Gene annotation
Transcriptome id Sobic.010G217400.2
Synonym SRF8, Sb10g026340
Functional annotation STRUBBELIG-RECEPTOR FAMILY 3 precursor, putative, expressed
UniProt A0A1W0VU59
Pfam PF08263 PF13855 PF00069
Panther DB PTHR27001 PTHR27001:SF101
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G20850 : STRUBBELIG-receptor family 1
RAP-DB (Rice) LOC_Os06g45020.1 : STRUBBELIG-RECEPTOR FAMILY 3 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a041991 , Zm00025a051658
Brachypodium KQK16945 , KQK16944
Barley HORVU7Hr1G110200.20 , HORVU7Hr1G110200.21 , HORVU7Hr1G110200.22 , HORVU7Hr1G110200.23 , HORVU7Hr1G110200.24 , HORVU7Hr1G110200.25 , HORVU7Hr1G110200.26 , HORVU7Hr1G110200.27 , HORVU7Hr1G110200.28 , HORVU2Hr1G039960.3 , HORVU2Hr1G039960.6 , HORVU7Hr1G110200.15 , HORVU7Hr1G110200.14 , HORVU7Hr1G110200.17 , HORVU7Hr1G110200.16 , HORVU7Hr1G110200.11 , HORVU7Hr1G110200.10 , HORVU7Hr1G110200.13 , HORVU7Hr1G110200.12 , HORVU7Hr1G110200.19 , HORVU7Hr1G110200.18 , HORVU0Hr1G029480.1 , HORVU2Hr1G039960.2 , HORVU2Hr1G039960.8 , HORVU2Hr1G039960.7 , HORVU2Hr1G039960.1 , HORVU2Hr1G039960.13 , HORVU2Hr1G039960.12 , HORVU2Hr1G039960.11 , HORVU2Hr1G039960.10 , HORVU2Hr1G039960.16 , HORVU2Hr1G039960.5 , HORVU2Hr1G039960.4 , HORVU7Hr1G110200.1 , HORVU7Hr1G110200.3 , HORVU7Hr1G110200.2 , HORVU7Hr1G110200.5 , HORVU7Hr1G110200.4 , HORVU7Hr1G110200.7 , HORVU7Hr1G110200.6 , HORVU7Hr1G110200.9 , HORVU7Hr1G110200.8
Wheat TraesCS7B02G395000 , TraesCS7B02G395000 , TraesCS7B02G395000 , TraesCS7D02G477500 , TraesCS7A02G491200 , TraesCS7A02G491200 , TraesCS7D02G477500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G524200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
2 Sobic.006G028200 glycine-rich protein, putative, expressed -
3 Sobic.002G161000 RNA recognition motif containing protein, expressed -
4 Sobic.004G325400 cyclic nucleotide-gated ion channel 14, putative, expressed K05391: cyclic nucleotide gated channel, plant
5 Sobic.010G189000 protein with a conserved N-terminal region, putative, expressed -
6 Sobic.001G252700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLA2 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
7 Sobic.006G046700 vacuolar protein sorting-associated protein 11, putative, expressed -
8 Sobic.007G130600 methylcrotonoyl-CoA carboxylase beta chain, mitochondrial precursor, putative, expressed K01969: 3-methylcrotonyl-CoA carboxylase beta subunit
9 Sobic.003G401000 adaptin, putative, expressed K12400: AP-4 complex subunit epsilon-1
10 Sobic.006G058600 AML1, putative, expressed -
11 Sobic.007G208600 leucine rich repeat containing protein, expressed -
12 Sobic.002G010800 NBS-LRR disease resistance protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
13 Sobic.010G069100 expressed protein -
14 Sobic.001G094000 expressed protein -
15 Sobic.002G303000 disease resistant protein, identical, putative, expressed -
16 Sobic.009G257800 sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
17 Sobic.004G027100 ADP-ribosylation factor, putative, expressed K07977: Arf/Sar family, other
18 Sobic.009G040700 "OsPPKL2(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659919)@serine/threonine protein phosphatase, putative, expressed K01090: protein phosphatase
19 Sobic.006G114500 per1-like family protein, putative, expressed -
20 Sobic.003G036900 glycine-rich protein, putative, expressed -


Gene co-expression network
sample Sobic010G217400 Sobic010G217400 Sobic001G524200 Sobic001G524200 Sobic010G217400--Sobic001G524200 Sobic006G028200 Sobic006G028200 Sobic010G217400--Sobic006G028200 Sobic002G161000 Sobic002G161000 Sobic010G217400--Sobic002G161000 Sobic004G325400 Sobic004G325400 Sobic010G217400--Sobic004G325400 Sobic010G189000 Sobic010G189000 Sobic010G217400--Sobic010G189000 Sobic001G252700 Sobic001G252700 Sobic010G217400--Sobic001G252700 Sobic006G046700 Sobic006G046700 Sobic010G217400--Sobic006G046700 Sobic007G130600 Sobic007G130600 Sobic010G217400--Sobic007G130600 Sobic003G401000 Sobic003G401000 Sobic010G217400--Sobic003G401000 Sobic004G027100 Sobic004G027100 Sobic001G524200--Sobic004G027100 Sobic001G524200--Sobic010G217400 Sobic001G524200--Sobic007G130600 Sobic003G145900 Sobic003G145900 Sobic001G524200--Sobic003G145900 Sobic005G007800 Sobic005G007800 Sobic001G524200--Sobic005G007800 Sobic010G078100 Sobic010G078100 Sobic001G524200--Sobic010G078100 Sobic006G114500 Sobic006G114500 Sobic001G524200--Sobic006G114500 Sobic002G303000 Sobic002G303000 Sobic001G524200--Sobic002G303000 Sobic009G121100 Sobic009G121100 Sobic001G524200--Sobic009G121100 Sobic006G028200--Sobic003G401000 Sobic001G094000 Sobic001G094000 Sobic006G028200--Sobic001G094000 Sobic009G040700 Sobic009G040700 Sobic006G028200--Sobic009G040700 Sobic006G028200--Sobic010G189000 Sobic003G187400 Sobic003G187400 Sobic006G028200--Sobic003G187400 Sobic006G028200--Sobic006G046700 Sobic001G296500 Sobic001G296500 Sobic006G028200--Sobic001G296500 Sobic003G036900 Sobic003G036900 Sobic006G028200--Sobic003G036900 Sobic001G477800 Sobic001G477800 Sobic006G028200--Sobic001G477800 Sobic001G206100 Sobic001G206100 Sobic002G161000--Sobic001G206100 Sobic007G137900 Sobic007G137900 Sobic002G161000--Sobic007G137900 Sobic003G200200 Sobic003G200200 Sobic002G161000--Sobic003G200200 Sobic002G161000--Sobic001G094000 Sobic001G257300 Sobic001G257300 Sobic002G161000--Sobic001G257300 Sobic003G170100 Sobic003G170100 Sobic002G161000--Sobic003G170100 Sobic001G306900 Sobic001G306900 Sobic002G161000--Sobic001G306900 Sobic002G161000--Sobic006G046700 Sobic001G251700 Sobic001G251700 Sobic002G161000--Sobic001G251700 Sobic009G257800 Sobic009G257800 Sobic004G325400--Sobic009G257800 Sobic007G027700 Sobic007G027700 Sobic004G325400--Sobic007G027700 Sobic007G009400 Sobic007G009400 Sobic004G325400--Sobic007G009400 Sobic003G401100 Sobic003G401100 Sobic004G325400--Sobic003G401100 Sobic001G143500 Sobic001G143500 Sobic004G325400--Sobic001G143500 Sobic004G021200 Sobic004G021200 Sobic004G325400--Sobic004G021200 Sobic004G325400--Sobic003G401000 Sobic004G072100 Sobic004G072100 Sobic004G325400--Sobic004G072100 Sobic008G127400 Sobic008G127400 Sobic004G325400--Sobic008G127400 Sobic010G189000--Sobic006G028200 Sobic007G079200 Sobic007G079200 Sobic010G189000--Sobic007G079200 Sobic010G189000--Sobic001G094000 Sobic010G189000--Sobic009G040700 Sobic006G183800 Sobic006G183800 Sobic010G189000--Sobic006G183800 Sobic002G288000 Sobic002G288000 Sobic010G189000--Sobic002G288000 Sobic004G282400 Sobic004G282400 Sobic010G189000--Sobic004G282400 Sobic010G189000--Sobic006G046700 Sobic004G061900 Sobic004G061900 Sobic010G189000--Sobic004G061900 Sobic006G211500 Sobic006G211500 Sobic001G252700--Sobic006G211500 Sobic001G252700--Sobic010G189000 Sobic004G213000 Sobic004G213000 Sobic001G252700--Sobic004G213000 Sobic001G252700--Sobic006G046700 Sobic001G252700--Sobic003G036900 Sobic001G252700--Sobic001G257300 Sobic007G095200 Sobic007G095200 Sobic001G252700--Sobic007G095200 Sobic001G252700--Sobic001G206100 Sobic001G252700--Sobic006G028200 Sobic008G153000 Sobic008G153000 Sobic006G046700--Sobic008G153000 Sobic004G031700 Sobic004G031700 Sobic006G046700--Sobic004G031700 Sobic007G026000 Sobic007G026000 Sobic006G046700--Sobic007G026000 Sobic006G046700--Sobic001G206100 Sobic006G046700--Sobic001G306900 Sobic003G445400 Sobic003G445400 Sobic006G046700--Sobic003G445400 Sobic001G425000 Sobic001G425000 Sobic006G046700--Sobic001G425000 Sobic001G405300 Sobic001G405300 Sobic006G046700--Sobic001G405300 Sobic006G013500 Sobic006G013500 Sobic006G046700--Sobic006G013500 Sobic001G194900 Sobic001G194900 Sobic007G130600--Sobic001G194900 Sobic005G181000 Sobic005G181000 Sobic007G130600--Sobic005G181000 Sobic008G160700 Sobic008G160700 Sobic007G130600--Sobic008G160700 Sobic006G124900 Sobic006G124900 Sobic007G130600--Sobic006G124900 Sobic005G177800 Sobic005G177800 Sobic007G130600--Sobic005G177800 Sobic009G027000 Sobic009G027000 Sobic007G130600--Sobic009G027000 Sobic010G001600 Sobic010G001600 Sobic007G130600--Sobic010G001600 Sobic009G083900 Sobic009G083900 Sobic007G130600--Sobic009G083900 Sobic007G078000 Sobic007G078000 Sobic007G130600--Sobic007G078000 Sobic002G158700 Sobic002G158700 Sobic003G401000--Sobic002G158700 Sobic003G401000--Sobic003G187400 Sobic002G157300 Sobic002G157300 Sobic003G401000--Sobic002G157300 Sobic003G401000--Sobic009G257800 Sobic001G155000 Sobic001G155000 Sobic003G401000--Sobic001G155000 Sobic003G401000--Sobic009G040700 Sobic003G401000--Sobic001G094000 Sobic003G401000--Sobic006G028200 Sobic003G008500 Sobic003G008500 Sobic003G401000--Sobic003G008500
Octagon: transcription factors


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