Gene annotation
Transcriptome id Sobic.010G087300.3,Sobic.010G087300.2,Sobic.010G087300.1
Synonym Sb10g007560
Functional annotation LMBR1 integral membrane protein, putative, expressed
UniProt A0A1W0VS09 , A0A1W0VS12 , A0A1W0VRZ8
Pfam PF04791
Panther DB PTHR21355 PTHR21355:SF2
NCBI CDD KOG2296; Integral membrane protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G65290 : LMBR1-like membrane protein
RAP-DB (Rice) LOC_Os06g11520.1 : LMBR1 integral membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a042548
Brachypodium PNT76202 , KQK01813 , KQK18968 , KQK18967 , KQK18966 , KQK18965 , KQK18964 , KQK18963 , KQK18962 , KQK18961 , KQK18969
Barley HORVU7Hr1G036420.5 , HORVU6Hr1G026540.1 , HORVU4Hr1G060680.2 , HORVU4Hr1G060680.3 , HORVU4Hr1G060680.4 , HORVU7Hr1G036420.10 , HORVU7Hr1G036420.11 , HORVU7Hr1G036420.12 , HORVU7Hr1G036420.13 , HORVU7Hr1G036420.14 , HORVU4Hr1G060680.1 , HORVU4Hr1G060680.5 , HORVU7Hr1G036420.4 , HORVU7Hr1G036420.9 , HORVU7Hr1G036420.3 , HORVU7Hr1G036420.6 , HORVU7Hr1G036420.7
Wheat TraesCS6A02G316100 , TraesCS7D02G178400 , TraesCS6D02G295300 , TraesCS7A02G177100 , TraesCS7B02G082100 , TraesCS6B02G346500 , TraesCS6B02G346500
Populus PNT35355 , PNT28045


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G058300 AP2 domain containing protein, expressed -
2 Sobic.001G235800 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.007G108700 expressed protein -
4 Sobic.009G057000 basic helix-loop-helix, putative, expressed -
5 Sobic.003G404600 regulatory protein, putative, expressed -
6 Sobic.010G241700 - -
7 Sobic.004G078800 transcription factor, putative, expressed K14431: transcription factor TGA
8 Sobic.001G021900 hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
9 Sobic.003G152200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.009G072900 calmodulin-binding protein, putative, expressed -
11 Sobic.002G128300 MLA6 protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
12 Sobic.001G006101 - -
13 Sobic.001G492100 lactose permease-related, putative, expressed -
14 Sobic.002G196100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.006G277550 - K00430: peroxidase
16 Sobic.006G250400 expressed protein -
17 Sobic.006G243600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.001G108800 expressed protein -
19 Sobic.007G151300 Cupin domain containing protein, expressed -
20 Sobic.001G375200 DUF567 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G087300 Sobic010G087300 Sobic007G058300 Sobic007G058300 Sobic010G087300--Sobic007G058300 Sobic001G235800 Sobic001G235800 Sobic010G087300--Sobic001G235800 Sobic007G108700 Sobic007G108700 Sobic010G087300--Sobic007G108700 Sobic009G057000 Sobic009G057000 Sobic010G087300--Sobic009G057000 Sobic003G404600 Sobic003G404600 Sobic010G087300--Sobic003G404600 Sobic010G241700 Sobic010G241700 Sobic010G087300--Sobic010G241700 Sobic004G078800 Sobic004G078800 Sobic010G087300--Sobic004G078800 Sobic001G021900 Sobic001G021900 Sobic010G087300--Sobic001G021900 Sobic003G152200 Sobic003G152200 Sobic010G087300--Sobic003G152200 Sobic006G277550 Sobic006G277550 Sobic007G058300--Sobic006G277550 Sobic009G072900 Sobic009G072900 Sobic007G058300--Sobic009G072900 Sobic005G206601 Sobic005G206601 Sobic007G058300--Sobic005G206601 Sobic002G375400 Sobic002G375400 Sobic007G058300--Sobic002G375400 Sobic005G213200 Sobic005G213200 Sobic007G058300--Sobic005G213200 Sobic001G403000 Sobic001G403000 Sobic007G058300--Sobic001G403000 Sobic002G247600 Sobic002G247600 Sobic007G058300--Sobic002G247600 Sobic009G120000 Sobic009G120000 Sobic007G058300--Sobic009G120000 Sobic002G310600 Sobic002G310600 Sobic007G058300--Sobic002G310600 Sobic010G252500 Sobic010G252500 Sobic001G235800--Sobic010G252500 Sobic004G159733 Sobic004G159733 Sobic001G235800--Sobic004G159733 Sobic010G206800 Sobic010G206800 Sobic001G235800--Sobic010G206800 Sobic001G235800--Sobic003G404600 Sobic004G062500 Sobic004G062500 Sobic001G235800--Sobic004G062500 Sobic005G018700 Sobic005G018700 Sobic001G235800--Sobic005G018700 Sobic010G185000 Sobic010G185000 Sobic001G235800--Sobic010G185000 Sobic010G268400 Sobic010G268400 Sobic001G235800--Sobic010G268400 Sobic003G366600 Sobic003G366600 Sobic001G235800--Sobic003G366600 Sobic004G011100 Sobic004G011100 Sobic007G108700--Sobic004G011100 Sobic003G139300 Sobic003G139300 Sobic007G108700--Sobic003G139300 Sobic003G368600 Sobic003G368600 Sobic007G108700--Sobic003G368600 Sobic007G108700--Sobic001G021900 Sobic002G356500 Sobic002G356500 Sobic007G108700--Sobic002G356500 Sobic001G075300 Sobic001G075300 Sobic007G108700--Sobic001G075300 Sobic002G235500 Sobic002G235500 Sobic007G108700--Sobic002G235500 Sobic010G204200 Sobic010G204200 Sobic007G108700--Sobic010G204200 Sobic003G024900 Sobic003G024900 Sobic007G108700--Sobic003G024900 Sobic002G200300 Sobic002G200300 Sobic009G057000--Sobic002G200300 Sobic001G341550 Sobic001G341550 Sobic009G057000--Sobic001G341550 Sobic002G128300 Sobic002G128300 Sobic009G057000--Sobic002G128300 Sobic001G133532 Sobic001G133532 Sobic009G057000--Sobic001G133532 Sobic001G243500 Sobic001G243500 Sobic009G057000--Sobic001G243500 Sobic009G158700 Sobic009G158700 Sobic009G057000--Sobic009G158700 Sobic001G243600 Sobic001G243600 Sobic009G057000--Sobic001G243600 Sobic004G273400 Sobic004G273400 Sobic009G057000--Sobic004G273400 Sobic001G100700 Sobic001G100700 Sobic009G057000--Sobic001G100700 Sobic006G059700 Sobic006G059700 Sobic003G404600--Sobic006G059700 Sobic003G404600--Sobic003G366600 Sobic001G147900 Sobic001G147900 Sobic003G404600--Sobic001G147900 Sobic003G404600--Sobic010G185000 Sobic006G197100 Sobic006G197100 Sobic003G404600--Sobic006G197100 Sobic004G227800 Sobic004G227800 Sobic003G404600--Sobic004G227800 Sobic004G024100 Sobic004G024100 Sobic003G404600--Sobic004G024100 Sobic004G348400 Sobic004G348400 Sobic003G404600--Sobic004G348400 Sobic004G349125 Sobic004G349125 Sobic003G404600--Sobic004G349125 Sobic006G256900 Sobic006G256900 Sobic010G241700--Sobic006G256900 Sobic001G438200 Sobic001G438200 Sobic010G241700--Sobic001G438200 Sobic001G062500 Sobic001G062500 Sobic010G241700--Sobic001G062500 Sobic010G148800 Sobic010G148800 Sobic010G241700--Sobic010G148800 Sobic007G100700 Sobic007G100700 Sobic010G241700--Sobic007G100700 Sobic001G058300 Sobic001G058300 Sobic010G241700--Sobic001G058300 Sobic003G319400 Sobic003G319400 Sobic010G241700--Sobic003G319400 Sobic006G106900 Sobic006G106900 Sobic010G241700--Sobic006G106900 Sobic009G181600 Sobic009G181600 Sobic010G241700--Sobic009G181600 Sobic010G192432 Sobic010G192432 Sobic004G078800--Sobic010G192432 Sobic010G192366 Sobic010G192366 Sobic004G078800--Sobic010G192366 Sobic001G483600 Sobic001G483600 Sobic004G078800--Sobic001G483600 Sobic010G069900 Sobic010G069900 Sobic004G078800--Sobic010G069900 Sobic003G095400 Sobic003G095400 Sobic004G078800--Sobic003G095400 Sobic010G071400 Sobic010G071400 Sobic004G078800--Sobic010G071400 Sobic003G227700 Sobic003G227700 Sobic004G078800--Sobic003G227700 Sobic004G177000 Sobic004G177000 Sobic004G078800--Sobic004G177000 Sobic002G318200 Sobic002G318200 Sobic004G078800--Sobic002G318200 Sobic001G021900--Sobic002G235500 Sobic003G117600 Sobic003G117600 Sobic001G021900--Sobic003G117600 Sobic001G021900--Sobic003G139300 Sobic001G325400 Sobic001G325400 Sobic001G021900--Sobic001G325400 Sobic009G035200 Sobic009G035200 Sobic001G021900--Sobic009G035200 Sobic001G021900--Sobic010G185000 Sobic001G119000 Sobic001G119000 Sobic001G021900--Sobic001G119000 Sobic001G082600 Sobic001G082600 Sobic001G021900--Sobic001G082600 Sobic006G092500 Sobic006G092500 Sobic001G021900--Sobic006G092500 Sobic003G152200--Sobic006G256900 Sobic003G152200--Sobic001G147900 Sobic002G042200 Sobic002G042200 Sobic003G152200--Sobic002G042200 Sobic003G152200--Sobic004G024100 Sobic005G065900 Sobic005G065900 Sobic003G152200--Sobic005G065900 Sobic003G152200--Sobic003G404600 Sobic003G015300 Sobic003G015300 Sobic003G152200--Sobic003G015300 Sobic003G152200--Sobic003G368600 Sobic006G243600 Sobic006G243600 Sobic003G152200--Sobic006G243600
Octagon: transcription factors


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