Gene annotation
Transcriptome id Sobic.003G330900.1
Synonym SUVH1, Sb03g037660
Functional annotation histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed
UniProt C5XN45
Pfam PF05033 PF00856 PF02182
Panther DB PTHR22884 PTHR22884:SF384
NCBI CDD KOG1082; Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing
KEGG Orthology K11420; [histone H3]-lysine9 N-trimethyltransferase EHMT
Gene Ontology GO:0018024; histone-lysine N-methyltransferase activity GO:0008270zinc ion binding GO:0005634nucleus GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT5G04940 : SU(VAR)3-9 homolog 1
RAP-DB (Rice) LOC_Os01g59620.1 : histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed
MaizeGDB (Corn) Zm00025a037831 , Zm00025a027138
Brachypodium KQJ89478 , KQJ89479
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G330900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G239800 3-5 exonuclease family protein, putative, expressed K12591: RRP6, exosome complex exonuclease RRP6
2 Sobic.001G440100 cell cycle checkpoint protein RAD17, putative, expressed K06662: HRAD17, cell cycle checkpoint protein
3 Sobic.001G052400 RNA recognition motif containing protein, putative, expressed K14573: NOP4, nucleolar protein 4
4 Sobic.004G006600 transcription factor jumonji, putative, expressed K15601: [histone H3]-dimethyl-L-lysine9 demethylase
5 Sobic.002G374300 FAR1 family protein, expressed K17604: zinc finger SWIM domain-containing protein 3
6 Sobic.006G125900 elongator complex protein 3, putative, expressed K07739: ELP3, elongator complex protein 3
7 Sobic.004G315500 RFC5 - Putative clamp loader of PCNA, replication factor C subunit 5, expressed K10756: replication factor C subunit 3/5
8 Sobic.010G038100 OsFBDUF30 - F-box and DUF domain containing protein, expressed -
9 Sobic.001G501800 ZOS1-20 - C2H2 zinc finger protein, expressed -
10 Sobic.010G233000 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
11 Sobic.003G309050 - -
12 Sobic.010G215900 type II intron maturase protein, putative, expressed -
13 Sobic.003G101700 dnaJ domain containing protein, expressed -
14 Sobic.003G409200 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
15 Sobic.002G052700 cyclophilin, putative, expressed K09566: peptidyl-prolyl isomerase G (cyclophilin G)
16 Sobic.004G111000 bromodomain containing protein, expressed -
17 Sobic.004G030800 expressed protein -
18 Sobic.001G098400 expressed protein K16278: E3 ubiquitin-protein ligase HOS1
19 Sobic.010G130100 BAH domain containing protein, expressed -
20 Sobic.002G318800 - K14776: DDX10, ATP-dependent RNA helicase DDX10/DBP4


Gene co-expression network
sample Sobic003G330900 Sobic003G330900 Sobic001G239800 Sobic001G239800 Sobic003G330900--Sobic001G239800 Sobic001G440100 Sobic001G440100 Sobic003G330900--Sobic001G440100 Sobic001G052400 Sobic001G052400 Sobic003G330900--Sobic001G052400 Sobic004G006600 Sobic004G006600 Sobic003G330900--Sobic004G006600 Sobic002G374300 Sobic002G374300 Sobic003G330900--Sobic002G374300 Sobic006G125900 Sobic006G125900 Sobic003G330900--Sobic006G125900 Sobic004G315500 Sobic004G315500 Sobic003G330900--Sobic004G315500 Sobic010G038100 Sobic010G038100 Sobic003G330900--Sobic010G038100 Sobic001G501800 Sobic001G501800 Sobic003G330900--Sobic001G501800 Sobic006G112700 Sobic006G112700 Sobic001G239800--Sobic006G112700 Sobic003G123100 Sobic003G123100 Sobic001G239800--Sobic003G123100 Sobic002G318800 Sobic002G318800 Sobic001G239800--Sobic002G318800 Sobic001G239800--Sobic003G330900 Sobic001G536000 Sobic001G536000 Sobic001G239800--Sobic001G536000 Sobic002G252100 Sobic002G252100 Sobic001G239800--Sobic002G252100 Sobic007G014800 Sobic007G014800 Sobic001G239800--Sobic007G014800 Sobic001G239800--Sobic006G125900 Sobic001G239800--Sobic004G315500 Sobic001G440100--Sobic003G330900 Sobic001G440100--Sobic010G038100 Sobic001G440100--Sobic002G252100 Sobic001G440100--Sobic006G112700 Sobic001G440100--Sobic001G239800 Sobic010G026600 Sobic010G026600 Sobic001G440100--Sobic010G026600 Sobic006G236000 Sobic006G236000 Sobic001G440100--Sobic006G236000 Sobic001G440100--Sobic003G123100 Sobic004G215900 Sobic004G215900 Sobic001G440100--Sobic004G215900 Sobic004G320500 Sobic004G320500 Sobic001G052400--Sobic004G320500 Sobic010G003400 Sobic010G003400 Sobic001G052400--Sobic010G003400 Sobic001G453400 Sobic001G453400 Sobic001G052400--Sobic001G453400 Sobic007G217100 Sobic007G217100 Sobic001G052400--Sobic007G217100 Sobic003G042400 Sobic003G042400 Sobic001G052400--Sobic003G042400 Sobic004G340400 Sobic004G340400 Sobic001G052400--Sobic004G340400 Sobic006G086600 Sobic006G086600 Sobic001G052400--Sobic006G086600 Sobic010G174700 Sobic010G174700 Sobic001G052400--Sobic010G174700 Sobic001G052400--Sobic006G125900 Sobic010G233000 Sobic010G233000 Sobic004G006600--Sobic010G233000 Sobic002G263200 Sobic002G263200 Sobic004G006600--Sobic002G263200 Sobic010G186600 Sobic010G186600 Sobic004G006600--Sobic010G186600 Sobic001G098400 Sobic001G098400 Sobic004G006600--Sobic001G098400 Sobic001G373000 Sobic001G373000 Sobic004G006600--Sobic001G373000 Sobic004G006600--Sobic003G330900 Sobic006G188500 Sobic006G188500 Sobic004G006600--Sobic006G188500 Sobic009G255600 Sobic009G255600 Sobic004G006600--Sobic009G255600 Sobic004G006600--Sobic004G315500 Sobic003G363700 Sobic003G363700 Sobic002G374300--Sobic003G363700 Sobic003G043000 Sobic003G043000 Sobic002G374300--Sobic003G043000 Sobic001G542450 Sobic001G542450 Sobic002G374300--Sobic001G542450 Sobic003G012000 Sobic003G012000 Sobic002G374300--Sobic003G012000 Sobic002G154000 Sobic002G154000 Sobic002G374300--Sobic002G154000 Sobic001G151100 Sobic001G151100 Sobic002G374300--Sobic001G151100 Sobic004G209700 Sobic004G209700 Sobic002G374300--Sobic004G209700 Sobic001G393900 Sobic001G393900 Sobic002G374300--Sobic001G393900 Sobic002G371700 Sobic002G371700 Sobic002G374300--Sobic002G371700 Sobic006G125900--Sobic001G453400 Sobic001G145400 Sobic001G145400 Sobic006G125900--Sobic001G145400 Sobic006G125900--Sobic001G052400 Sobic008G051200 Sobic008G051200 Sobic006G125900--Sobic008G051200 Sobic006G125900--Sobic010G174700 Sobic001G429600 Sobic001G429600 Sobic006G125900--Sobic001G429600 Sobic006G125900--Sobic004G340400 Sobic006G125900--Sobic007G217100 Sobic006G125900--Sobic010G003400 Sobic001G488100 Sobic001G488100 Sobic004G315500--Sobic001G488100 Sobic005G010900 Sobic005G010900 Sobic004G315500--Sobic005G010900 Sobic004G315500--Sobic001G373000 Sobic010G188000 Sobic010G188000 Sobic004G315500--Sobic010G188000 Sobic004G322300 Sobic004G322300 Sobic004G315500--Sobic004G322300 Sobic006G137700 Sobic006G137700 Sobic004G315500--Sobic006G137700 Sobic004G315500--Sobic001G239800 Sobic007G089800 Sobic007G089800 Sobic004G315500--Sobic007G089800 Sobic004G315500--Sobic003G123100 Sobic005G200900 Sobic005G200900 Sobic010G038100--Sobic005G200900 Sobic010G038100--Sobic010G026600 Sobic010G038100--Sobic001G440100 Sobic004G235300 Sobic004G235300 Sobic010G038100--Sobic004G235300 Sobic006G080400 Sobic006G080400 Sobic010G038100--Sobic006G080400 Sobic008G002500 Sobic008G002500 Sobic010G038100--Sobic008G002500 Sobic010G038100--Sobic001G501800 Sobic003G101700 Sobic003G101700 Sobic010G038100--Sobic003G101700 Sobic009G185700 Sobic009G185700 Sobic010G038100--Sobic009G185700 Sobic002G043100 Sobic002G043100 Sobic001G501800--Sobic002G043100 Sobic004G107200 Sobic004G107200 Sobic001G501800--Sobic004G107200 Sobic005G200800 Sobic005G200800 Sobic001G501800--Sobic005G200800 Sobic002G425500 Sobic002G425500 Sobic001G501800--Sobic002G425500 Sobic003G409200 Sobic003G409200 Sobic001G501800--Sobic003G409200 Sobic001G063700 Sobic001G063700 Sobic001G501800--Sobic001G063700 Sobic003G101500 Sobic003G101500 Sobic001G501800--Sobic003G101500 Sobic003G360400 Sobic003G360400 Sobic001G501800--Sobic003G360400 Sobic001G346900 Sobic001G346900 Sobic001G501800--Sobic001G346900
Octagon: transcription factors


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