Gene annotation
Transcriptome id Sobic.010G136250.1
Synonym -
Functional annotation -
UniProt A0A1W0VSX2
Pfam PF03360
Panther DB PTHR10896 PTHR10896:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0015018galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity


Orthologs (automatic annotation)
TAIR AT1G27600 : Nucleotide-diphospho-sugar transferases superfamily protein
RAP-DB (Rice) LOC_Os03g17850.1 : glycosyltransferase family 43 protein, putative, expressed
MaizeGDB (Corn) Zm00025a038195 , Zm00025a040749
Brachypodium -
Barley HORVU1Hr1G013190.1 , HORVU1Hr1G013190.3 , HORVU1Hr1G013190.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G033900 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
2 Sobic.003G361400 nsp1-like C-terminal region family protein, expressed K14306: NUP62, nuclear pore complex protein Nup62
3 Sobic.007G017200 OsFBX142 - F-box domain containing protein, expressed -
4 Sobic.003G259600 ORC4 - Putative origin recognition complex subunit 4, expressed K02606: origin recognition complex subunit 4
5 Sobic.001G300900 expansin precursor, putative, expressed -
6 Sobic.002G372500 exportin 1, putative, expressed K14288: exportin-T
7 Sobic.001G461300 PPR repeat domain containing protein, putative, expressed -
8 Sobic.003G049600 CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
9 Sobic.010G032300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
10 Sobic.006G262501 - -
11 Sobic.006G140400 DNA mismatch repair protein, putative, expressed -
12 Sobic.002G208400 regulator protein, putative, expressed -
13 Sobic.006G274100 ribosome biogenesis regulatory protein, putative, expressed K14852: regulator of ribosome biosynthesis
14 Sobic.008G164700 - -
15 Sobic.005G108000 - -
16 Sobic.003G360300 exostosin family domain containing protein, expressed -
17 Sobic.004G289400 mitochondrial carrier protein, putative, expressed -
18 Sobic.009G134900 PPR repeat domain containing protein, putative, expressed -
19 Sobic.002G369701 - K06877: DEAD/DEAH box helicase domain-containing protein
20 Sobic.003G331000 exostosin family domain containing protein, expressed -


Gene co-expression network
sample Sobic010G136250 Sobic010G136250 Sobic001G033900 Sobic001G033900 Sobic010G136250--Sobic001G033900 Sobic003G361400 Sobic003G361400 Sobic010G136250--Sobic003G361400 Sobic007G017200 Sobic007G017200 Sobic010G136250--Sobic007G017200 Sobic003G259600 Sobic003G259600 Sobic010G136250--Sobic003G259600 Sobic001G300900 Sobic001G300900 Sobic010G136250--Sobic001G300900 Sobic002G372500 Sobic002G372500 Sobic010G136250--Sobic002G372500 Sobic001G461300 Sobic001G461300 Sobic010G136250--Sobic001G461300 Sobic003G049600 Sobic003G049600 Sobic010G136250--Sobic003G049600 Sobic010G032300 Sobic010G032300 Sobic010G136250--Sobic010G032300 Sobic001G033900--Sobic007G017200 Sobic001G033900--Sobic003G259600 Sobic001G013300 Sobic001G013300 Sobic001G033900--Sobic001G013300 Sobic001G033900--Sobic003G361400 Sobic001G033900--Sobic010G136250 Sobic006G140400 Sobic006G140400 Sobic001G033900--Sobic006G140400 Sobic003G360300 Sobic003G360300 Sobic001G033900--Sobic003G360300 Sobic005G108000 Sobic005G108000 Sobic001G033900--Sobic005G108000 Sobic001G334100 Sobic001G334100 Sobic001G033900--Sobic001G334100 Sobic003G361400--Sobic003G259600 Sobic001G373000 Sobic001G373000 Sobic003G361400--Sobic001G373000 Sobic002G219900 Sobic002G219900 Sobic003G361400--Sobic002G219900 Sobic004G038100 Sobic004G038100 Sobic003G361400--Sobic004G038100 Sobic003G361400--Sobic001G013300 Sobic002G043000 Sobic002G043000 Sobic003G361400--Sobic002G043000 Sobic003G361400--Sobic001G033900 Sobic003G361400--Sobic002G372500 Sobic003G361400--Sobic003G360300 Sobic007G017200--Sobic001G033900 Sobic007G017200--Sobic006G140400 Sobic001G004100 Sobic001G004100 Sobic007G017200--Sobic001G004100 Sobic004G031300 Sobic004G031300 Sobic007G017200--Sobic004G031300 Sobic007G017200--Sobic001G013300 Sobic006G245900 Sobic006G245900 Sobic007G017200--Sobic006G245900 Sobic007G017200--Sobic003G259600 Sobic007G016900 Sobic007G016900 Sobic007G017200--Sobic007G016900 Sobic004G020100 Sobic004G020100 Sobic007G017200--Sobic004G020100 Sobic003G259600--Sobic003G361400 Sobic003G259600--Sobic003G360300 Sobic003G259600--Sobic001G373000 Sobic003G331000 Sobic003G331000 Sobic003G259600--Sobic003G331000 Sobic003G259600--Sobic004G038100 Sobic010G269300 Sobic010G269300 Sobic003G259600--Sobic010G269300 Sobic003G028400 Sobic003G028400 Sobic003G259600--Sobic003G028400 Sobic002G142700 Sobic002G142700 Sobic003G259600--Sobic002G142700 Sobic003G259600--Sobic001G334100 Sobic002G162500 Sobic002G162500 Sobic001G300900--Sobic002G162500 Sobic006G208400 Sobic006G208400 Sobic001G300900--Sobic006G208400 Sobic006G269800 Sobic006G269800 Sobic001G300900--Sobic006G269800 Sobic001G300900--Sobic003G361400 Sobic004G119400 Sobic004G119400 Sobic001G300900--Sobic004G119400 Sobic007G011600 Sobic007G011600 Sobic001G300900--Sobic007G011600 Sobic008G088842 Sobic008G088842 Sobic001G300900--Sobic008G088842 Sobic003G341700 Sobic003G341700 Sobic001G300900--Sobic003G341700 Sobic008G017100 Sobic008G017100 Sobic001G300900--Sobic008G017100 Sobic001G429600 Sobic001G429600 Sobic002G372500--Sobic001G429600 Sobic002G372500--Sobic001G461300 Sobic003G052800 Sobic003G052800 Sobic002G372500--Sobic003G052800 Sobic002G372500--Sobic001G373000 Sobic002G372500--Sobic006G269800 Sobic001G451300 Sobic001G451300 Sobic002G372500--Sobic001G451300 Sobic010G174700 Sobic010G174700 Sobic002G372500--Sobic010G174700 Sobic008G147200 Sobic008G147200 Sobic002G372500--Sobic008G147200 Sobic003G199300 Sobic003G199300 Sobic002G372500--Sobic003G199300 Sobic001G461300--Sobic002G372500 Sobic006G193300 Sobic006G193300 Sobic001G461300--Sobic006G193300 Sobic001G408600 Sobic001G408600 Sobic001G461300--Sobic001G408600 Sobic006G002800 Sobic006G002800 Sobic001G461300--Sobic006G002800 Sobic009G234700 Sobic009G234700 Sobic001G461300--Sobic009G234700 Sobic002G371600 Sobic002G371600 Sobic001G461300--Sobic002G371600 Sobic007G089800 Sobic007G089800 Sobic001G461300--Sobic007G089800 Sobic001G461300--Sobic001G373000 Sobic004G224600 Sobic004G224600 Sobic001G461300--Sobic004G224600 Sobic009G257500 Sobic009G257500 Sobic003G049600--Sobic009G257500 Sobic004G278900 Sobic004G278900 Sobic003G049600--Sobic004G278900 Sobic009G254000 Sobic009G254000 Sobic003G049600--Sobic009G254000 Sobic003G298900 Sobic003G298900 Sobic003G049600--Sobic003G298900 Sobic001G395200 Sobic001G395200 Sobic003G049600--Sobic001G395200 Sobic009G032200 Sobic009G032200 Sobic003G049600--Sobic009G032200 Sobic002G335500 Sobic002G335500 Sobic003G049600--Sobic002G335500 Sobic007G125700 Sobic007G125700 Sobic003G049600--Sobic007G125700 Sobic002G006100 Sobic002G006100 Sobic003G049600--Sobic002G006100 Sobic004G342300 Sobic004G342300 Sobic010G032300--Sobic004G342300 Sobic010G032300--Sobic006G140400 Sobic006G274100 Sobic006G274100 Sobic010G032300--Sobic006G274100 Sobic010G224700 Sobic010G224700 Sobic010G032300--Sobic010G224700 Sobic006G059500 Sobic006G059500 Sobic010G032300--Sobic006G059500 Sobic002G132600 Sobic002G132600 Sobic010G032300--Sobic002G132600 Sobic009G211200 Sobic009G211200 Sobic010G032300--Sobic009G211200 Sobic010G032300--Sobic003G259600 Sobic005G028300 Sobic005G028300 Sobic010G032300--Sobic005G028300
Octagon: transcription factors


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