Gene annotation
Transcriptome id Sobic.002G105700.1
Synonym Sb02g009010
Functional annotation protein binding protein, putative, expressed
UniProt C5X3K2
Pfam PF13920
Panther DB PTHR10044 PTHR10044:SF112
NCBI CDD KOG1100; Predicted E3 ubiquitin ligase
KEGG Orthology K19042; E3 ubiquitin-protein ligase BOI and related proteins
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G35070 : SBP (S-ribonuclease binding protein) family protein
RAP-DB (Rice) LOC_Os07g17370.1 : expressed protein
MaizeGDB (Corn) Zm00025a045599
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G267900 expressed protein K10756: replication factor C subunit 3/5
2 Sobic.004G243600 AAA-type ATPase family protein, putative, expressed -
3 Sobic.002G405200 AMP deaminase, putative, expressed K01488: add, adenosine deaminase
4 Sobic.010G057500 expressed protein K11138: telomere-associated protein RIF1
5 Sobic.002G374300 FAR1 family protein, expressed K17604: zinc finger SWIM domain-containing protein 3
6 Sobic.010G027900 - -
7 Sobic.006G019300 F-box-like/WD repeat-containing protein TBL1XR1-A, putative, expressed K04508: transducin (beta)-like 1
8 Sobic.007G018400 expressed protein -
9 Sobic.007G103500 - -
10 Sobic.001G501800 ZOS1-20 - C2H2 zinc finger protein, expressed -
11 Sobic.003G101700 dnaJ domain containing protein, expressed -
12 Sobic.002G043100 histone deacetylase, putative, expressed K11407: histone deacetylase 6
13 Sobic.003G288800 phosphoesterase, putative, expressed K08073: bifunctional polynucleotide phosphatase/kinase
14 Sobic.010G038100 OsFBDUF30 - F-box and DUF domain containing protein, expressed -
15 Sobic.003G330900 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
16 Sobic.006G031300 eukaryotic aspartyl protease domain containing protein, expressed -
17 Sobic.008G054000 tRNA nucleotidyltransferase/polyA polymerase family protein, putative, expressed -
18 Sobic.010G079500 PHD-finger domain containing protein, putative, expressed -
19 Sobic.003G217200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
20 Sobic.003G433300 DNA mismatch repair protein Mlh1, putative, expressed K08734: DNA mismatch repair protein MLH1


Gene co-expression network
sample Sobic002G105700 Sobic002G105700 Sobic004G267900 Sobic004G267900 Sobic002G105700--Sobic004G267900 Sobic004G243600 Sobic004G243600 Sobic002G105700--Sobic004G243600 Sobic002G405200 Sobic002G405200 Sobic002G105700--Sobic002G405200 Sobic010G057500 Sobic010G057500 Sobic002G105700--Sobic010G057500 Sobic002G374300 Sobic002G374300 Sobic002G105700--Sobic002G374300 Sobic010G027900 Sobic010G027900 Sobic002G105700--Sobic010G027900 Sobic006G019300 Sobic006G019300 Sobic002G105700--Sobic006G019300 Sobic007G018400 Sobic007G018400 Sobic002G105700--Sobic007G018400 Sobic007G103500 Sobic007G103500 Sobic002G105700--Sobic007G103500 Sobic004G267900--Sobic002G105700 Sobic004G267900--Sobic004G243600 Sobic003G186900 Sobic003G186900 Sobic004G267900--Sobic003G186900 Sobic010G132600 Sobic010G132600 Sobic004G267900--Sobic010G132600 Sobic010G038100 Sobic010G038100 Sobic004G267900--Sobic010G038100 Sobic008G054000 Sobic008G054000 Sobic004G267900--Sobic008G054000 Sobic003G101700 Sobic003G101700 Sobic004G267900--Sobic003G101700 Sobic010G135250 Sobic010G135250 Sobic004G267900--Sobic010G135250 Sobic006G119400 Sobic006G119400 Sobic004G267900--Sobic006G119400 Sobic004G243600--Sobic002G374300 Sobic004G243600--Sobic008G054000 Sobic004G243600--Sobic010G057500 Sobic004G243600--Sobic006G019300 Sobic008G002300 Sobic008G002300 Sobic004G243600--Sobic008G002300 Sobic010G183300 Sobic010G183300 Sobic004G243600--Sobic010G183300 Sobic004G344000 Sobic004G344000 Sobic004G243600--Sobic004G344000 Sobic001G178300 Sobic001G178300 Sobic004G243600--Sobic001G178300 Sobic004G243600--Sobic002G105700 Sobic001G430400 Sobic001G430400 Sobic002G405200--Sobic001G430400 Sobic006G188500 Sobic006G188500 Sobic002G405200--Sobic006G188500 Sobic002G405200--Sobic008G002300 Sobic002G405200--Sobic002G105700 Sobic002G405200--Sobic001G178300 Sobic006G088200 Sobic006G088200 Sobic002G405200--Sobic006G088200 Sobic008G132900 Sobic008G132900 Sobic002G405200--Sobic008G132900 Sobic002G405200--Sobic002G374300 Sobic010G089800 Sobic010G089800 Sobic002G405200--Sobic010G089800 Sobic010G057500--Sobic004G243600 Sobic003G217200 Sobic003G217200 Sobic010G057500--Sobic003G217200 Sobic010G057500--Sobic008G002300 Sobic010G057500--Sobic002G105700 Sobic010G057500--Sobic010G027900 Sobic002G371600 Sobic002G371600 Sobic010G057500--Sobic002G371600 Sobic010G057500--Sobic002G374300 Sobic003G388000 Sobic003G388000 Sobic010G057500--Sobic003G388000 Sobic002G308700 Sobic002G308700 Sobic010G057500--Sobic002G308700 Sobic003G363700 Sobic003G363700 Sobic002G374300--Sobic003G363700 Sobic003G043000 Sobic003G043000 Sobic002G374300--Sobic003G043000 Sobic001G542450 Sobic001G542450 Sobic002G374300--Sobic001G542450 Sobic003G012000 Sobic003G012000 Sobic002G374300--Sobic003G012000 Sobic002G154000 Sobic002G154000 Sobic002G374300--Sobic002G154000 Sobic001G151100 Sobic001G151100 Sobic002G374300--Sobic001G151100 Sobic004G209700 Sobic004G209700 Sobic002G374300--Sobic004G209700 Sobic001G393900 Sobic001G393900 Sobic002G374300--Sobic001G393900 Sobic002G371700 Sobic002G371700 Sobic002G374300--Sobic002G371700 Sobic001G191700 Sobic001G191700 Sobic010G027900--Sobic001G191700 Sobic010G027900--Sobic003G217200 Sobic001G063700 Sobic001G063700 Sobic010G027900--Sobic001G063700 Sobic001G299700 Sobic001G299700 Sobic010G027900--Sobic001G299700 Sobic010G027900--Sobic002G105700 Sobic004G332400 Sobic004G332400 Sobic010G027900--Sobic004G332400 Sobic006G040800 Sobic006G040800 Sobic010G027900--Sobic006G040800 Sobic004G123400 Sobic004G123400 Sobic010G027900--Sobic004G123400 Sobic001G400500 Sobic001G400500 Sobic010G027900--Sobic001G400500 Sobic005G100700 Sobic005G100700 Sobic006G019300--Sobic005G100700 Sobic006G019300--Sobic002G374300 Sobic006G056700 Sobic006G056700 Sobic006G019300--Sobic006G056700 Sobic001G501800 Sobic001G501800 Sobic006G019300--Sobic001G501800 Sobic006G019300--Sobic004G243600 Sobic001G456300 Sobic001G456300 Sobic006G019300--Sobic001G456300 Sobic004G317300 Sobic004G317300 Sobic006G019300--Sobic004G317300 Sobic005G200800 Sobic005G200800 Sobic006G019300--Sobic005G200800 Sobic003G360400 Sobic003G360400 Sobic006G019300--Sobic003G360400 Sobic006G032300 Sobic006G032300 Sobic007G018400--Sobic006G032300 Sobic001G542400 Sobic001G542400 Sobic007G018400--Sobic001G542400 Sobic007G018400--Sobic002G154000 Sobic007G018400--Sobic001G191700 Sobic007G018400--Sobic001G299700 Sobic007G018400--Sobic001G400500 Sobic007G018400--Sobic003G043000 Sobic002G399800 Sobic002G399800 Sobic007G018400--Sobic002G399800 Sobic004G053500 Sobic004G053500 Sobic007G018400--Sobic004G053500 Sobic007G103500--Sobic002G105700 Sobic002G043100 Sobic002G043100 Sobic007G103500--Sobic002G043100 Sobic010G094700 Sobic010G094700 Sobic007G103500--Sobic010G094700 Sobic007G103500--Sobic002G405200 Sobic003G052800 Sobic003G052800 Sobic007G103500--Sobic003G052800 Sobic006G269800 Sobic006G269800 Sobic007G103500--Sobic006G269800 Sobic004G107200 Sobic004G107200 Sobic007G103500--Sobic004G107200 Sobic010G016600 Sobic010G016600 Sobic007G103500--Sobic010G016600 Sobic007G103500--Sobic001G501800
Octagon: transcription factors


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