Gene annotation
Transcriptome id Sobic.002G405200.1
Synonym Sb02g041950
Functional annotation AMP deaminase, putative, expressed
UniProt C5X4S2
Pfam PF00962
Panther DB PTHR11409 PTHR11409:SF42
NCBI CDD KOG1097; Adenine deaminase/adenosine deaminase
KEGG Orthology K01488; add, adenosine deaminase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G04880 : adenosine/AMP deaminase family protein
RAP-DB (Rice) LOC_Os07g46630.1 : AMP deaminase, putative, expressed
MaizeGDB (Corn) Zm00025a015359
Brachypodium KQK14826 , KQK14827 , KQK14824 , KQK14825 , KQK13629 , PNT74614 , PNT74615 , PNT74611 , PNT74612
Barley HORVU2Hr1G022360.10 , HORVU2Hr1G022360.13 , HORVU2Hr1G022360.12 , HORVU2Hr1G022360.14 , HORVU2Hr1G022360.9 , HORVU2Hr1G022360.8 , HORVU2Hr1G022360.5 , HORVU2Hr1G022360.4 , HORVU2Hr1G022360.7 , HORVU2Hr1G022360.6 , HORVU2Hr1G022360.1 , HORVU2Hr1G022360.3 , HORVU2Hr1G022360.2
Wheat TraesCS2A02G127600 , TraesCS2A02G127600 , TraesCS2D02G129900 , TraesCS2A02G127500 , TraesCS2D02G130200 , TraesCS2B02G149500 , TraesCS2D02G129800
Populus -


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cDNA sequences
Sobic.002G405200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G430400 Ser/Thr protein phosphatase family protein, putative, expressed -
2 Sobic.006G188500 uncharacterized mscS family protein, putative, expressed -
3 Sobic.008G002300 ATSIZ1/SIZ1, putative, expressed -
4 Sobic.002G105700 protein binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins
5 Sobic.001G178300 DNA-binding protein, putative, expressed -
6 Sobic.006G088200 nonsense-mediated decay UPF3, putative, expressed K14328: UPF3, regulator of nonsense transcripts 3
7 Sobic.008G132900 expressed protein -
8 Sobic.002G374300 FAR1 family protein, expressed K17604: zinc finger SWIM domain-containing protein 3
9 Sobic.010G089800 expressed protein -
10 Sobic.010G079500 PHD-finger domain containing protein, putative, expressed -
11 Sobic.007G018400 expressed protein -
12 Sobic.008G144900 DUF221 domain containing protein, expressed -
13 Sobic.003G330900 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
14 Sobic.003G101700 dnaJ domain containing protein, expressed -
15 Sobic.003G046300 ubiquitin carboxyl-terminal hydrolase 14, putative, expressed K11836: USP5_13, ubiquitin carboxyl-terminal hydrolase 5/13
16 Sobic.007G000200 expressed protein -
17 Sobic.008G054000 tRNA nucleotidyltransferase/polyA polymerase family protein, putative, expressed -
18 Sobic.006G250300 pelota, putative, expressed K06965: PELO, DOM34, protein pelota
19 Sobic.004G267900 expressed protein K10756: replication factor C subunit 3/5
20 Sobic.006G032300 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12


Gene co-expression network
sample Sobic002G405200 Sobic002G405200 Sobic001G430400 Sobic001G430400 Sobic002G405200--Sobic001G430400 Sobic006G188500 Sobic006G188500 Sobic002G405200--Sobic006G188500 Sobic008G002300 Sobic008G002300 Sobic002G405200--Sobic008G002300 Sobic002G105700 Sobic002G105700 Sobic002G405200--Sobic002G105700 Sobic001G178300 Sobic001G178300 Sobic002G405200--Sobic001G178300 Sobic006G088200 Sobic006G088200 Sobic002G405200--Sobic006G088200 Sobic008G132900 Sobic008G132900 Sobic002G405200--Sobic008G132900 Sobic002G374300 Sobic002G374300 Sobic002G405200--Sobic002G374300 Sobic010G089800 Sobic010G089800 Sobic002G405200--Sobic010G089800 Sobic002G256700 Sobic002G256700 Sobic001G430400--Sobic002G256700 Sobic008G144900 Sobic008G144900 Sobic001G430400--Sobic008G144900 Sobic008G087866 Sobic008G087866 Sobic001G430400--Sobic008G087866 Sobic001G191700 Sobic001G191700 Sobic001G430400--Sobic001G191700 Sobic001G117200 Sobic001G117200 Sobic001G430400--Sobic001G117200 Sobic006G032300 Sobic006G032300 Sobic001G430400--Sobic006G032300 Sobic007G000200 Sobic007G000200 Sobic001G430400--Sobic007G000200 Sobic001G277900 Sobic001G277900 Sobic001G430400--Sobic001G277900 Sobic002G371300 Sobic002G371300 Sobic001G430400--Sobic002G371300 Sobic003G046300 Sobic003G046300 Sobic006G188500--Sobic003G046300 Sobic006G188500--Sobic007G000200 Sobic009G003700 Sobic009G003700 Sobic006G188500--Sobic009G003700 Sobic009G234700 Sobic009G234700 Sobic006G188500--Sobic009G234700 Sobic001G488100 Sobic001G488100 Sobic006G188500--Sobic001G488100 Sobic001G487100 Sobic001G487100 Sobic006G188500--Sobic001G487100 Sobic005G175000 Sobic005G175000 Sobic006G188500--Sobic005G175000 Sobic004G006600 Sobic004G006600 Sobic006G188500--Sobic004G006600 Sobic001G462600 Sobic001G462600 Sobic006G188500--Sobic001G462600 Sobic008G002300--Sobic007G000200 Sobic001G542450 Sobic001G542450 Sobic008G002300--Sobic001G542450 Sobic008G002300--Sobic006G088200 Sobic008G002300--Sobic001G178300 Sobic008G002300--Sobic006G032300 Sobic002G029100 Sobic002G029100 Sobic008G002300--Sobic002G029100 Sobic008G002300--Sobic002G256700 Sobic002G245000 Sobic002G245000 Sobic008G002300--Sobic002G245000 Sobic001G493700 Sobic001G493700 Sobic008G002300--Sobic001G493700 Sobic004G267900 Sobic004G267900 Sobic002G105700--Sobic004G267900 Sobic004G243600 Sobic004G243600 Sobic002G105700--Sobic004G243600 Sobic002G105700--Sobic002G405200 Sobic010G057500 Sobic010G057500 Sobic002G105700--Sobic010G057500 Sobic002G105700--Sobic002G374300 Sobic010G027900 Sobic010G027900 Sobic002G105700--Sobic010G027900 Sobic006G019300 Sobic006G019300 Sobic002G105700--Sobic006G019300 Sobic007G018400 Sobic007G018400 Sobic002G105700--Sobic007G018400 Sobic007G103500 Sobic007G103500 Sobic002G105700--Sobic007G103500 Sobic001G178300--Sobic002G256700 Sobic001G178300--Sobic008G002300 Sobic006G250300 Sobic006G250300 Sobic001G178300--Sobic006G250300 Sobic004G131800 Sobic004G131800 Sobic001G178300--Sobic004G131800 Sobic001G178300--Sobic001G493700 Sobic001G178300--Sobic006G088200 Sobic001G275300 Sobic001G275300 Sobic001G178300--Sobic001G275300 Sobic006G056700 Sobic006G056700 Sobic001G178300--Sobic006G056700 Sobic001G537500 Sobic001G537500 Sobic001G178300--Sobic001G537500 Sobic003G095900 Sobic003G095900 Sobic006G088200--Sobic003G095900 Sobic003G360400 Sobic003G360400 Sobic006G088200--Sobic003G360400 Sobic006G088200--Sobic001G493700 Sobic006G088200--Sobic001G275300 Sobic002G133300 Sobic002G133300 Sobic006G088200--Sobic002G133300 Sobic003G379200 Sobic003G379200 Sobic006G088200--Sobic003G379200 Sobic003G214600 Sobic003G214600 Sobic006G088200--Sobic003G214600 Sobic001G433800 Sobic001G433800 Sobic006G088200--Sobic001G433800 Sobic001G227400 Sobic001G227400 Sobic006G088200--Sobic001G227400 Sobic009G256300 Sobic009G256300 Sobic008G132900--Sobic009G256300 Sobic009G109200 Sobic009G109200 Sobic008G132900--Sobic009G109200 Sobic001G400500 Sobic001G400500 Sobic008G132900--Sobic001G400500 Sobic010G079500 Sobic010G079500 Sobic008G132900--Sobic010G079500 Sobic010G112100 Sobic010G112100 Sobic008G132900--Sobic010G112100 Sobic001G542400 Sobic001G542400 Sobic008G132900--Sobic001G542400 Sobic010G105200 Sobic010G105200 Sobic008G132900--Sobic010G105200 Sobic010G094700 Sobic010G094700 Sobic008G132900--Sobic010G094700 Sobic010G001100 Sobic010G001100 Sobic008G132900--Sobic010G001100 Sobic003G363700 Sobic003G363700 Sobic002G374300--Sobic003G363700 Sobic003G043000 Sobic003G043000 Sobic002G374300--Sobic003G043000 Sobic002G374300--Sobic001G542450 Sobic003G012000 Sobic003G012000 Sobic002G374300--Sobic003G012000 Sobic002G154000 Sobic002G154000 Sobic002G374300--Sobic002G154000 Sobic001G151100 Sobic001G151100 Sobic002G374300--Sobic001G151100 Sobic004G209700 Sobic004G209700 Sobic002G374300--Sobic004G209700 Sobic001G393900 Sobic001G393900 Sobic002G374300--Sobic001G393900 Sobic002G371700 Sobic002G371700 Sobic002G374300--Sobic002G371700 Sobic006G080400 Sobic006G080400 Sobic010G089800--Sobic006G080400 Sobic010G205600 Sobic010G205600 Sobic010G089800--Sobic010G205600 Sobic006G036100 Sobic006G036100 Sobic010G089800--Sobic006G036100 Sobic001G453000 Sobic001G453000 Sobic010G089800--Sobic001G453000 Sobic001G451300 Sobic001G451300 Sobic010G089800--Sobic001G451300 Sobic001G004400 Sobic001G004400 Sobic010G089800--Sobic001G004400 Sobic010G188000 Sobic010G188000 Sobic010G089800--Sobic010G188000 Sobic001G248100 Sobic001G248100 Sobic010G089800--Sobic001G248100 Sobic006G169500 Sobic006G169500 Sobic010G089800--Sobic006G169500
Octagon: transcription factors


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