001G340000 Sobic001G475000 Sobic001G475000 Sobic003G388000--Sobic001G475000 Sobic003G186000 Sobic003G186000 Sobic002G308700--Sobic003G186000 Sobic004G276400 Sobic004G276400 Sobic002G308700--Sobic004G276400 Sobic005G162500 Sobic005G162500 Sobic002G308700--Sobic005G162500 Sobic010G105200 Sobic010G105200 Sobic002G308700--Sobic010G105200 Sobic004G334300 Sobic004G334300 Sobic002G308700--Sobic004G334300 Sobic002G133300 Sobic002G133300 Sobic002G308700--Sobic002G133300 Sobic001G457800 Sobic001G457800 Sobic002G308700--Sobic001G457800 Sobic002G308700--Sobic001G151100 Sobic002G316600 Sobic002G316600 Sobic002G308700--Sobic002G316600
Octagon: transcription factors


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